CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp10 : Mut = R134R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp10134R134RR4387RsyncgCcgT472246090.97606913424-13426
ORF1ab/nsp10134R134RR4387RsyncgCcgA47221050.022236313424-13426
ORF1ab/nsp10134R134RR4387RsyncgCcgG472270.0014824213424-13426
ORF1ab/nsp10134R134RR4387RsynCgCAgA472210.00021177513424-13426

Details of the mutation R134R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp10134R134RcgCcgT46094722All0.000882
ORF1ab/nsp10134R134RcgCcgA1054722All0.00002
ORF1ab/nsp10134R134RcgCcgG74722All0.000001
ORF1ab/nsp10134R134RCgCAgA14722All0
ORF1ab/nsp10134R134RcgCcgT16171653B.1.1.70.001448
ORF1ab/nsp10134R134RcgCcgA361653B.1.1.70.000032
ORF1ab/nsp10134R134RcgCcgT415415P.1.140.019837
ORF1ab/nsp10134R134RcgCcgT394401AY.40.000613
ORF1ab/nsp10134R134RcgCcgA7401AY.40.000011
ORF1ab/nsp10134R134RcgCcgT285285B.1.36.220.344203
ORF1ab/nsp10134R134RcgCcgT243245B.1.10.004408
ORF1ab/nsp10134R134RcgCcgG1245B.1.10.000018
ORF1ab/nsp10134R134RcgCcgA1245B.1.10.000018
ORF1ab/nsp10134R134RcgCcgT210210AY.1180.013156
ORF1ab/nsp10134R134RcgCcgT113113B.1.20.000995
ORF1ab/nsp10134R134RcgCcgT105110B.1.617.20.000395
ORF1ab/nsp10134R134RcgCcgG3110B.1.617.20.000011
ORF1ab/nsp10134R134RcgCcgA2110B.1.617.20.000008
ORF1ab/nsp10134R134RcgCcgT101101B.1.1.2510.801587
ORF1ab/nsp10134R134RcgCcgT5760B.1.4270.002878
ORF1ab/nsp10134R134RcgCcgA360B.1.4270.000151
ORF1ab/nsp10134R134RcgCcgT5253AY.30.000517
ORF1ab/nsp10134R134RcgCcgA153AY.30.00001
ORF1ab/nsp10134R134RcgCcgT5252AY.250.000313
ORF1ab/nsp10134R134RcgCcgT4447P.10.000693
ORF1ab/nsp10134R134RcgCcgA347P.10.000047
ORF1ab/nsp10134R134RcgCcgT4446B.10.000403
ORF1ab/nsp10134R134RcgCcgA246B.10.000018
ORF1ab/nsp10134R134RcgCcgT4344AY.1030.000267
ORF1ab/nsp10134R134RcgCcgA144AY.1030.000006
ORF1ab/nsp10134R134RcgCcgT4041B.1.2210.002841
ORF1ab/nsp10134R134RcgCcgA141B.1.2210.000071
ORF1ab/nsp10134R134RcgCcgT3237AY.440.000195
ORF1ab/nsp10134R134RcgCcgG337AY.440.000018
ORF1ab/nsp10134R134RcgCcgA237AY.440.000012
ORF1ab/nsp10134R134RcgCcgT3636AY.470.00112
ORF1ab/nsp10134R134RcgCcgT3535AY.1050.022508
ORF1ab/nsp10134R134RcgCcgA3233R.10.00288
ORF1ab/nsp10134R134RcgCcgT133R.10.00009
ORF1ab/nsp10134R134RcgCcgT3232AY.340.003103
ORF1ab/nsp10134R134RcgCcgT3232Q.80.005277
ORF1ab/nsp10134R134RcgCcgT2728B.1.1600.000842
ORF1ab/nsp10134R134RcgCcgA128B.1.1600.000031
ORF1ab/nsp10134R134RcgCcgT2627AY.200.00101
ORF1ab/nsp10134R134RcgCcgA127AY.200.000039
ORF1ab/nsp10134R134RcgCcgT2122AY.1020.000557
ORF1ab/nsp10134R134RCgCAgA122AY.1020.000027
ORF1ab/nsp10134R134RcgCcgT2222AY.430.000097
ORF1ab/nsp10134R134RcgCcgT2020B.1.1.5190.000794
ORF1ab/nsp10134R134RcgCcgT1818B.1.5960.001568
ORF1ab/nsp10134R134RcgCcgT1717AY.260.000481
ORF1ab/nsp10134R134RcgCcgT1717B.1.1.3690.007586
ORF1ab/nsp10134R134RcgCcgT1717B.1.1770.000224
ORF1ab/nsp10134R134RcgCcgT1616AY.390.000395
ORF1ab/nsp10134R134RcgCcgT1616AY.640.009524
ORF1ab/nsp10134R134RcgCcgT1515AY.90.001014
ORF1ab/nsp10134R134RcgCcgT1515B.1.6210.001328
ORF1ab/nsp10134R134RcgCcgT1314AY.230.000907
ORF1ab/nsp10134R134RcgCcgA114AY.230.00007
ORF1ab/nsp10134R134RcgCcgT1313B.1.258.170.001352
ORF1ab/nsp10134R134RcgCcgT1010AY.1160.002868
ORF1ab/nsp10134R134RcgCcgT1010AY.360.001482
ORF1ab/nsp10134R134RcgCcgT1010B.1.177.120.001517
ORF1ab/nsp10134R134RcgCcgT88C.370.000929
ORF1ab/nsp10134R134RcgCcgT77AY.1000.000322
ORF1ab/nsp10134R134RcgCcgT77AY.29.10.001544
ORF1ab/nsp10134R134RcgCcgA47AY.4.20.000087
ORF1ab/nsp10134R134RcgCcgT37AY.4.20.000065
ORF1ab/nsp10134R134RcgCcgT77AY.420.000282
ORF1ab/nsp10134R134RcgCcgT77B.1.360.001021
ORF1ab/nsp10134R134RcgCcgT77D.20.000525
ORF1ab/nsp10134R134RcgCcgT66AY.290.000095
ORF1ab/nsp10134R134RcgCcgT66AY.450.00073
ORF1ab/nsp10134R134RcgCcgT66B.1.1.2390.193548
ORF1ab/nsp10134R134RcgCcgT66B.1.2580.000399
ORF1ab/nsp10134R134RcgCcgT66B.1.3510.000178
ORF1ab/nsp10134R134RcgCcgT66B.1.4290.000141
ORF1ab/nsp10134R134RcgCcgT55AY.1190.000177
ORF1ab/nsp10134R134RcgCcgT55AY.1200.000186
ORF1ab/nsp10134R134RcgCcgT55AY.750.00028
ORF1ab/nsp10134R134RcgCcgT55B.1.2400.001078
ORF1ab/nsp10134R134RcgCcgT55B.1.5260.000118
ORF1ab/nsp10134R134RcgCcgT55B.1.6370.000365
ORF1ab/nsp10134R134RcgCcgT55P.1.170.000809
ORF1ab/nsp10134R134RcgCcgT44AY.1060.00134
ORF1ab/nsp10134R134RcgCcgT44AY.50.000083
ORF1ab/nsp10134R134RcgCcgT44AY.5.40.001107
ORF1ab/nsp10134R134RcgCcgT44AY.60.000165
ORF1ab/nsp10134R134RcgCcgT44AY.98.10.000194
ORF1ab/nsp10134R134RcgCcgT44B.1.1.1330.033898
ORF1ab/nsp10134R134RcgCcgT44B.1.1.1530.004381
ORF1ab/nsp10134R134RcgCcgT44B.1.1260.005102
ORF1ab/nsp10134R134RcgCcgT44B.1.617.10.000516
ORF1ab/nsp10134R134RcgCcgT33A.2.50.001497
ORF1ab/nsp10134R134RcgCcgT33AY.140.000264
ORF1ab/nsp10134R134RcgCcgT33AY.270.000194
ORF1ab/nsp10134R134RcgCcgA23AY.3.10.000171
ORF1ab/nsp10134R134RcgCcgT13AY.3.10.000085
ORF1ab/nsp10134R134RcgCcgT33AY.46.40.000494
ORF1ab/nsp10134R134RcgCcgT33AY.740.000347
ORF1ab/nsp10134R134RcgCcgT33AZ.20.002463
ORF1ab/nsp10134R134RcgCcgT33B.1.177.150.001893
ORF1ab/nsp10134R134RcgCcgT33B.1.240.10.075
ORF1ab/nsp10134R134RcgCcgT33B.1.2650.003812
ORF1ab/nsp10134R134RcgCcgT33B.1.5250.000339
ORF1ab/nsp10134R134RcgCcgT33B.1.5880.00273
ORF1ab/nsp10134R134RcgCcgT33P.1.120.001452
ORF1ab/nsp10134R134RcgCcgT22AY.100.00106
ORF1ab/nsp10134R134RcgCcgT22AY.1130.000285
ORF1ab/nsp10134R134RcgCcgT22AY.1170.000169
ORF1ab/nsp10134R134RcgCcgT22AY.1210.000271
ORF1ab/nsp10134R134RcgCcgA12AY.130.000161
ORF1ab/nsp10134R134RcgCcgT12AY.130.000161
ORF1ab/nsp10134R134RcgCcgT22AY.34.10.00102
ORF1ab/nsp10134R134RcgCcgT22AY.46.20.001271
ORF1ab/nsp10134R134RcgCcgT22AY.500.001599
ORF1ab/nsp10134R134RcgCcgT22AY.550.001835
ORF1ab/nsp10134R134RcgCcgT22AY.590.001059
ORF1ab/nsp10134R134RcgCcgT22AY.690.000373
ORF1ab/nsp10134R134RcgCcgT22AY.70.000392
ORF1ab/nsp10134R134RcgCcgT22AY.7.20.001119
ORF1ab/nsp10134R134RcgCcgT22AY.820.002714
ORF1ab/nsp10134R134RcgCcgT22AY.9.10.000167
ORF1ab/nsp10134R134RcgCcgT22AY.99.20.000184
ORF1ab/nsp10134R134RcgCcgT22AZ.30.00304
ORF1ab/nsp10134R134RcgCcgT22B.1.1.10.000653
ORF1ab/nsp10134R134RcgCcgT22B.1.1.2440.030769
ORF1ab/nsp10134R134RcgCcgT22B.1.1.3060.000877
ORF1ab/nsp10134R134RcgCcgT22B.1.1.3540.008772
ORF1ab/nsp10134R134RcgCcgT22B.1.1.700.000682
ORF1ab/nsp10134R134RcgCcgT22B.1.177.40.000422
ORF1ab/nsp10134R134RcgCcgT22B.1.177.430.002954
ORF1ab/nsp10134R134RcgCcgT22B.1.177.730.001133
ORF1ab/nsp10134R134RcgCcgT22B.1.2340.000264
ORF1ab/nsp10134R134RcgCcgT22B.1.2430.000139
ORF1ab/nsp10134R134RcgCcgT22B.1.258.20.009009
ORF1ab/nsp10134R134RcgCcgT22B.1.3110.000549
ORF1ab/nsp10134R134RcgCcgT22B.1.3670.001585
ORF1ab/nsp10134R134RcgCcgT22B.1.4040.002604
ORF1ab/nsp10134R134RcgCcgT22B.1.4990.002101
ORF1ab/nsp10134R134RcgCcgT22P.1.150.000465
ORF1ab/nsp10134R134RcgCcgT22P.1.70.000639
ORF1ab/nsp10134R134RcgCcgA11AY.1110.000183
ORF1ab/nsp10134R134RcgCcgT11AY.1140.000231
ORF1ab/nsp10134R134RcgCcgT11AY.116.10.000311
ORF1ab/nsp10134R134RcgCcgT11AY.160.00038
ORF1ab/nsp10134R134RcgCcgT11AY.170.008197
ORF1ab/nsp10134R134RcgCcgT11AY.280.00189
ORF1ab/nsp10134R134RcgCcgT11AY.4.2.10.000149
ORF1ab/nsp10134R134RcgCcgT11AY.4.30.000842
ORF1ab/nsp10134R134RcgCcgT11AY.4.40.000409
ORF1ab/nsp10134R134RcgCcgA11AY.4.50.000107
ORF1ab/nsp10134R134RcgCcgT11AY.460.000104
ORF1ab/nsp10134R134RcgCcgT11AY.5.30.000337
ORF1ab/nsp10134R134RcgCcgT11AY.540.000095
ORF1ab/nsp10134R134RcgCcgT11AY.610.000105
ORF1ab/nsp10134R134RcgCcgT11AY.630.000387
ORF1ab/nsp10134R134RcgCcgA11AY.730.000665
ORF1ab/nsp10134R134RcgCcgT11AY.770.001127
ORF1ab/nsp10134R134RcgCcgT11AY.790.001211
ORF1ab/nsp10134R134RcgCcgT11AY.840.000437
ORF1ab/nsp10134R134RcgCcgT11AY.9.20.000037
ORF1ab/nsp10134R134RcgCcgT11AY.920.000287
ORF1ab/nsp10134R134RcgCcgT11AY.950.000761
ORF1ab/nsp10134R134RcgCcgT11AY.980.000079
ORF1ab/nsp10134R134RcgCcgT11B.1.1.1700.001247
ORF1ab/nsp10134R134RcgCcgT11B.1.1.1890.001513
ORF1ab/nsp10134R134RcgCcgT11B.1.1.2140.000055
ORF1ab/nsp10134R134RcgCcgT11B.1.1.2200.001859
ORF1ab/nsp10134R134RcgCcgT11B.1.1.2220.000204
ORF1ab/nsp10134R134RcgCcgT11B.1.1.2400.004695
ORF1ab/nsp10134R134RcgCcgT11B.1.1.2580.003257
ORF1ab/nsp10134R134RcgCcgT11B.1.1.2630.001558
ORF1ab/nsp10134R134RcgCcgT11B.1.1.2860.002899
ORF1ab/nsp10134R134RcgCcgT11B.1.1.2940.001266
ORF1ab/nsp10134R134RcgCcgT11B.1.1.2970.002237
ORF1ab/nsp10134R134RcgCcgT11B.1.1.3280.016949
ORF1ab/nsp10134R134RcgCcgT11B.1.1.4640.001473
ORF1ab/nsp10134R134RcgCcgT11B.1.1.5170.006803
ORF1ab/nsp10134R134RcgCcgT11B.1.1.5280.004808
ORF1ab/nsp10134R134RcgCcgT11B.1.1110.001175
ORF1ab/nsp10134R134RcgCcgA11B.1.160.120.00641
ORF1ab/nsp10134R134RcgCcgT11B.1.1620.005025
ORF1ab/nsp10134R134RcgCcgT11B.1.177.210.000076
ORF1ab/nsp10134R134RcgCcgT11B.1.177.400.005155
ORF1ab/nsp10134R134RcgCcgT11B.1.177.720.00339
ORF1ab/nsp10134R134RcgCcgT11B.1.177.770.000726
ORF1ab/nsp10134R134RcgCcgT11B.1.177.810.000189
ORF1ab/nsp10134R134RcgCcgT11B.1.2370.004975
ORF1ab/nsp10134R134RcgCcgT11B.1.2390.001221
ORF1ab/nsp10134R134RcgCcgT11B.1.2790.000514
ORF1ab/nsp10134R134RcgCcgT11B.1.3060.005714
ORF1ab/nsp10134R134RcgCcgT11B.1.36.100.004785
ORF1ab/nsp10134R134RcgCcgT11B.1.36.180.00042
ORF1ab/nsp10134R134RcgCcgT11B.1.36.290.000517
ORF1ab/nsp10134R134RcgCcgT11B.1.36.350.002604
ORF1ab/nsp10134R134RcgCcgT11B.1.36.90.003215
ORF1ab/nsp10134R134RcgCcgT11B.1.3750.00082
ORF1ab/nsp10134R134RcgCcgT11B.1.3990.001934
ORF1ab/nsp10134R134RcgCcgT11B.1.416.10.001563
ORF1ab/nsp10134R134RcgCcgT11B.1.4220.000812
ORF1ab/nsp10134R134RcgCcgT11B.1.4330.003195
ORF1ab/nsp10134R134RcgCcgT11B.1.5640.000426
ORF1ab/nsp10134R134RcgCcgT11B.1.5680.001111
ORF1ab/nsp10134R134RcgCcgT11B.1.5750.000303
ORF1ab/nsp10134R134RcgCcgT11B.1.621.10.000506
ORF1ab/nsp10134R134RcgCcgT11B.1.780.008547
ORF1ab/nsp10134R134RcgCcgT11B.1.940.027027
ORF1ab/nsp10134R134RcgCcgT11C.360.000911
ORF1ab/nsp10134R134RcgCcgT11P.1.160.000374
ORF1ab/nsp10134R134RcgCcgT11P.20.000187
ORF1ab/nsp10134R134RcgCcgT11Q.10.000126