CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = V84A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp184V84AV84AnonsyngTtgCt49460.938776515-517
ORF1ab/nsp184V84AV84AnonsyngTTgCC4920.0408163515-517
ORF1ab/nsp184V84AV84AnonsyngTTgCA4910.0204082515-517

Details of the mutation V84A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp184V84AgTtgCt4649All0.000009
ORF1ab/nsp184V84AgTTgCC249All0
ORF1ab/nsp184V84AgTTgCA149All0
ORF1ab/nsp184V84AgTtgCt78B.1.1.70.000006
ORF1ab/nsp184V84AgTTgCC18B.1.1.70.000001
ORF1ab/nsp184V84AgTtgCt55AY.1030.000031
ORF1ab/nsp184V84AgTtgCt55AY.40.000008
ORF1ab/nsp184V84AgTtgCt44AY.250.000024
ORF1ab/nsp184V84AgTtgCt33B.10.000027
ORF1ab/nsp184V84AgTtgCt33C.260.022059
ORF1ab/nsp184V84AgTtgCt22AY.1020.000053
ORF1ab/nsp184V84AgTtgCt22AY.240.000862
ORF1ab/nsp184V84AgTtgCt22AY.440.000012
ORF1ab/nsp184V84AgTtgCt22B.1.1.10.000653
ORF1ab/nsp184V84AgTtgCt22B.1.20.000018
ORF1ab/nsp184V84AgTtgCt11AY.116.10.000311
ORF1ab/nsp184V84AgTtgCt11AY.1190.000035
ORF1ab/nsp184V84AgTtgCt11AY.340.000097
ORF1ab/nsp184V84AgTtgCt11AY.360.000148
ORF1ab/nsp184V84AgTtgCt11AY.99.20.000092
ORF1ab/nsp184V84AgTtgCt11B0.000128
ORF1ab/nsp184V84AgTtgCt11B.1.3510.00003
ORF1ab/nsp184V84AgTTgCC11B.1.5600.00463
ORF1ab/nsp184V84AgTTgCA11B.1.6210.000089
ORF1ab/nsp184V84AgTtgCt11B.6.60.000889
ORF1ab/nsp184V84AgTtgCt11C.350.000774