CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = V86del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp186V86del2V86del2delGTt--t73470.643836521-523
ORF1ab/nsp186V86del2V86del2delGTT--N73230.315068521-523
ORF1ab/nsp186V86del2V86del2delgTTg--7320.0273973521-523
ORF1ab/nsp186V86del2V86del2delGTT--A7310.0136986521-523

Details of the mutation V86del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp186V86del2GTt--t4773All0.000009
ORF1ab/nsp186V86del2GTT--N2373All0.000004
ORF1ab/nsp186V86del2gTTg--273All0
ORF1ab/nsp186V86del2GTT--A173All0
ORF1ab/nsp186V86del2GTT--N67AY.40.000009
ORF1ab/nsp186V86del2GTt--t17AY.40.000002
ORF1ab/nsp186V86del2GTt--t67B.1.1.70.000005
ORF1ab/nsp186V86del2GTT--A17B.1.1.70.000001
ORF1ab/nsp186V86del2GTt--t44B.1.6210.000354
ORF1ab/nsp186V86del2GTt--t33B.1.617.20.000011
ORF1ab/nsp186V86del2GTt--t22AY.39.10.000079
ORF1ab/nsp186V86del2GTt--t12AY.430.000004
ORF1ab/nsp186V86del2GTT--N12AY.430.000004
ORF1ab/nsp186V86del2GTt--t22AY.46.60.000144
ORF1ab/nsp186V86del2GTt--t22B0.000256
ORF1ab/nsp186V86del2GTt--t12B.10.000009
ORF1ab/nsp186V86del2GTT--N12B.10.000009
ORF1ab/nsp186V86del2GTt--t22B.1.1.390.001019
ORF1ab/nsp186V86del2GTt--t22B.1.1110.00235
ORF1ab/nsp186V86del2GTt--t22B.1.5260.000047
ORF1ab/nsp186V86del2gTTg--11A.60.005128
ORF1ab/nsp186V86del2GTt--t11AY.1020.000027
ORF1ab/nsp186V86del2GTt--t11AY.1030.000006
ORF1ab/nsp186V86del2GTt--t11AY.1190.000035
ORF1ab/nsp186V86del2GTT--N11AY.1200.000037
ORF1ab/nsp186V86del2GTt--t11AY.200.000039
ORF1ab/nsp186V86del2GTt--t11AY.230.00007
ORF1ab/nsp186V86del2GTt--t11AY.250.000006
ORF1ab/nsp186V86del2GTt--t11AY.30.00001
ORF1ab/nsp186V86del2GTT--N11AY.350.000233
ORF1ab/nsp186V86del2GTT--N11AY.360.000148
ORF1ab/nsp186V86del2GTt--t11AY.390.000025
ORF1ab/nsp186V86del2GTT--N11AY.4.10.000737
ORF1ab/nsp186V86del2GTT--N11AY.4.20.000022
ORF1ab/nsp186V86del2GTT--N11AY.440.000006
ORF1ab/nsp186V86del2GTt--t11AY.480.000465
ORF1ab/nsp186V86del2GTT--N11AY.610.000105
ORF1ab/nsp186V86del2GTT--N11AY.750.000056
ORF1ab/nsp186V86del2GTt--t11AY.90.000068
ORF1ab/nsp186V86del2GTT--N11B.1.10.000018
ORF1ab/nsp186V86del2GTt--t11B.1.1.3180.000302
ORF1ab/nsp186V86del2gTTg--11B.1.1.3220.008772
ORF1ab/nsp186V86del2GTT--N11B.1.1.3690.000446
ORF1ab/nsp186V86del2GTT--N11B.1.1.40.002976
ORF1ab/nsp186V86del2GTt--t11B.1.1.5190.00004
ORF1ab/nsp186V86del2GTt--t11B.1.160.190.035714
ORF1ab/nsp186V86del2GTT--N11B.1.1770.000013
ORF1ab/nsp186V86del2GTT--N11B.1.177.120.000152
ORF1ab/nsp186V86del2GTT--N11B.1.177.860.000183
ORF1ab/nsp186V86del2GTt--t11B.1.2580.000067
ORF1ab/nsp186V86del2GTT--N11B.1.3890.001002
ORF1ab/nsp186V86del2GTt--t11B.1.5250.000113
ORF1ab/nsp186V86del2GTt--t11B.1.5750.000303
ORF1ab/nsp186V86del2GTt--t11B.1.6370.000073
ORF1ab/nsp186V86del2GTt--t11P.10.000016
ORF1ab/nsp186V86del2GTt--t11P.1.140.000048