CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp10 : Mut = G125S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp10125G125SG4378SnonsynGgtAgt103990.96116513397-13399
ORF1ab/nsp10125G125SG4378SnonsynGGTTCA10320.019417513397-13399
ORF1ab/nsp10125G125SG4378SnonsynGGtTCt10310.0097087413397-13399
ORF1ab/nsp10125G125SG4378SnonsynGGTTCC10310.0097087413397-13399

Details of the mutation G125S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp10125G125SGgtAgt99103All0.000019
ORF1ab/nsp10125G125SGGTTCA2103All0
ORF1ab/nsp10125G125SGGtTCt1103All0
ORF1ab/nsp10125G125SGGTTCC1103All0
ORF1ab/nsp10125G125SGgtAgt1515B.1.617.20.000056
ORF1ab/nsp10125G125SGgtAgt99AY.30.00009
ORF1ab/nsp10125G125SGgtAgt77AY.1030.000043
ORF1ab/nsp10125G125SGgtAgt47AY.40.000006
ORF1ab/nsp10125G125SGGTTCA27AY.40.000003
ORF1ab/nsp10125G125SGGTTCC17AY.40.000002
ORF1ab/nsp10125G125SGgtAgt77B.1.4270.000353
ORF1ab/nsp10125G125SGgtAgt66AY.430.000027
ORF1ab/nsp10125G125SGgtAgt55B.10.000046
ORF1ab/nsp10125G125SGgtAgt44AY.250.000024
ORF1ab/nsp10125G125SGgtAgt44AY.9.10.000335
ORF1ab/nsp10125G125SGgtAgt44B.1.1.70.000004
ORF1ab/nsp10125G125SGgtAgt33B.1.1600.000094
ORF1ab/nsp10125G125SGgtAgt33B.1.177.580.003995
ORF1ab/nsp10125G125SGgtAgt33B.1.3290.001823
ORF1ab/nsp10125G125SGgtAgt33B.1.4180.047619
ORF1ab/nsp10125G125SGgtAgt22AY.440.000012
ORF1ab/nsp10125G125SGgtAgt12AY.840.000437
ORF1ab/nsp10125G125SGGtTCt12AY.840.000437
ORF1ab/nsp10125G125SGgtAgt22B.1.177.860.000367
ORF1ab/nsp10125G125SGgtAgt22B.1.6040.034483
ORF1ab/nsp10125G125SGgtAgt11AY.1020.000027
ORF1ab/nsp10125G125SGgtAgt11AY.1060.000335
ORF1ab/nsp10125G125SGgtAgt11AY.120.000316
ORF1ab/nsp10125G125SGgtAgt11AY.120.10.000321
ORF1ab/nsp10125G125SGgtAgt11AY.4.20.000022
ORF1ab/nsp10125G125SGgtAgt11AY.670.000464
ORF1ab/nsp10125G125SGgtAgt11AY.990.001049
ORF1ab/nsp10125G125SGgtAgt11B.1.1.2140.000055
ORF1ab/nsp10125G125SGgtAgt11B.1.1.2200.001859
ORF1ab/nsp10125G125SGgtAgt11B.1.110.30.000718
ORF1ab/nsp10125G125SGgtAgt11B.1.214.30.007143
ORF1ab/nsp10125G125SGgtAgt11B.1.2400.000216
ORF1ab/nsp10125G125SGgtAgt11B.1.2580.000067
ORF1ab/nsp10125G125SGgtAgt11B.1.5960.000087
ORF1ab/nsp10125G125SGgtAgt11P.10.000016