CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp10 : Mut = T12S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1012T12ST4265SnonsynaCtaGt1271200.94488213058-13060
ORF1ab/nsp1012T12ST4265SnonsynActTct12770.055118113058-13060

Details of the mutation T12S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1012T12SaCtaGt120127All0.000023
ORF1ab/nsp1012T12SActTct7127All0.000001
ORF1ab/nsp1012T12SaCtaGt109109AY.40.00017
ORF1ab/nsp1012T12SaCtaGt77AY.430.000031
ORF1ab/nsp1012T12SActTct33B.10.000027
ORF1ab/nsp1012T12SActTct12B.1.1.70.000001
ORF1ab/nsp1012T12SaCtaGt12B.1.1.70.000001
ORF1ab/nsp1012T12SActTct22B.1.5260.000047
ORF1ab/nsp1012T12SaCtaGt22B.1.617.20.000008
ORF1ab/nsp1012T12SaCtaGt11AY.4.50.000107
ORF1ab/nsp1012T12SActTct11B.1.1770.000013