CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp10 : Mut = T12del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1012T12delT4265deldelACT---2121113058-13060

Details of the mutation T12del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1012T12delACT---2121All0.000004
ORF1ab/nsp1012T12delACT---55B.1.1.70.000004
ORF1ab/nsp1012T12delACT---11AY.190.00114
ORF1ab/nsp1012T12delACT---11AY.4.50.000107
ORF1ab/nsp1012T12delACT---11AY.720.001361
ORF1ab/nsp1012T12delACT---11B.1.1.10.000327
ORF1ab/nsp1012T12delACT---11B.1.1.3480.000796
ORF1ab/nsp1012T12delACT---11B.1.1.370.000193
ORF1ab/nsp1012T12delACT---11B.1.1770.000013
ORF1ab/nsp1012T12delACT---11B.1.177.100.000878
ORF1ab/nsp1012T12delACT---11B.1.177.830.001481
ORF1ab/nsp1012T12delACT---11B.1.3110.000275
ORF1ab/nsp1012T12delACT---11B.1.4150.014286
ORF1ab/nsp1012T12delACT---11B.1.617.10.000129
ORF1ab/nsp1012T12delACT---11B.1.617.20.000004
ORF1ab/nsp1012T12delACT---11B.1.6300.005236
ORF1ab/nsp1012T12delACT---11C.170.055556
ORF1ab/nsp1012T12delACT---11N.40.004255