CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp10 | 102 | T102I | T4355I | nonsyn | aCt | aTt | 11552 | 11552 | 1 | 13328-13330 |
Details of the mutation T102I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 11552 | 11552 | All | 0.002209 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 3562 | 3562 | B.1.1.7 | 0.003189 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 3241 | 3241 | P.1.10 | 0.87335 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1364 | 1364 | AY.4 | 0.002123 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 321 | 321 | B.1.617.2 | 0.001209 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 256 | 256 | B.1.526 | 0.006017 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 192 | 192 | AY.43 | 0.000851 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 192 | 192 | B.1.177.56 | 0.128171 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 178 | 178 | AY.103 | 0.001105 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 173 | 173 | P.1 | 0.002725 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 121 | 121 | P.1.16 | 0.045267 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 101 | 101 | AY.3 | 0.001005 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 94 | 94 | AY.44 | 0.000572 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 86 | 86 | P.1.10.1 | 0.699187 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 79 | 79 | B.1.351 | 0.002348 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 53 | 53 | AY.5 | 0.001094 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 53 | 53 | B.1 | 0.000485 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 46 | 46 | AY.25 | 0.000277 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 45 | 45 | AY.29 | 0.00071 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 44 | 44 | B.1.2 | 0.000387 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 42 | 42 | B.1.561 | 0.016673 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 41 | 41 | B.1.177 | 0.00054 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 40 | 40 | AY.9.1 | 0.003349 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 38 | 38 | B.1.429 | 0.000894 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 37 | 37 | AY.102 | 0.000981 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 37 | 37 | B.1.1 | 0.000671 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 34 | 34 | AY.119 | 0.0012 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 33 | 33 | B.1.160 | 0.001029 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 32 | 32 | AY.100 | 0.001472 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 29 | 29 | B.1.637 | 0.002119 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 25 | 25 | AY.39 | 0.000618 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 23 | 23 | AY.34 | 0.00223 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 23 | 23 | AY.4.5 | 0.002472 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 23 | 23 | P.1.10.2 | 0.958333 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 21 | 21 | B.1.258 | 0.001397 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 21 | 21 | P.1.14 | 0.001004 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 20 | 20 | AD.2 | 0.004379 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 20 | 20 | AY.4.2 | 0.000434 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 20 | 20 | B.1.177.55 | 0.04662 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 20 | 20 | C.37 | 0.002321 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 18 | 18 | AY.24 | 0.007759 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 18 | 18 | R.1 | 0.00162 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 16 | 16 | AY.120 | 0.000595 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 16 | 16 | B.6.2 | 1 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 15 | 15 | AY.117 | 0.001268 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 15 | 15 | AY.20 | 0.000583 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 15 | 15 | AY.47 | 0.000467 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 15 | 15 | B.1.1.519 | 0.000596 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 15 | 15 | Q.8 | 0.002474 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 14 | 14 | AY.34.1 | 0.007139 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 14 | 14 | AY.61 | 0.001467 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 14 | 14 | AY.98 | 0.001106 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 14 | 14 | B.1.427 | 0.000707 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 14 | 14 | Q.1 | 0.001769 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 13 | 13 | AY.99.2 | 0.001198 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 13 | 13 | W.4 | 0.017568 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 12 | 12 | B.1.621 | 0.001062 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 11 | 11 | AY.59 | 0.005826 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 10 | 10 | AT.1 | 0.051282 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 10 | 10 | AY.26 | 0.000283 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 10 | 10 | AY.75 | 0.00056 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 10 | 10 | B.1.234 | 0.001319 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 10 | 10 | B.1.609 | 0.004794 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 9 | 9 | AY.4.2.1 | 0.001341 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 9 | 9 | AY.5.3 | 0.003036 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 9 | 9 | AY.62 | 0.003922 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 8 | 8 | AY.118 | 0.000501 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 8 | 8 | AY.120.1 | 0.002568 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 8 | 8 | AY.42 | 0.000322 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 8 | 8 | AY.6 | 0.000329 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 8 | 8 | B.1.1.159 | 0.037383 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 8 | 8 | B.1.1.304 | 0.022472 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 8 | 8 | B.1.423 | 0.081633 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 8 | 8 | B.1.525 | 0.000905 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 8 | 8 | Q.7 | 0.008889 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 7 | 7 | AY.71 | 0.003325 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 7 | 7 | P.1.7 | 0.002235 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 6 | 6 | AY.16.1 | 0.00282 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 6 | 6 | AY.45 | 0.00073 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 6 | 6 | AY.98.1 | 0.000291 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 6 | 6 | B.1.1.214 | 0.000333 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 6 | 6 | B.1.131 | 0.052632 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 6 | 6 | B.1.596 | 0.000523 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 5 | 5 | AY.114 | 0.001156 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 5 | 5 | AY.79 | 0.006053 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 5 | 5 | AY.9 | 0.000338 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 5 | 5 | B.1.1.311 | 0.001791 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 5 | 5 | P.1.15 | 0.001162 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 4 | 4 | AY.3.1 | 0.000341 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 4 | 4 | AY.30 | 0.001583 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 4 | 4 | AY.46 | 0.000416 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 4 | 4 | AY.66 | 0.004278 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 4 | 4 | AY.69 | 0.000747 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 4 | 4 | AY.84 | 0.00175 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 4 | 4 | B.1.1.28 | 0.001245 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 4 | 4 | B.1.1.33 | 0.001684 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 4 | 4 | B.1.1.70 | 0.001364 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 4 | 4 | B.1.177.77 | 0.002905 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 4 | 4 | B.1.240 | 0.000862 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 4 | 4 | B.1.243 | 0.000278 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 4 | 4 | B.1.466.1 | 0.028777 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 4 | 4 | P.1.12 | 0.001936 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 4 | 4 | Q.2 | 0.002454 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 3 | 3 | AE.8 | 0.001467 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 3 | 3 | AY.13 | 0.000483 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 3 | 3 | AY.16 | 0.001139 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 3 | 3 | AY.23 | 0.000209 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 3 | 3 | AY.33 | 0.0002 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 3 | 3 | AY.46.6 | 0.000217 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 3 | 3 | AY.78 | 0.004622 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 3 | 3 | AY.85 | 0.001282 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 3 | 3 | B | 0.000383 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 3 | 3 | B.1.177.57 | 0.000843 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 3 | 3 | B.1.258.3 | 0.005025 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 3 | 3 | B.1.438.1 | 0.000322 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 3 | 3 | B.1.595.1 | 0.017544 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 3 | 3 | B.1.617.1 | 0.000387 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 3 | 3 | P.1.1 | 0.000953 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 3 | 3 | P.2 | 0.00056 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | AY.105 | 0.001286 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | AY.120.2.1 | 0.000997 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | AY.29.1 | 0.000441 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | AY.35 | 0.000466 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | AY.4.3 | 0.001684 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | AY.48 | 0.00093 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | AY.5.1 | 0.007519 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | AY.5.4 | 0.000553 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | AY.57 | 0.001312 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | AY.74 | 0.000231 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | AY.9.2 | 0.000073 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | AY.92 | 0.000575 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | AY.95 | 0.001522 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.1.222 | 0.000408 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.1.241 | 0.004141 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.1.284 | 0.000215 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.1.329 | 0.007692 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.139 | 0.001466 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.160.12 | 0.012821 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.177.81 | 0.000379 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.221 | 0.000142 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.232 | 0.001075 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.324 | 0.00321 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.351.2 | 0.000605 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.36.22 | 0.002415 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.369 | 0.00057 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.375 | 0.001639 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.396 | 0.001411 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.400 | 0.000858 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.466.2 | 0.000782 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.470 | 0.002809 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.492 | 0.014085 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.595 | 0.000522 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.619.1 | 0.001283 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | B.1.628 | 0.000705 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | C.36.3 | 0.001134 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | P.1.13 | 0.001797 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | P.1.17 | 0.000324 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 2 | 2 | Q.4 | 0.00091 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | A | 0.000387 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | A.2.2 | 0.001689 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | A.2.3 | 0.004739 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | A.6 | 0.005128 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.17 | 0.008197 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.2 | 0.000356 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.23.1 | 0.000417 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.39.2 | 0.001541 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.4.4 | 0.000409 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.40 | 0.000964 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.5.2 | 0.002463 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.70 | 0.000209 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.90 | 0.000684 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AY.96 | 0.002075 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | AZ.1 | 0.000867 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.1.123 | 0.017857 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.1.127 | 0.0625 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.1.219 | 0.005 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.1.27 | 0.00565 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.1.307 | 0.002532 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.1.322 | 0.008772 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.1.523 | 0.001563 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.1.528 | 0.004808 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.119 | 0.010526 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.128 | 0.000635 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.149 | 0.003425 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.151 | 0.011111 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.157 | 0.002985 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.160.14 | 0.002119 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.160.16 | 0.000929 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.160.7 | 0.002079 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.177.11 | 0.001698 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.177.12 | 0.000152 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.177.32 | 0.00135 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.177.52 | 0.001757 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.177.82 | 0.000477 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.177.87 | 0.000728 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.241 | 0.000812 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.265 | 0.001271 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.319 | 0.003049 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.335 | 0.010309 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.337 | 0.005587 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.36.19 | 0.009259 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.36.31 | 0.001751 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.36.35 | 0.002604 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.36.36 | 0.000602 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.361 | 0.001289 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.366 | 0.004878 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.389 | 0.001002 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.399 | 0.001934 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.453 | 0.003236 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.467 | 0.04 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.562 | 0.018519 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.580 | 0.004065 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.619 | 0.000871 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.1.631 | 0.003367 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | B.4 | 0.002208 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | C.1.2 | 0.004255 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | C.37.1 | 0.002618 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp10 | 102 | T102I | aCt | aTt | 1 | 1 | W.3 | 0.005263 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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