CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = V60del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp160V60del2V60del2delgTTg--16100.625443-445
ORF1ab/nsp160V60del2V60del2delGTt--t1630.1875443-445
ORF1ab/nsp160V60del2V60del2delGTT--C1620.125443-445
ORF1ab/nsp160V60del2V60del2delGTTA--1610.0625443-445

Details of the mutation V60del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp160V60del2gTTg--1016All0.000002
ORF1ab/nsp160V60del2GTt--t316All0.000001
ORF1ab/nsp160V60del2GTT--C216All0
ORF1ab/nsp160V60del2GTTA--116All0
ORF1ab/nsp160V60del2gTTg--44B.10.000037
ORF1ab/nsp160V60del2GTT--C220.111111
ORF1ab/nsp160V60del2GTt--t22AY.40.000003
ORF1ab/nsp160V60del2gTTg--22B.1.1.70.000002
ORF1ab/nsp160V60del2gTTg--11AY.1180.000063
ORF1ab/nsp160V60del2GTt--t11AY.250.000006
ORF1ab/nsp160V60del2gTTg--11AY.350.000233
ORF1ab/nsp160V60del2gTTg--11B0.000128
ORF1ab/nsp160V60del2gTTg--11B.1.5260.000024
ORF1ab/nsp160V60del2GTTA--11B.1.617.20.000004