CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp10 | 134 | R134C | R4387C | nonsyn | Cgc | Tgc | 5646 | 5645 | 0.999823 | 13424-13426 |
ORF1ab/nsp10 | 134 | R134C | R4387C | nonsyn | CgC | TgT | 5646 | 1 | 0.000177117 | 13424-13426 |
ORF1ab/nsp10 | 134 | R134R | R4387R | syn | cgC | cgT | 4722 | 4609 | 0.976069 | 13424-13426 |
ORF1ab/nsp10 | 134 | R134R | R4387R | syn | cgC | cgA | 4722 | 105 | 0.0222363 | 13424-13426 |
ORF1ab/nsp10 | 134 | R134R | R4387R | syn | cgC | cgG | 4722 | 7 | 0.00148242 | 13424-13426 |
ORF1ab/nsp10 | 134 | R134R | R4387R | syn | CgC | AgA | 4722 | 1 | 0.000211775 | 13424-13426 |
ORF1ab/nsp10 | 134 | R134S | R4387S | nonsyn | Cgc | Agc | 1761 | 1760 | 0.999432 | 13424-13426 |
ORF1ab/nsp10 | 134 | R134S | R4387S | nonsyn | CgC | AgT | 1761 | 1 | 0.000567859 | 13424-13426 |
ORF1ab/nsp10 | 134 | R134H | R4387H | nonsyn | cGc | cAc | 861 | 859 | 0.997677 | 13424-13426 |
ORF1ab/nsp10 | 134 | R134H | R4387H | nonsyn | cGC | cAT | 861 | 2 | 0.00232288 | 13424-13426 |
ORF1ab/nsp10 | 134 | R134N | R4387N | nonsyn | CGc | AAc | 214 | 214 | 1 | 13424-13426 |
ORF1ab/nsp10 | 134 | R134del | R4387del | del | CGC | --- | 71 | 71 | 1 | 13424-13426 |
ORF1ab/nsp10 | 134 | R134L | R4387L | nonsyn | cGc | cTc | 58 | 57 | 0.982759 | 13424-13426 |
ORF1ab/nsp10 | 134 | R134L | R4387L | nonsyn | cGC | cTG | 58 | 1 | 0.0172414 | 13424-13426 |
ORF1ab/nsp10 | 134 | R134G | R4387G | nonsyn | Cgc | Ggc | 14 | 14 | 1 | 13424-13426 |
ORF1ab/nsp10 | 134 | R134del1 | R4387del1 | del | cgC | cg- | 3 | 2 | 0.666667 | 13424-13426 |
ORF1ab/nsp10 | 134 | R134del1 | R4387del1 | del | cGC | c-T | 3 | 1 | 0.333333 | 13424-13426 |
ORF1ab/nsp10 | 134 | R134P | R4387P | nonsyn | cGc | cCc | 2 | 2 | 1 | 13424-13426 |
ORF1ab/nsp10 | 134 | R134Q | R4387Q | nonsyn | cGC | cAG | 1 | 1 | 1 | 13424-13426 |
ORF1ab/nsp10 | 134 | R134T | R4387T | nonsyn | CGc | ACc | 1 | 1 | 1 | 13424-13426 |
ORF1ab/nsp10 | 134 | R134del2 | R4387del2 | del | CGc | --c | 1 | 1 | 1 | 13424-13426 |
ORF1ab/nsp10 | 134 | R134Y | R4387Y | nonsyn | CGc | TAc | 1 | 1 | 1 | 13424-13426 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 5645 | 5646 | All | 0.00108 |
ORF1ab/nsp10 | 134 | R134C | CgC | TgT | 1 | 5646 | All | 0 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 4609 | 4722 | All | 0.000882 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 105 | 4722 | All | 0.00002 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgG | 7 | 4722 | All | 0.000001 |
ORF1ab/nsp10 | 134 | R134R | CgC | AgA | 1 | 4722 | All | 0 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2713 | 2713 | AY.4 | 0.004223 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1760 | 1761 | All | 0.000337 |
ORF1ab/nsp10 | 134 | R134S | CgC | AgT | 1 | 1761 | All | 0 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1617 | 1653 | B.1.1.7 | 0.001448 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 36 | 1653 | B.1.1.7 | 0.000032 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1539 | 1539 | B.1.1.7 | 0.001378 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 859 | 861 | All | 0.000164 |
ORF1ab/nsp10 | 134 | R134H | cGC | cAT | 2 | 861 | All | 0 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 639 | 639 | B.1.1.7 | 0.000572 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 415 | 415 | P.1.14 | 0.019837 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 394 | 401 | AY.4 | 0.000613 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 7 | 401 | AY.4 | 0.000011 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 285 | 285 | B.1.36.22 | 0.344203 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 243 | 245 | B.1.1 | 0.004408 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 1 | 245 | B.1.1 | 0.000018 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgG | 1 | 245 | B.1.1 | 0.000018 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 214 | 214 | All | 0.000041 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 210 | 210 | AY.118 | 0.013156 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 178 | 178 | AY.4 | 0.000277 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 150 | 150 | B.1.617.2 | 0.000565 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 146 | 147 | B.1.1.7 | 0.000131 |
ORF1ab/nsp10 | 134 | R134H | cGC | cAT | 1 | 147 | B.1.1.7 | 0.000001 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 128 | 128 | AY.6 | 0.005264 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 113 | 113 | B.1.2 | 0.000995 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 111 | 111 | AY.4 | 0.000173 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 105 | 110 | B.1.617.2 | 0.000395 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgG | 3 | 110 | B.1.617.2 | 0.000011 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 2 | 110 | B.1.617.2 | 0.000008 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 109 | 109 | AY.43 | 0.000483 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 104 | 104 | AY.3 | 0.001034 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 101 | 101 | AY.29 | 0.001593 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 101 | 101 | B.1.1.251 | 0.801587 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 77 | 77 | AY.103 | 0.000478 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 71 | 71 | All | 0.000014 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 70 | 70 | P.1 | 0.001103 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 61 | 61 | AY.61 | 0.006391 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 57 | 60 | B.1.427 | 0.002878 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 3 | 60 | B.1.427 | 0.000151 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 57 | 58 | All | 0.000011 |
ORF1ab/nsp10 | 134 | R134L | cGC | cTG | 1 | 58 | All | 0 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 54 | 54 | P.3 | 0.086124 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 52 | 53 | AY.3 | 0.000517 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 1 | 53 | AY.3 | 0.00001 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 53 | 53 | B.1.1.7 | 0.000047 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 52 | 52 | AY.103 | 0.000323 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 52 | 52 | AY.25 | 0.000313 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 52 | 52 | AY.25 | 0.000313 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 52 | 52 | B.1.617.2 | 0.000196 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 51 | 51 | AY.44 | 0.00031 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 51 | 51 | B.1.466.2 | 0.019953 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 50 | 50 | AY.25 | 0.000301 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 48 | 48 | AY.44 | 0.000292 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 44 | 47 | P.1 | 0.000693 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 3 | 47 | P.1 | 0.000047 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 44 | 46 | B.1 | 0.000403 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 2 | 46 | B.1 | 0.000018 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 43 | 44 | AY.103 | 0.000267 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 1 | 44 | AY.103 | 0.000006 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 44 | 44 | AY.4 | 0.000068 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 43 | 43 | B.1.526 | 0.001011 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 41 | 41 | AY.44 | 0.00025 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 41 | 41 | B.1.2 | 0.000361 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 40 | 41 | B.1.221 | 0.002841 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 1 | 41 | B.1.221 | 0.000071 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 32 | 37 | AY.44 | 0.000195 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgG | 3 | 37 | AY.44 | 0.000018 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 2 | 37 | AY.44 | 0.000012 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 36 | 36 | AY.47 | 0.00112 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 35 | 35 | AY.105 | 0.022508 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 35 | 35 | AY.5 | 0.000723 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 34 | 34 | AY.117 | 0.002874 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 32 | 33 | R.1 | 0.00288 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 33 | R.1 | 0.00009 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 32 | 32 | AY.34 | 0.003103 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 32 | 32 | AY.39 | 0.000791 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 32 | 32 | B.1.526 | 0.000752 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 32 | 32 | P.1.14 | 0.00153 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 32 | 32 | Q.8 | 0.005277 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 30 | 30 | AY.3 | 0.000298 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 30 | 30 | B.1.517 | 0.01281 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 29 | 29 | AY.103 | 0.00018 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 29 | 29 | P.1 | 0.000457 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 28 | 28 | B.1.1.519 | 0.001112 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 27 | 28 | B.1.160 | 0.000842 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 1 | 28 | B.1.160 | 0.000031 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 26 | 27 | AY.20 | 0.00101 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 1 | 27 | AY.20 | 0.000039 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 27 | 27 | AY.42 | 0.001086 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 27 | 27 | AY.43 | 0.00012 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 26 | 26 | P.1 | 0.00041 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 25 | 25 | AY.27 | 0.001618 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 25 | 25 | B.1.1.7 | 0.000022 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 24 | 24 | B.1.617.2 | 0.00009 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 23 | 23 | AY.25 | 0.000138 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 21 | 22 | AY.102 | 0.000557 |
ORF1ab/nsp10 | 134 | R134R | CgC | AgA | 1 | 22 | AY.102 | 0.000027 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 22 | 22 | AY.43 | 0.000097 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 22 | 22 | B.1.429 | 0.000518 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 21 | 21 | B.1.2 | 0.000185 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 20 | 20 | AY.3 | 0.000199 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 20 | 20 | AY.74 | 0.002313 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 20 | 20 | AY.98.1 | 0.000969 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 20 | 20 | B.1.1.519 | 0.000794 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 20 | 20 | B.1.427 | 0.00101 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 19 | 19 | AY.20 | 0.000738 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 19 | 19 | B.1.1.7 | 0.000017 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 18 | 18 | AY.46.4 | 0.002961 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 18 | 18 | B.1.429 | 0.000424 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 18 | 18 | B.1.596 | 0.001568 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 17 | 17 | AY.26 | 0.000481 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 17 | 17 | B.1 | 0.000156 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 17 | 17 | B.1.1.369 | 0.007586 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 17 | 17 | B.1.177 | 0.000224 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 17 | 17 | B.1.177 | 0.000224 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 17 | 17 | B.1.351 | 0.000505 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 16 | 16 | AY.39 | 0.000395 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 16 | 16 | AY.64 | 0.009524 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 16 | 16 | B.1.243 | 0.001113 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 15 | 15 | AY.107 | 0.00699 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 15 | 15 | AY.46.4 | 0.002468 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 15 | 15 | AY.9 | 0.001014 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 15 | 15 | B.1.1.519 | 0.000596 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 15 | 15 | B.1.621 | 0.001328 |
ORF1ab/nsp10 | 134 | R134G | Cgc | Ggc | 14 | 14 | All | 0.000003 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 13 | 14 | AY.23 | 0.000907 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 1 | 14 | AY.23 | 0.00007 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 14 | 14 | B.1.1 | 0.000254 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 13 | 14 | P.1.14 | 0.000621 |
ORF1ab/nsp10 | 134 | R134C | CgC | TgT | 1 | 14 | P.1.14 | 0.000048 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 13 | 13 | AY.39 | 0.000321 |
ORF1ab/nsp10 | 134 | R134G | Cgc | Ggc | 13 | 13 | AY.4 | 0.00002 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 13 | 13 | AY.4.2 | 0.000282 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 13 | 13 | AY.43 | 0.000058 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 13 | 13 | B.1.258.17 | 0.001352 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 13 | 13 | B.1.258.17 | 0.001352 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 13 | 13 | B.1.351 | 0.000386 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 12 | 12 | B.1.160 | 0.000374 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 12 | 12 | B.1.177.21 | 0.000918 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 11 | 11 | AY.119 | 0.000388 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 11 | 11 | AY.29.1 | 0.002426 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 11 | 11 | AY.46.6 | 0.000794 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 11 | 11 | B.1.575 | 0.003337 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 11 | 11 | B.1.617.2 | 0.000041 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 10 | 10 | AY.116 | 0.002868 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 10 | 10 | AY.36 | 0.001482 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 10 | 10 | AY.4.2 | 0.000217 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 10 | 10 | AY.47 | 0.000311 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 10 | 10 | AY.52 | 0.008143 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 10 | 10 | B.1.177.12 | 0.001517 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 10 | 10 | B.1.311 | 0.002746 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 10 | 10 | B.1.628 | 0.003524 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 9 | 9 | AY.102 | 0.000239 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 9 | 9 | AY.20 | 0.00035 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 9 | 9 | AY.4 | 0.000014 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 9 | 9 | B.1.177.21 | 0.000688 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 9 | 9 | B.1.429 | 0.000212 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 9 | 9 | B.1.438.1 | 0.000965 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 8 | 8 | AY.120 | 0.000297 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 8 | 8 | AY.98.1 | 0.000387 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 8 | 8 | C.37 | 0.000929 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 7 | 7 | AY.100 | 0.000322 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 7 | 7 | AY.100 | 0.000322 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 7 | 7 | AY.100 | 0.000322 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 7 | 7 | AY.25 | 0.000042 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 7 | 7 | AY.29.1 | 0.001544 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 4 | 7 | AY.4.2 | 0.000087 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 3 | 7 | AY.4.2 | 0.000065 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 7 | 7 | AY.42 | 0.000282 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 7 | 7 | AY.42 | 0.000282 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 7 | 7 | B.1 | 0.000064 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 7 | 7 | B.1.177 | 0.000092 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 7 | 7 | B.1.351 | 0.000208 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 7 | 7 | B.1.36 | 0.001021 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 7 | 7 | B.1.427 | 0.000353 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 7 | 7 | B.1.525 | 0.000792 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 7 | 7 | D.2 | 0.000525 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 6 | 6 | AY.111 | 0.001099 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 6 | 6 | AY.116.1 | 0.001869 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 6 | 6 | AY.29 | 0.000095 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 6 | 6 | AY.29 | 0.000095 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 6 | 6 | AY.29 | 0.000095 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 6 | 6 | AY.45 | 0.00073 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 6 | 6 | AY.6 | 0.000247 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 6 | 6 | B.1 | 0.000055 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 6 | 6 | B.1.1 | 0.000109 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 6 | 6 | B.1.1.239 | 0.193548 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 6 | 6 | B.1.2 | 0.000053 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 6 | 6 | B.1.2 | 0.000053 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 6 | 6 | B.1.258 | 0.000399 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 6 | 6 | B.1.258 | 0.000399 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 6 | 6 | B.1.258.17 | 0.000624 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 6 | 6 | B.1.351 | 0.000178 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 6 | 6 | B.1.429 | 0.000141 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 6 | 6 | B.1.526 | 0.000141 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 6 | 6 | P.1.1 | 0.001906 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 5 | 5 | AY.103 | 0.000031 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 5 | 5 | AY.110 | 0.000563 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 5 | 5 | AY.119 | 0.000177 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 5 | 5 | AY.120 | 0.000186 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 5 | 5 | AY.30 | 0.001979 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 5 | 5 | AY.33 | 0.000334 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 5 | 5 | AY.46.6 | 0.000361 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 5 | 5 | AY.61 | 0.000524 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 5 | 5 | AY.70 | 0.001043 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 5 | 5 | AY.75 | 0.00028 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 5 | 5 | B.1 | 0.000046 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 5 | 5 | B.1.1.138 | 0.030303 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 5 | 5 | B.1.160 | 0.000156 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 5 | 5 | B.1.240 | 0.001078 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 5 | 5 | B.1.427 | 0.000252 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 5 | 5 | B.1.526 | 0.000118 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 5 | 5 | B.1.637 | 0.000365 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 5 | 5 | B.1.637 | 0.000365 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 5 | 5 | C.37 | 0.00058 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 5 | 5 | P.1.17 | 0.000809 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 4 | 4 | AY.106 | 0.00134 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 4 | 4 | AY.118 | 0.000251 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 4 | 4 | AY.19 | 0.004561 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 4 | 4 | AY.23 | 0.000279 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 4 | 4 | AY.39 | 0.000099 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 4 | 4 | AY.4 | 0.000006 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 4 | 4 | AY.4.5 | 0.00043 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 4 | 4 | AY.43 | 0.000018 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 4 | 4 | AY.43 | 0.000018 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 4 | 4 | AY.44 | 0.000024 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 4 | 4 | AY.5 | 0.000083 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 4 | 4 | AY.5 | 0.000083 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 4 | 4 | AY.5.4 | 0.001107 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 4 | 4 | AY.5.4 | 0.001107 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 4 | 4 | AY.54 | 0.000381 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 4 | 4 | AY.6 | 0.000165 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 4 | 4 | AY.88 | 0.003537 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 4 | 4 | AY.9 | 0.00027 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 4 | 4 | AY.9 | 0.00027 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 4 | 4 | AY.9.2 | 0.000147 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 4 | 4 | AY.98 | 0.000316 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 4 | 4 | AY.98.1 | 0.000194 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 4 | 4 | AY.99.2 | 0.000369 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 4 | 4 | B.1.1.133 | 0.033898 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 4 | 4 | B.1.1.153 | 0.004381 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 4 | 4 | B.1.126 | 0.005102 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 4 | 4 | B.1.177.65 | 0.002661 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 4 | 4 | B.1.258.17 | 0.000416 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 4 | 4 | B.1.596 | 0.000349 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 4 | 4 | B.1.617.1 | 0.000516 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 4 | 4 | P.1.15 | 0.000929 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 4 | 4 | P.1.17 | 0.000647 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 4 | 4 | Q.1 | 0.000505 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 3 | 3 | A.2.5 | 0.001497 |
ORF1ab/nsp10 | 134 | R134del1 | cgC | cg- | 2 | 3 | All | 0 |
ORF1ab/nsp10 | 134 | R134del1 | cGC | c-T | 1 | 3 | All | 0 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 3 | 3 | AY.100 | 0.000138 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 3 | 3 | AY.102 | 0.00008 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 3 | 3 | AY.105 | 0.001929 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 3 | 3 | AY.106 | 0.001005 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 3 | 3 | AY.13 | 0.000483 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 3 | 3 | AY.14 | 0.000264 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 3 | 3 | AY.16 | 0.001139 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 3 | 3 | AY.23 | 0.000209 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 3 | 3 | AY.23.1 | 0.001252 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 3 | 3 | AY.23.1 | 0.001252 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 3 | 3 | AY.26 | 0.000085 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 3 | 3 | AY.26 | 0.000085 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 3 | 3 | AY.27 | 0.000194 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 2 | 3 | AY.3.1 | 0.000171 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 3 | AY.3.1 | 0.000085 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 3 | 3 | AY.34 | 0.000291 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 3 | 3 | AY.4.5 | 0.000322 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 3 | 3 | AY.46.4 | 0.000494 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 3 | 3 | AY.46.6 | 0.000217 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 3 | 3 | AY.54 | 0.000286 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 3 | 3 | AY.74 | 0.000347 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 3 | 3 | AY.98.1 | 0.000145 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 3 | 3 | AZ.2 | 0.002463 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 3 | 3 | B.1.1 | 0.000054 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 3 | 3 | B.1.1 | 0.000054 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 3 | 3 | B.1.1.357 | 0.375 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 3 | 3 | B.1.1.369 | 0.001339 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 3 | 3 | B.1.1.487 | 0.01676 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 3 | 3 | B.1.177 | 0.00004 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 3 | 3 | B.1.177 | 0.00004 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 3 | 3 | B.1.177.15 | 0.001893 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 3 | 3 | B.1.2 | 0.000026 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 3 | 3 | B.1.240 | 0.000647 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 3 | 3 | B.1.240.1 | 0.075 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 3 | 3 | B.1.258 | 0.0002 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 3 | 3 | B.1.265 | 0.003812 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 3 | 3 | B.1.36 | 0.000438 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 3 | 3 | B.1.429 | 0.000071 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 3 | 3 | B.1.517 | 0.001281 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 3 | 3 | B.1.525 | 0.000339 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 3 | 3 | B.1.526 | 0.000071 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 3 | 3 | B.1.588 | 0.00273 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 3 | 3 | B.1.596 | 0.000261 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 3 | 3 | B.1.621 | 0.000266 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 3 | 3 | P.1.12 | 0.001452 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 3 | 3 | P.1.12 | 0.001452 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 3 | 3 | P.1.14 | 0.000143 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 3 | 3 | P.1.17.1 | 0.002625 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 3 | 3 | Z.1 | 0.008671 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 2 | 2 | A | 0.000774 |
ORF1ab/nsp10 | 134 | R134P | cGc | cCc | 2 | 2 | All | 0 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | AY.10 | 0.00106 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 2 | 2 | AY.100 | 0.000092 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 2 | 2 | AY.103 | 0.000012 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | AY.113 | 0.000285 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | AY.113 | 0.000285 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | AY.117 | 0.000169 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | AY.117 | 0.000169 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 2 | 2 | AY.117 | 0.000169 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 2 | 2 | AY.119 | 0.000071 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | AY.121 | 0.000271 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | AY.13 | 0.000322 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 2 | AY.13 | 0.000161 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 1 | 2 | AY.13 | 0.000161 |
ORF1ab/nsp10 | 134 | R134H | cGC | cAT | 1 | 2 | AY.13 | 0.000161 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 2 | AY.13 | 0.000161 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 2 | 2 | AY.16 | 0.000759 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | AY.3.1 | 0.000171 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 2 | 2 | AY.34 | 0.000194 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | AY.34 | 0.000194 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | AY.34.1 | 0.00102 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | AY.39.1 | 0.000079 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 2 | 2 | AY.39.1 | 0.000079 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 2 | 2 | AY.39.1 | 0.000079 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 2 | 2 | AY.4.2 | 0.000043 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 2 | 2 | AY.4.2.1 | 0.000298 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 2 | 2 | AY.45 | 0.000243 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | AY.46 | 0.000208 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | AY.46.2 | 0.001271 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | AY.46.6 | 0.000144 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | AY.50 | 0.001599 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | AY.53 | 0.000575 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 2 | 2 | AY.54 | 0.000191 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | AY.55 | 0.001835 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | AY.58 | 0.001815 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | AY.59 | 0.001059 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | AY.69 | 0.000373 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | AY.7 | 0.000392 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | AY.7.2 | 0.001119 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 2 | 2 | AY.74 | 0.000231 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | AY.75 | 0.000112 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 2 | 2 | AY.75 | 0.000112 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | AY.82 | 0.002714 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | AY.9 | 0.000135 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 2 | 2 | AY.9.2 | 0.000073 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | AY.98 | 0.000158 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 2 | 2 | AY.99.1 | 0.003106 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | AZ.3 | 0.00304 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | B.1.1.1 | 0.000653 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | B.1.1.244 | 0.030769 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | B.1.1.306 | 0.000877 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 2 | 2 | B.1.1.347 | 0.036364 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | B.1.1.354 | 0.008772 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | B.1.1.370 | 0.025316 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | B.1.1.416 | 0.00181 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | B.1.1.70 | 0.000682 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 2 | 2 | B.1.177 | 0.000026 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | B.1.177.4 | 0.000422 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | B.1.177.4 | 0.000422 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | B.1.177.43 | 0.002954 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | B.1.177.44 | 0.001038 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | B.1.177.52 | 0.003515 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | B.1.177.73 | 0.001133 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | B.1.177.73 | 0.001133 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 2 | 2 | B.1.177.81 | 0.000379 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | B.1.234 | 0.000264 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | B.1.243 | 0.000139 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | B.1.258.2 | 0.009009 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 2 | 2 | B.1.311 | 0.000549 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | B.1.311 | 0.000549 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | B.1.367 | 0.001585 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | B.1.378 | 0.013699 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | B.1.404 | 0.002604 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | B.1.499 | 0.002101 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 2 | 2 | B.1.565 | 0.001621 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 2 | 2 | B.1.575 | 0.000607 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 2 | 2 | B.1.609 | 0.000959 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 2 | 2 | B.1.619.1 | 0.001283 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 2 | 2 | B.1.627 | 0.00404 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 2 | 2 | C.37 | 0.000232 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 2 | 2 | P.1.10.1 | 0.01626 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 2 | 2 | P.1.7 | 0.000639 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 2 | 2 | P.3 | 0.00319 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | A | 0.000387 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 1 | 1 | A | 0.000387 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | A.2.5.2 | 0.001572 |
ORF1ab/nsp10 | 134 | R134Q | cGC | cAG | 1 | 1 | All | 0 |
ORF1ab/nsp10 | 134 | R134Y | CGc | TAc | 1 | 1 | All | 0 |
ORF1ab/nsp10 | 134 | R134del2 | CGc | --c | 1 | 1 | All | 0 |
ORF1ab/nsp10 | 134 | R134T | CGc | ACc | 1 | 1 | All | 0 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.15 | 0.002222 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | AY.17 | 0.008197 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.21 | 0.001898 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | AY.28 | 0.00189 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.39.2 | 0.001541 |
ORF1ab/nsp10 | 134 | R134P | cGc | cCc | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.4.4 | 0.000409 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | AY.4.4 | 0.000409 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.49 | 0.003195 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | AY.51 | 0.000909 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.51 | 0.000909 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.57 | 0.000656 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp10 | 134 | R134del1 | cgC | cg- | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | AY.77 | 0.001127 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.79 | 0.001211 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 1 | 1 | AY.79 | 0.001211 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | AY.79 | 0.001211 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.8 | 0.000606 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.90 | 0.000684 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.93 | 0.000273 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B | 0.000128 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B | 0.000128 |
ORF1ab/nsp10 | 134 | R134del1 | cgC | cg- | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.1.169 | 0.018182 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.1.170 | 0.001247 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 1 | 1 | B.1.1.177 | 0.019231 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.1.220 | 0.001859 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.1.222 | 0.000204 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.1.240 | 0.004695 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.1.258 | 0.003257 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.1.263 | 0.001558 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.1.286 | 0.002899 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.1.297 | 0.002237 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.1.298 | 0.000862 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.1.301 | 0.001179 |
ORF1ab/nsp10 | 134 | R134del1 | cGC | c-T | 1 | 1 | B.1.1.301 | 0.001179 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.1.328 | 0.016949 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.1.329 | 0.003846 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.1.351 | 0.002793 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.1.376 | 0.005952 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.1.464 | 0.001473 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.1.487 | 0.005587 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.1.517 | 0.006803 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.1.524 | 0.020833 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.1.528 | 0.004808 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.1.61 | 0.008772 |
ORF1ab/nsp10 | 134 | R134P | cGc | cCc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp10 | 134 | R134Y | CGc | TAc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.119 | 0.010526 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.128 | 0.000635 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.146 | 0.004237 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.147 | 0.000756 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.153 | 0.018868 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.157 | 0.002985 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.157 | 0.002985 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgA | 1 | 1 | B.1.160.12 | 0.00641 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.160.18 | 0.007299 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.160.25 | 0.011111 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.160.32 | 0.004292 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.162 | 0.005025 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.170 | 0.00431 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.177.17 | 0.000821 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 1 | 1 | B.1.177.24 | 0.001295 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.177.40 | 0.005155 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.177.42 | 0.000894 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.177.54 | 0.000606 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.177.72 | 0.00339 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.177.72 | 0.00339 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.177.77 | 0.000726 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.177.8 | 0.000752 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.22 | 0.001318 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.235 | 0.002519 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.235 | 0.002519 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.237 | 0.004975 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.239 | 0.001221 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 1 | 1 | B.1.258.10 | 0.011364 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.258.14 | 0.00098 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.258.21 | 0.007752 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.279 | 0.000514 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.280 | 0.007143 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.306 | 0.005714 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.313 | 0.006579 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.326 | 0.007576 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.326 | 0.007576 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 1 | 1 | B.1.326 | 0.007576 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.340 | 0.004292 |
ORF1ab/nsp10 | 134 | R134T | CGc | ACc | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp10 | 134 | R134G | Cgc | Ggc | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.36.10 | 0.004785 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.36.26 | 0.002857 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.36.35 | 0.002604 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.36.35 | 0.002604 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.36.9 | 0.003215 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.371 | 0.001122 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.399 | 0.001934 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.401 | 0.008197 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.416 | 0.001269 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.422 | 0.000812 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.433 | 0.003195 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.462 | 0.007246 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.471 | 0.002732 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.490 | 0.1 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp10 | 134 | R134S | CgC | AgT | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 1 | 1 | B.1.533 | 0.009615 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.546 | 0.003704 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.567 | 0.003333 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.568 | 0.001111 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.596.1 | 0.009346 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp10 | 134 | R134Q | cGC | cAG | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp10 | 134 | R134L | cGC | cTG | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp10 | 134 | R134del2 | CGc | --c | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | B.1.617.3 | 0.002985 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.625 | 0.002353 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | B.1.634 | 0.003425 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.78 | 0.008547 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | B.1.9.5 | 0.005682 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | B.1.94 | 0.027027 |
ORF1ab/nsp10 | 134 | R134L | cGc | cTc | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | C.37.1 | 0.002618 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | C.8 | 0.004464 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | P.1.16 | 0.000374 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | P.1.16 | 0.000374 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp10 | 134 | R134del | CGC | --- | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp10 | 134 | R134C | Cgc | Tgc | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp10 | 134 | R134N | CGc | AAc | 1 | 1 | P.3 | 0.001595 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | P.3 | 0.001595 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp10 | 134 | R134R | cgC | cgT | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp10 | 134 | R134H | cGc | cAc | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp10 | 134 | R134S | Cgc | Agc | 1 | 1 | Q.8 | 0.000165 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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