CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp10 : Mut = H48H

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1048H48HH4301HsyncaCcaT1535315353113166-13168

Details of the mutation H48H within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1048H48HcaCcaT1535315353All0.002936
ORF1ab/nsp1048H48HcaCcaT70087008AY.1210.948309
ORF1ab/nsp1048H48HcaCcaT51905190B.1.617.20.019543
ORF1ab/nsp1048H48HcaCcaT426426AY.430.001887
ORF1ab/nsp1048H48HcaCcaT185185AY.390.004572
ORF1ab/nsp1048H48HcaCcaT162162B.1.1.70.000145
ORF1ab/nsp1048H48HcaCcaT144144AY.1200.005354
ORF1ab/nsp1048H48HcaCcaT134134AY.1050.086174
ORF1ab/nsp1048H48HcaCcaT128128AY.440.000779
ORF1ab/nsp1048H48HcaCcaT128128AY.750.007171
ORF1ab/nsp1048H48HcaCcaT125125AY.1020.003314
ORF1ab/nsp1048H48HcaCcaT108108AY.1030.000671
ORF1ab/nsp1048H48HcaCcaT103103B.1.36.120.990385
ORF1ab/nsp1048H48HcaCcaT8383AY.420.003339
ORF1ab/nsp1048H48HcaCcaT8181AY.330.005409
ORF1ab/nsp1048H48HcaCcaT6666AY.40.000103
ORF1ab/nsp1048H48HcaCcaT6666AY.98.10.003196
ORF1ab/nsp1048H48HcaCcaT6565AY.46.20.041296
ORF1ab/nsp1048H48HcaCcaT5252B.1.1.1771
ORF1ab/nsp1048H48HcaCcaT5151AY.980.004029
ORF1ab/nsp1048H48HcaCcaT5050AY.1170.004226
ORF1ab/nsp1048H48HcaCcaT4848AY.470.001493
ORF1ab/nsp1048H48HcaCcaT4545AY.340.004363
ORF1ab/nsp1048H48HcaCcaT4545B.1.5250.005092
ORF1ab/nsp1048H48HcaCcaT4444AY.690.008214
ORF1ab/nsp1048H48HcaCcaT3636AY.250.000217
ORF1ab/nsp1048H48HcaCcaT3535AY.1060.011721
ORF1ab/nsp1048H48HcaCcaT3333AY.450.004016
ORF1ab/nsp1048H48HcaCcaT3232AY.34.10.016318
ORF1ab/nsp1048H48HcaCcaT2626AY.230.001813
ORF1ab/nsp1048H48HcaCcaT2525B.10.000229
ORF1ab/nsp1048H48HcaCcaT2424AY.50.000496
ORF1ab/nsp1048H48HcaCcaT2121AY.1180.001316
ORF1ab/nsp1048H48HcaCcaT1919AY.210.036053
ORF1ab/nsp1048H48HcaCcaT1919AY.840.008311
ORF1ab/nsp1048H48HcaCcaT1818AY.1100.002028
ORF1ab/nsp1048H48HcaCcaT1717AY.5.30.005735
ORF1ab/nsp1048H48HcaCcaT1616AY.120.10.005136
ORF1ab/nsp1048H48HcaCcaT1414AY.460.001457
ORF1ab/nsp1048H48HcaCcaT1414AY.920.004022
ORF1ab/nsp1048H48HcaCcaT1313AY.1190.000459
ORF1ab/nsp1048H48HcaCcaT1313B.1.1.5190.000516
ORF1ab/nsp1048H48HcaCcaT1313B.1.20.000114
ORF1ab/nsp1048H48HcaCcaT1212AY.120.003793
ORF1ab/nsp1048H48HcaCcaT1212AY.320.00639
ORF1ab/nsp1048H48HcaCcaT1212AY.770.013529
ORF1ab/nsp1048H48HcaCcaT1212P.10.000189
ORF1ab/nsp1048H48HcaCcaT1010AY.290.000158
ORF1ab/nsp1048H48HcaCcaT1010AY.46.40.001645
ORF1ab/nsp1048H48HcaCcaT1010AY.70.00196
ORF1ab/nsp1048H48HcaCcaT1010AY.780.015408
ORF1ab/nsp1048H48HcaCcaT1010AY.930.002731
ORF1ab/nsp1048H48HcaCcaT99AY.1000.000414
ORF1ab/nsp1048H48HcaCcaT99AY.4.50.000967
ORF1ab/nsp1048H48HcaCcaT88AY.740.000925
ORF1ab/nsp1048H48HcaCcaT88AY.9.20.000294
ORF1ab/nsp1048H48HcaCcaT88AY.900.005476
ORF1ab/nsp1048H48HcaCcaT77AY.1110.001282
ORF1ab/nsp1048H48HcaCcaT77AY.1160.002007
ORF1ab/nsp1048H48HcaCcaT77AY.410.002058
ORF1ab/nsp1048H48HcaCcaT77AY.820.009498
ORF1ab/nsp1048H48HcaCcaT77AY.950.005327
ORF1ab/nsp1048H48HcaCcaT66AY.130.000966
ORF1ab/nsp1048H48HcaCcaT66AY.140.000528
ORF1ab/nsp1048H48HcaCcaT66AY.3.10.000512
ORF1ab/nsp1048H48HcaCcaT66AY.46.10.00616
ORF1ab/nsp1048H48HcaCcaT66AY.99.20.000553
ORF1ab/nsp1048H48HcaCcaT66B.1.4290.000141
ORF1ab/nsp1048H48HcaCcaT66C.370.000696
ORF1ab/nsp1048H48HcaCcaT55AY.1080.005513
ORF1ab/nsp1048H48HcaCcaT55AY.710.002375
ORF1ab/nsp1048H48HcaCcaT55AY.880.004421
ORF1ab/nsp1048H48HcaCcaT55AY.910.003652
ORF1ab/nsp1048H48HcaCcaT55AY.990.005247
ORF1ab/nsp1048H48HcaCcaT55B.1.10.000091
ORF1ab/nsp1048H48HcaCcaT55B.1.1600.000156
ORF1ab/nsp1048H48HcaCcaT55B.1.177.560.003338
ORF1ab/nsp1048H48HcaCcaT44AY.1040.007937
ORF1ab/nsp1048H48HcaCcaT44AY.110.005355
ORF1ab/nsp1048H48HcaCcaT44AY.270.000259
ORF1ab/nsp1048H48HcaCcaT44AY.400.003857
ORF1ab/nsp1048H48HcaCcaT44AY.510.003636
ORF1ab/nsp1048H48HcaCcaT44AY.800.004515
ORF1ab/nsp1048H48HcaCcaT44AY.860.00332
ORF1ab/nsp1048H48HcaCcaT44B.1.1770.000053
ORF1ab/nsp1048H48HcaCcaT44B.1.5260.000094
ORF1ab/nsp1048H48HcaCcaT33A.2.50.001497
ORF1ab/nsp1048H48HcaCcaT33AY.1140.000693
ORF1ab/nsp1048H48HcaCcaT33AY.170.02459
ORF1ab/nsp1048H48HcaCcaT33AY.30.00003
ORF1ab/nsp1048H48HcaCcaT33AY.5.40.00083
ORF1ab/nsp1048H48HcaCcaT33AY.620.001307
ORF1ab/nsp1048H48HcaCcaT33AY.870.002498
ORF1ab/nsp1048H48HcaCcaT33B.1.5950.000783
ORF1ab/nsp1048H48HcaCcaT33B.1.5960.000261
ORF1ab/nsp1048H48HcaCcaT33B.1.617.10.000387
ORF1ab/nsp1048H48HcaCcaT33P.1.140.000143
ORF1ab/nsp1048H48HcaCcaT22AY.190.002281
ORF1ab/nsp1048H48HcaCcaT22AY.200.000078
ORF1ab/nsp1048H48HcaCcaT22AY.260.000057
ORF1ab/nsp1048H48HcaCcaT22AY.350.000466
ORF1ab/nsp1048H48HcaCcaT22AY.360.000296
ORF1ab/nsp1048H48HcaCcaT22AY.46.60.000144
ORF1ab/nsp1048H48HcaCcaT22AY.500.001599
ORF1ab/nsp1048H48HcaCcaT22AY.520.001629
ORF1ab/nsp1048H48HcaCcaT22AY.60.000082
ORF1ab/nsp1048H48HcaCcaT22AY.640.00119
ORF1ab/nsp1048H48HcaCcaT22AY.670.000929
ORF1ab/nsp1048H48HcaCcaT22AY.75.10.000361
ORF1ab/nsp1048H48HcaCcaT22AY.830.003448
ORF1ab/nsp1048H48HcaCcaT22AY.9.10.000167
ORF1ab/nsp1048H48HcaCcaT22B0.000256
ORF1ab/nsp1048H48HcaCcaT22B.1.2580.000133
ORF1ab/nsp1048H48HcaCcaT22B.1.3510.000059
ORF1ab/nsp1048H48HcaCcaT22B.1.3690.00057
ORF1ab/nsp1048H48HcaCcaT22B.1.4270.000101
ORF1ab/nsp1048H48HcaCcaT22B.1.4780.023529
ORF1ab/nsp1048H48HcaCcaT22B.1.6230.001073
ORF1ab/nsp1048H48HcaCcaT22P.70.008734
ORF1ab/nsp1048H48HcaCcaT11AE.80.000489
ORF1ab/nsp1048H48HcaCcaT11AY.1010.00049
ORF1ab/nsp1048H48HcaCcaT11AY.1090.00074
ORF1ab/nsp1048H48HcaCcaT11AY.1130.000142
ORF1ab/nsp1048H48HcaCcaT11AY.116.10.000311
ORF1ab/nsp1048H48HcaCcaT11AY.29.10.000221
ORF1ab/nsp1048H48HcaCcaT11AY.370.000316
ORF1ab/nsp1048H48HcaCcaT11AY.39.10.00004
ORF1ab/nsp1048H48HcaCcaT11AY.4.2.10.000149
ORF1ab/nsp1048H48HcaCcaT11AY.4.30.000842
ORF1ab/nsp1048H48HcaCcaT11AY.540.000095
ORF1ab/nsp1048H48HcaCcaT11AY.550.000917
ORF1ab/nsp1048H48HcaCcaT11AY.570.000656
ORF1ab/nsp1048H48HcaCcaT11AY.580.000907
ORF1ab/nsp1048H48HcaCcaT11AY.590.00053
ORF1ab/nsp1048H48HcaCcaT11AY.660.00107
ORF1ab/nsp1048H48HcaCcaT11AY.7.10.000113
ORF1ab/nsp1048H48HcaCcaT11AY.700.000209
ORF1ab/nsp1048H48HcaCcaT11AY.730.000665
ORF1ab/nsp1048H48HcaCcaT11AY.80.000606
ORF1ab/nsp1048H48HcaCcaT11AY.960.002075
ORF1ab/nsp1048H48HcaCcaT11AY.99.10.001553
ORF1ab/nsp1048H48HcaCcaT11B.1.1.2220.000204
ORF1ab/nsp1048H48HcaCcaT11B.1.1.2310.003096
ORF1ab/nsp1048H48HcaCcaT11B.1.1.2430.004082
ORF1ab/nsp1048H48HcaCcaT11B.1.1.2690.001353
ORF1ab/nsp1048H48HcaCcaT11B.1.1.280.000311
ORF1ab/nsp1048H48HcaCcaT11B.1.1.2840.000107
ORF1ab/nsp1048H48HcaCcaT11B.1.1.390.00051
ORF1ab/nsp1048H48HcaCcaT11B.1.1.700.000341
ORF1ab/nsp1048H48HcaCcaT11B.1.1110.001175
ORF1ab/nsp1048H48HcaCcaT11B.1.1570.002985
ORF1ab/nsp1048H48HcaCcaT11B.1.160.320.004292
ORF1ab/nsp1048H48HcaCcaT11B.1.177.40.000211
ORF1ab/nsp1048H48HcaCcaT11B.1.177.810.000189
ORF1ab/nsp1048H48HcaCcaT11B.1.2060.000816
ORF1ab/nsp1048H48HcaCcaT11B.1.2100.002132
ORF1ab/nsp1048H48HcaCcaT11B.1.214.20.0006
ORF1ab/nsp1048H48HcaCcaT11B.1.2340.000132
ORF1ab/nsp1048H48HcaCcaT11B.1.2390.001221
ORF1ab/nsp1048H48HcaCcaT11B.1.2400.000216
ORF1ab/nsp1048H48HcaCcaT11B.1.2410.000812
ORF1ab/nsp1048H48HcaCcaT11B.1.2840.013158
ORF1ab/nsp1048H48HcaCcaT11B.1.3010.005917
ORF1ab/nsp1048H48HcaCcaT11B.1.351.30.000876
ORF1ab/nsp1048H48HcaCcaT11B.1.36.160.001425
ORF1ab/nsp1048H48HcaCcaT11B.1.4560.003268
ORF1ab/nsp1048H48HcaCcaT11B.1.5760.000907
ORF1ab/nsp1048H48HcaCcaT11B.1.6120.002653
ORF1ab/nsp1048H48HcaCcaT11B.1.6210.000089
ORF1ab/nsp1048H48HcaCcaT11B.290.003509
ORF1ab/nsp1048H48HcaCcaT11B.3.10.001658
ORF1ab/nsp1048H48HcaCcaT11C.180.002591
ORF1ab/nsp1048H48HcaCcaT11N.50.001767
ORF1ab/nsp1048H48HcaCcaT11P.1.10.000318
ORF1ab/nsp1048H48HcaCcaT11P.1.20.001156
ORF1ab/nsp1048H48HcaCcaT11P.1.70.000319
ORF1ab/nsp1048H48HcaCcaT11Q.80.000165