CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp10 : Mut = P84S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1084P84SP4337SnonsynCcaTca25932593113274-13276

Details of the mutation P84S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1084P84SCcaTca25932593All0.000496
ORF1ab/nsp1084P84SCcaTca449449AY.40.000699
ORF1ab/nsp1084P84SCcaTca264264B.1.1.70.000236
ORF1ab/nsp1084P84SCcaTca168168AY.250.00101
ORF1ab/nsp1084P84SCcaTca163163AY.370.051517
ORF1ab/nsp1084P84SCcaTca126126AY.440.000767
ORF1ab/nsp1084P84SCcaTca100100B.1.5900.454545
ORF1ab/nsp1084P84SCcaTca9494B.1.5911
ORF1ab/nsp1084P84SCcaTca8585B.1.617.20.00032
ORF1ab/nsp1084P84SCcaTca7676AY.30.000756
ORF1ab/nsp1084P84SCcaTca7676AY.430.000337
ORF1ab/nsp1084P84SCcaTca6666B.1.6090.03164
ORF1ab/nsp1084P84SCcaTca5252AY.1030.000323
ORF1ab/nsp1084P84SCcaTca4848B.1.20.000423
ORF1ab/nsp1084P84SCcaTca4545AY.99.20.004147
ORF1ab/nsp1084P84SCcaTca3939B.1.1600.001216
ORF1ab/nsp1084P84SCcaTca3838B.1.10.000689
ORF1ab/nsp1084P84SCcaTca3636AY.260.001019
ORF1ab/nsp1084P84SCcaTca3636B.10.00033
ORF1ab/nsp1084P84SCcaTca3535B.1.2580.002329
ORF1ab/nsp1084P84SCcaTca3434B.1.1770.000448
ORF1ab/nsp1084P84SCcaTca3333P.10.00052
ORF1ab/nsp1084P84SCcaTca3131AY.750.001737
ORF1ab/nsp1084P84SCcaTca3131AY.980.002449
ORF1ab/nsp1084P84SCcaTca2525B.1.5510.032258
ORF1ab/nsp1084P84SCcaTca1717AE.80.008313
ORF1ab/nsp1084P84SCcaTca1616B.1.360.002334
ORF1ab/nsp1084P84SCcaTca1414AY.390.000346
ORF1ab/nsp1084P84SCcaTca1313AY.1110.002381
ORF1ab/nsp1084P84SCcaTca1313AY.4.10.009587
ORF1ab/nsp1084P84SCcaTca1313B.1.1.1530.014239
ORF1ab/nsp1084P84SCcaTca1212AY.50.000248
ORF1ab/nsp1084P84SCcaTca1010B.1.1.1760.004394
ORF1ab/nsp1084P84SCcaTca1010B.1.1.5190.000397
ORF1ab/nsp1084P84SCcaTca1010B.1.5950.00261
ORF1ab/nsp1084P84SCcaTca99AY.1000.000414
ORF1ab/nsp1084P84SCcaTca99B.1.5090.007792
ORF1ab/nsp1084P84SCcaTca99D.20.000675
ORF1ab/nsp1084P84SCcaTca88AY.98.10.000387
ORF1ab/nsp1084P84SCcaTca77AY.1020.000186
ORF1ab/nsp1084P84SCcaTca77AY.39.10.000277
ORF1ab/nsp1084P84SCcaTca77B.1.1.2140.000388
ORF1ab/nsp1084P84SCcaTca77B.1.4270.000353
ORF1ab/nsp1084P84SCcaTca77B.1.4290.000165
ORF1ab/nsp1084P84SCcaTca66AY.230.000418
ORF1ab/nsp1084P84SCcaTca66AY.3.10.000512
ORF1ab/nsp1084P84SCcaTca66AY.4.20.00013
ORF1ab/nsp1084P84SCcaTca66AY.90.000406
ORF1ab/nsp1084P84SCcaTca55AY.1190.000177
ORF1ab/nsp1084P84SCcaTca55AY.200.000194
ORF1ab/nsp1084P84SCcaTca55AY.290.000079
ORF1ab/nsp1084P84SCcaTca55AY.840.002187
ORF1ab/nsp1084P84SCcaTca55B.1.2400.001078
ORF1ab/nsp1084P84SCcaTca55B.1.5960.000436
ORF1ab/nsp1084P84SCcaTca55N.50.008834
ORF1ab/nsp1084P84SCcaTca55Z.10.014451
ORF1ab/nsp1084P84SCcaTca44AY.1070.001864
ORF1ab/nsp1084P84SCcaTca44AY.1200.000149
ORF1ab/nsp1084P84SCcaTca44AY.450.000487
ORF1ab/nsp1084P84SCcaTca44B.1.1.2650.012618
ORF1ab/nsp1084P84SCcaTca44B.1.3510.000119
ORF1ab/nsp1084P84SCcaTca44B.1.617.10.000516
ORF1ab/nsp1084P84SCcaTca33A0.001161
ORF1ab/nsp1084P84SCcaTca33AY.120.000948
ORF1ab/nsp1084P84SCcaTca33AY.1210.000406
ORF1ab/nsp1084P84SCcaTca33AY.340.000291
ORF1ab/nsp1084P84SCcaTca33AY.9.20.00011
ORF1ab/nsp1084P84SCcaTca33AY.91.10.012195
ORF1ab/nsp1084P84SCcaTca33B.1.1.3170.001235
ORF1ab/nsp1084P84SCcaTca33B.1.177.810.000568
ORF1ab/nsp1084P84SCcaTca33B.1.2140.010989
ORF1ab/nsp1084P84SCcaTca33B.1.36.290.001552
ORF1ab/nsp1084P84SCcaTca33B.1.5260.000071
ORF1ab/nsp1084P84SCcaTca33B.1.6210.000266
ORF1ab/nsp1084P84SCcaTca33C.370.000348
ORF1ab/nsp1084P84SCcaTca33P.1.140.000143
ORF1ab/nsp1084P84SCcaTca33Q.30.000435
ORF1ab/nsp1084P84SCcaTca22AY.1170.000169
ORF1ab/nsp1084P84SCcaTca22AY.330.000134
ORF1ab/nsp1084P84SCcaTca22AY.350.000466
ORF1ab/nsp1084P84SCcaTca22AY.420.00008
ORF1ab/nsp1084P84SCcaTca22AY.460.000208
ORF1ab/nsp1084P84SCcaTca22AY.46.50.000397
ORF1ab/nsp1084P84SCcaTca22AY.46.60.000144
ORF1ab/nsp1084P84SCcaTca22AY.680.000547
ORF1ab/nsp1084P84SCcaTca22AY.740.000231
ORF1ab/nsp1084P84SCcaTca22AY.810.003984
ORF1ab/nsp1084P84SCcaTca22AY.9.10.000167
ORF1ab/nsp1084P84SCcaTca22B.1.1.2540.022472
ORF1ab/nsp1084P84SCcaTca22B.1.1.280.000622
ORF1ab/nsp1084P84SCcaTca22B.1.1.4110.029412
ORF1ab/nsp1084P84SCcaTca22B.1.177.210.000153
ORF1ab/nsp1084P84SCcaTca22B.1.177.40.000422
ORF1ab/nsp1084P84SCcaTca22B.1.2210.000142
ORF1ab/nsp1084P84SCcaTca22B.1.2430.000139
ORF1ab/nsp1084P84SCcaTca22B.1.4800.004975
ORF1ab/nsp1084P84SCcaTca22B.1.5240.002813
ORF1ab/nsp1084P84SCcaTca22B.1.5750.000607
ORF1ab/nsp1084P84SCcaTca22B.1.5770.001375
ORF1ab/nsp1084P84SCcaTca22B.1.6370.000146
ORF1ab/nsp1084P84SCcaTca22C.1.20.008511
ORF1ab/nsp1084P84SCcaTca22N.60.014184
ORF1ab/nsp1084P84SCcaTca22P.1.150.000465
ORF1ab/nsp1084P84SCcaTca22P.1.17.10.00175
ORF1ab/nsp1084P84SCcaTca11AD.20.000219
ORF1ab/nsp1084P84SCcaTca11AU.10.001266
ORF1ab/nsp1084P84SCcaTca11AY.100.00053
ORF1ab/nsp1084P84SCcaTca11AY.1050.000643
ORF1ab/nsp1084P84SCcaTca11AY.1130.000142
ORF1ab/nsp1084P84SCcaTca11AY.1140.000231
ORF1ab/nsp1084P84SCcaTca11AY.1160.000287
ORF1ab/nsp1084P84SCcaTca11AY.130.000161
ORF1ab/nsp1084P84SCcaTca11AY.140.000088
ORF1ab/nsp1084P84SCcaTca11AY.190.00114
ORF1ab/nsp1084P84SCcaTca11AY.220.002092
ORF1ab/nsp1084P84SCcaTca11AY.39.1.10.000725
ORF1ab/nsp1084P84SCcaTca11AY.410.000294
ORF1ab/nsp1084P84SCcaTca11AY.470.000031
ORF1ab/nsp1084P84SCcaTca11AY.5.40.000277
ORF1ab/nsp1084P84SCcaTca11AY.530.000288
ORF1ab/nsp1084P84SCcaTca11AY.540.000095
ORF1ab/nsp1084P84SCcaTca11AY.620.000436
ORF1ab/nsp1084P84SCcaTca11AY.640.000595
ORF1ab/nsp1084P84SCcaTca11AY.650.000533
ORF1ab/nsp1084P84SCcaTca11AY.710.000475
ORF1ab/nsp1084P84SCcaTca11AY.950.000761
ORF1ab/nsp1084P84SCcaTca11AZ.10.000867
ORF1ab/nsp1084P84SCcaTca11B0.000128
ORF1ab/nsp1084P84SCcaTca11B.1.1.1410.002012
ORF1ab/nsp1084P84SCcaTca11B.1.1.2070.001182
ORF1ab/nsp1084P84SCcaTca11B.1.1.2220.000204
ORF1ab/nsp1084P84SCcaTca11B.1.1.2280.003049
ORF1ab/nsp1084P84SCcaTca11B.1.1.2310.003096
ORF1ab/nsp1084P84SCcaTca11B.1.1.2980.000862
ORF1ab/nsp1084P84SCcaTca11B.1.1.3110.000358
ORF1ab/nsp1084P84SCcaTca11B.1.1.3180.000302
ORF1ab/nsp1084P84SCcaTca11B.1.1.3250.025641
ORF1ab/nsp1084P84SCcaTca11B.1.1.3880.045455
ORF1ab/nsp1084P84SCcaTca11B.1.1.4280.009434
ORF1ab/nsp1084P84SCcaTca11B.1.160.230.004831
ORF1ab/nsp1084P84SCcaTca11B.1.160.290.004219
ORF1ab/nsp1084P84SCcaTca11B.1.1640.014925
ORF1ab/nsp1084P84SCcaTca11B.1.177.560.000668
ORF1ab/nsp1084P84SCcaTca11B.1.177.570.000281
ORF1ab/nsp1084P84SCcaTca11B.1.177.70.000165
ORF1ab/nsp1084P84SCcaTca11B.1.177.750.001041
ORF1ab/nsp1084P84SCcaTca11B.1.2410.000812
ORF1ab/nsp1084P84SCcaTca11B.1.258.170.000104
ORF1ab/nsp1084P84SCcaTca11B.1.3200.001245
ORF1ab/nsp1084P84SCcaTca11B.1.3290.000608
ORF1ab/nsp1084P84SCcaTca11B.1.3960.000706
ORF1ab/nsp1084P84SCcaTca11B.1.4080.00369
ORF1ab/nsp1084P84SCcaTca11B.1.438.10.000107
ORF1ab/nsp1084P84SCcaTca11B.1.5030.002488
ORF1ab/nsp1084P84SCcaTca11B.1.5170.000427
ORF1ab/nsp1084P84SCcaTca11B.1.5250.000113
ORF1ab/nsp1084P84SCcaTca11B.1.5410.004425
ORF1ab/nsp1084P84SCcaTca11B.1.5760.000907
ORF1ab/nsp1084P84SCcaTca11B.1.5880.00091
ORF1ab/nsp1084P84SCcaTca11B.6.60.000889
ORF1ab/nsp1084P84SCcaTca11P.20.000187
ORF1ab/nsp1084P84SCcaTca11Q.80.000165