CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = V60V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp160V60VV60VsyngtTgtC1747061746290.999559443-445
ORF1ab/nsp160V60VV60VsyngtTgtA174706410.00023468443-445
ORF1ab/nsp160V60VV60VsyngtTgtG174706360.00020606443-445

Details of the mutation V60V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp160V60VgtTgtC174629174706All0.0334
ORF1ab/nsp160V60VgtTgtA41174706All0.000008
ORF1ab/nsp160V60VgtTgtG36174706All0.000007
ORF1ab/nsp160V60VgtTgtC7428874289B.1.1770.978194
ORF1ab/nsp160V60VgtTgtA174289B.1.1770.000013
ORF1ab/nsp160V60VgtTgtC1291512915B.1.177.210.987612
ORF1ab/nsp160V60VgtTgtC65636563B.1.177.120.995601
ORF1ab/nsp160V60VgtTgtC59595959B.1.177.70.982361
ORF1ab/nsp160V60VgtTgtC53435343B.1.177.860.980187
ORF1ab/nsp160V60VgtTgtC52275227B.1.177.810.989587
ORF1ab/nsp160V60VgtTgtC47114711B.1.177.40.994301
ORF1ab/nsp160V60VgtTgtC45554555B.1.177.600.994976
ORF1ab/nsp160V60VgtTgtC35383538B.1.177.570.994099
ORF1ab/nsp160V60VgtTgtC26072607B.1.177.450.9939
ORF1ab/nsp160V60VgtTgtC20872087B.1.177.820.996181
ORF1ab/nsp160V60VgtTgtC18421842B.1.177.440.95589
ORF1ab/nsp160V60VgtTgtC16451645B.1.177.540.997574
ORF1ab/nsp160V60VgtTgtC15831583B.1.177.150.998738
ORF1ab/nsp160V60VgtTgtC15001500B.1.177.650.998004
ORF1ab/nsp160V60VgtTgtC14961496B.1.177.160.99402
ORF1ab/nsp160V60VgtTgtC14911491B.1.177.560.995327
ORF1ab/nsp160V60VgtTgtC14391439B.1.177.350.994471
ORF1ab/nsp160V60VgtTgtC13661366B.1.177.770.992012
ORF1ab/nsp160V60VgtTgtC13631363B.1.177.870.991994
ORF1ab/nsp160V60VgtTgtC13251325B.1.177.80.99699
ORF1ab/nsp160V60VgtTgtC12241225B.10.011211
ORF1ab/nsp160V60VgtTgtA11225B.10.000009
ORF1ab/nsp160V60VgtTgtC12231223B.1.177.730.692525
ORF1ab/nsp160V60VgtTgtC12161216B.1.177.170.998358
ORF1ab/nsp160V60VgtTgtC11391139B.1.177.101
ORF1ab/nsp160V60VgtTgtC11151115B.1.177.420.997317
ORF1ab/nsp160V60VgtTgtC10851085B.1.177.460.996327
ORF1ab/nsp160V60VgtTgtC995995B.1.177.60.97168
ORF1ab/nsp160V60VgtTgtC953953B.1.177.750.991675
ORF1ab/nsp160V60VgtTgtC859859B.1.177.180.99652
ORF1ab/nsp160V60VgtTgtC823823B.1.177.620.98093
ORF1ab/nsp160V60VgtTgtC805805B.1.177.51
ORF1ab/nsp160V60VgtTgtC765765B.1.177.240.990933
ORF1ab/nsp160V60VgtTgtC764764B.1.2210.054269
ORF1ab/nsp160V60VgtTgtC748748B.1.177.580.996005
ORF1ab/nsp160V60VgtTgtC741741B.1.177.90.986684
ORF1ab/nsp160V60VgtTgtC731731W.40.987838
ORF1ab/nsp160V60VgtTgtC726726B.1.177.320.979757
ORF1ab/nsp160V60VgtTgtC698698B.1.177.190.998569
ORF1ab/nsp160V60VgtTgtC672672B.1.177.690.997033
ORF1ab/nsp160V60VgtTgtC669669B.1.177.830.991111
ORF1ab/nsp160V60VgtTgtC654654B.1.177.200.992413
ORF1ab/nsp160V60VgtTgtC640640B.1.177.430.945347
ORF1ab/nsp160V60VgtTgtC601601B.1.177.330.988487
ORF1ab/nsp160V60VgtTgtC587587B.1.177.110.996604
ORF1ab/nsp160V60VgtTgtC560560B.1.177.520.984183
ORF1ab/nsp160V60VgtTgtC523523B.1.177.801
ORF1ab/nsp160V60VgtTgtC427427B.1.177.550.995338
ORF1ab/nsp160V60VgtTgtC427427B.1.177.791
ORF1ab/nsp160V60VgtTgtC417417B.1.177.530.997608
ORF1ab/nsp160V60VgtTgtC398398B.1.177.760.992519
ORF1ab/nsp160V60VgtTgtC394394B.1.177.300.98995
ORF1ab/nsp160V60VgtTgtC390390B.1.177.410.975
ORF1ab/nsp160V60VgtTgtC368368B.1.177.630.994595
ORF1ab/nsp160V60VgtTgtC344344Z.10.99422
ORF1ab/nsp160V60VgtTgtC317317B.1.177.480.990625
ORF1ab/nsp160V60VgtTgtC293293B.1.177.230.94822
ORF1ab/nsp160V60VgtTgtC293293B.1.177.720.99322
ORF1ab/nsp160V60VgtTgtC259259U.31
ORF1ab/nsp160V60VgtTgtC220224B.1.10.003991
ORF1ab/nsp160V60VgtTgtA3224B.1.10.000054
ORF1ab/nsp160V60VgtTgtG1224B.1.10.000018
ORF1ab/nsp160V60VgtTgtC219219B.1.177.20.995455
ORF1ab/nsp160V60VgtTgtC212212B.1.177.510.968037
ORF1ab/nsp160V60VgtTgtC208208B.1.177.500.976526
ORF1ab/nsp160V60VgtTgtC202202W.20.975845
ORF1ab/nsp160V60VgtTgtC193193B.1.177.400.994845
ORF1ab/nsp160V60VgtTgtC189189W.30.994737
ORF1ab/nsp160V60VgtTgtC181181B.1.177.850.983696
ORF1ab/nsp160V60VgtTgtC166166B.1.177.700.982249
ORF1ab/nsp160V60VgtTgtC164164B.1.177.141
ORF1ab/nsp160V60VgtTgtC143143B.1.177.840.953333
ORF1ab/nsp160V60VgtTgtC141141B.1.177.260.986014
ORF1ab/nsp160V60VgtTgtC137137AA.10.992754
ORF1ab/nsp160V60VgtTgtC134134B.1.177.280.992593
ORF1ab/nsp160V60VgtTgtC131131B.1.177.31
ORF1ab/nsp160V60VgtTgtC130130AA.21
ORF1ab/nsp160V60VgtTgtC130130B.1.177.670.992366
ORF1ab/nsp160V60VgtTgtC126129B.1.1.70.000113
ORF1ab/nsp160V60VgtTgtG3129B.1.1.70.000003
ORF1ab/nsp160V60VgtTgtC114114B.1.160.300.339286
ORF1ab/nsp160V60VgtTgtC114114U.21
ORF1ab/nsp160V60VgtTgtC114114W.10.991304
ORF1ab/nsp160V60VgtTgtC110110AA.41
ORF1ab/nsp160V60VgtTgtC109109AA.71
ORF1ab/nsp160V60VgtTgtC106106B.1.177.271
ORF1ab/nsp160V60VgtTgtC103103B.1.177.781
ORF1ab/nsp160V60VgtTgtC9999B.1.177.711
ORF1ab/nsp160V60VgtTgtC9696B.1.177.381
ORF1ab/nsp160V60VgtTgtC9090B.1.1600.002807
ORF1ab/nsp160V60VgtTgtC8080B.1.177.880.987654
ORF1ab/nsp160V60VgtTgtC7878U.11
ORF1ab/nsp160V60VgtTgtC7676Y.10.974359
ORF1ab/nsp160V60VgtTgtC7474B.1.177.470.961039
ORF1ab/nsp160V60VgtTgtC6969AY.1190.002436
ORF1ab/nsp160V60VgtTgtC6767B.1.177.251
ORF1ab/nsp160V60VgtTgtC6565B.1.177.391
ORF1ab/nsp160V60VgtTgtC6565B.1.177.680.984848
ORF1ab/nsp160V60VgtTgtC6262AA.51
ORF1ab/nsp160V60VgtTgtC6262AA.61
ORF1ab/nsp160V60VgtTgtC6262B.1.177.591
ORF1ab/nsp160V60VgtTgtC6262B.1.177.740.939394
ORF1ab/nsp160V60VgtTgtC6060B.1.177.360.967742
ORF1ab/nsp160V60VgtTgtC4545AA.81
ORF1ab/nsp160V60VgtTgtC4545XA1
ORF1ab/nsp160V60VgtTgtC4444V.11
ORF1ab/nsp160V60VgtTgtC4242B.1.177.310.482759
ORF1ab/nsp160V60VgtTgtC4141B.1.2580.002728
ORF1ab/nsp160V60VgtTgtC3737AA.31
ORF1ab/nsp160V60VgtTgtC3737B.1.177.371
ORF1ab/nsp160V60VgtTgtC3636B.1.177.890.878049
ORF1ab/nsp160V60VgtTgtC1933AY.40.00003
ORF1ab/nsp160V60VgtTgtG1033AY.40.000016
ORF1ab/nsp160V60VgtTgtA433AY.40.000006
ORF1ab/nsp160V60VgtTgtC2831AY.250.000168
ORF1ab/nsp160V60VgtTgtG331AY.250.000018
ORF1ab/nsp160V60VgtTgtC3131V.21
ORF1ab/nsp160V60VgtTgtC3030B.1.160.200.267857
ORF1ab/nsp160V60VgtTgtC2626B.1.177.490.962963
ORF1ab/nsp160V60VgtTgtC2626B.1.360.003793
ORF1ab/nsp160V60VgtTgtC2424B.1.177.661
ORF1ab/nsp160V60VgtTgtC2323B.1.177.611
ORF1ab/nsp160V60VgtTgtA1919AY.46.40.003126
ORF1ab/nsp160V60VgtTgtC1818B0.002301
ORF1ab/nsp160V60VgtTgtC1818B.1.177.340.947368
ORF1ab/nsp160V60VgtTgtC1518B.1.20.000132
ORF1ab/nsp160V60VgtTgtG318B.1.20.000026
ORF1ab/nsp160V60VgtTgtC1818C.370.002089
ORF1ab/nsp160V60VgtTgtC1717B.1.1.390.008665
ORF1ab/nsp160V60VgtTgtC1717B.1.36.390.037694
ORF1ab/nsp160V60VgtTgtC1515B.1.1.1350.070423
ORF1ab/nsp160V60VgtTgtC1515B.1.177.291
ORF1ab/nsp160V60VgtTgtC1214AY.440.000073
ORF1ab/nsp160V60VgtTgtG114AY.440.000006
ORF1ab/nsp160V60VgtTgtA114AY.440.000006
ORF1ab/nsp160V60VgtTgtC514B.1.617.20.000019
ORF1ab/nsp160V60VgtTgtG514B.1.617.20.000019
ORF1ab/nsp160V60VgtTgtA414B.1.617.20.000015
ORF1ab/nsp160V60VgtTgtG711AY.1000.000322
ORF1ab/nsp160V60VgtTgtC411AY.1000.000184
ORF1ab/nsp160V60VgtTgtC1111B.1.177.641
ORF1ab/nsp160V60VgtTgtC99AY.1030.000056
ORF1ab/nsp160V60VgtTgtC88AY.4.20.000174
ORF1ab/nsp160V60VgtTgtC88AY.430.000035
ORF1ab/nsp160V60VgtTgtC88B.1.160.320.034335
ORF1ab/nsp160V60VgtTgtC77AY.260.000198
ORF1ab/nsp160V60VgtTgtC77B.1.1.700.002387
ORF1ab/nsp160V60VgtTgtC77B.4.10.132075
ORF1ab/nsp160V60VgtTgtC66AY.30.00006
ORF1ab/nsp160V60VgtTgtC66B.1.258.110.002378
ORF1ab/nsp160V60VgtTgtC66B.1.416.10.009375
ORF1ab/nsp160V60VgtTgtC46B.1.5090.003463
ORF1ab/nsp160V60VgtTgtG26B.1.5090.001732
ORF1ab/nsp160V60VgtTgtC55AY.1180.000313
ORF1ab/nsp160V60VgtTgtC45AY.3.10.000341
ORF1ab/nsp160V60VgtTgtA15AY.3.10.000085
ORF1ab/nsp160V60VgtTgtC55B.1.1.1700.006234
ORF1ab/nsp160V60VgtTgtC55B.1.1.3110.001791
ORF1ab/nsp160V60VgtTgtC55P.10.000079
ORF1ab/nsp160V60VgtTgtC55P.20.000933
ORF1ab/nsp160V60VgtTgtC34AY.1020.00008
ORF1ab/nsp160V60VgtTgtA14AY.1020.000027
ORF1ab/nsp160V60VgtTgtC44B.1.1.3150.033898
ORF1ab/nsp160V60VgtTgtC44B.1.1.370.000771
ORF1ab/nsp160V60VgtTgtC44B.1.160.160.003717
ORF1ab/nsp160V60VgtTgtC44B.1.3510.000119
ORF1ab/nsp160V60VgtTgtC44B.1.5960.000349
ORF1ab/nsp160V60VgtTgtC44Q.10.000505
ORF1ab/nsp160V60VgtTgtC33AY.230.000209
ORF1ab/nsp160V60VgtTgtC33AY.390.000074
ORF1ab/nsp160V60VgtTgtC33AY.60.000123
ORF1ab/nsp160V60VgtTgtC33B.1.1.2200.005576
ORF1ab/nsp160V60VgtTgtC33B.1.1.3180.000905
ORF1ab/nsp160V60VgtTgtC33B.1.160.280.008772
ORF1ab/nsp160V60VgtTgtC33B.1.258.170.000312
ORF1ab/nsp160V60VgtTgtC33B.1.4730.057692
ORF1ab/nsp160V60VgtTgtC33B.1.5760.00272
ORF1ab/nsp160V60VgtTgtC220.111111
ORF1ab/nsp160V60VgtTgtC22A0.000774
ORF1ab/nsp160V60VgtTgtC22AY.39.10.000079
ORF1ab/nsp160V60VgtTgtC22AY.750.000112
ORF1ab/nsp160V60VgtTgtC22AY.910.001461
ORF1ab/nsp160V60VgtTgtC22AY.980.000158
ORF1ab/nsp160V60VgtTgtC22B.1.1.10.000653
ORF1ab/nsp160V60VgtTgtC22B.1.1.1410.004024
ORF1ab/nsp160V60VgtTgtC22B.1.1.330.000842
ORF1ab/nsp160V60VgtTgtC22B.1.1.4090.005666
ORF1ab/nsp160V60VgtTgtC22B.1.1.4210.060606
ORF1ab/nsp160V60VgtTgtC22B.1.1.4340.000697
ORF1ab/nsp160V60VgtTgtC22B.1.1.5210.010695
ORF1ab/nsp160V60VgtTgtC22B.1.1390.001466
ORF1ab/nsp160V60VgtTgtC22B.1.160.100.016129
ORF1ab/nsp160V60VgtTgtC22B.1.160.140.004237
ORF1ab/nsp160V60VgtTgtC22B.1.160.90.014388
ORF1ab/nsp160V60VgtTgtC22B.1.2360.004107
ORF1ab/nsp160V60VgtTgtC22B.1.2400.000431
ORF1ab/nsp160V60VgtTgtC22B.1.36.170.000988
ORF1ab/nsp160V60VgtTgtC22B.1.3750.001639
ORF1ab/nsp160V60VgtTgtC22B.1.3890.002004
ORF1ab/nsp160V60VgtTgtC22B.1.4620.014493
ORF1ab/nsp160V60VgtTgtC22B.1.5300.014286
ORF1ab/nsp160V60VgtTgtC22B.1.5990.007299
ORF1ab/nsp160V60VgtTgtC22B.1.6090.000959
ORF1ab/nsp160V60VgtTgtC22C.300.003454
ORF1ab/nsp160V60VgtTgtC22P.1.120.000968
ORF1ab/nsp160V60VgtTgtC22P.1.140.000096
ORF1ab/nsp160V60VgtTgtC11A.2.50.000499
ORF1ab/nsp160V60VgtTgtC11A.210.00277
ORF1ab/nsp160V60VgtTgtC11A.220.066667
ORF1ab/nsp160V60VgtTgtC11AD.20.000219
ORF1ab/nsp160V60VgtTgtC11AE.80.000489
ORF1ab/nsp160V60VgtTgtC11AF.10.037037
ORF1ab/nsp160V60VgtTgtC11AP.10.001502
ORF1ab/nsp160V60VgtTgtC11AY.1100.000113
ORF1ab/nsp160V60VgtTgtC11AY.120.000316
ORF1ab/nsp160V60VgtTgtC11AY.200.000039
ORF1ab/nsp160V60VgtTgtC11AY.320.000532
ORF1ab/nsp160V60VgtTgtC11AY.330.000067
ORF1ab/nsp160V60VgtTgtC11AY.4.2.10.000149
ORF1ab/nsp160V60VgtTgtA11AY.460.000104
ORF1ab/nsp160V60VgtTgtC11AY.50.000021
ORF1ab/nsp160V60VgtTgtC11AY.530.000288
ORF1ab/nsp160V60VgtTgtG11AY.570.000656
ORF1ab/nsp160V60VgtTgtC11AY.9.10.000084
ORF1ab/nsp160V60VgtTgtC11AY.940.000443
ORF1ab/nsp160V60VgtTgtA11AY.99.20.000092
ORF1ab/nsp160V60VgtTgtC11B.1.1.1530.001095
ORF1ab/nsp160V60VgtTgtC11B.1.1.1890.001513
ORF1ab/nsp160V60VgtTgtC11B.1.1.2040.00304
ORF1ab/nsp160V60VgtTgtC11B.1.1.2430.004082
ORF1ab/nsp160V60VgtTgtC11B.1.1.250.000569
ORF1ab/nsp160V60VgtTgtC11B.1.1.2770.000759
ORF1ab/nsp160V60VgtTgtC11B.1.1.280.000311
ORF1ab/nsp160V60VgtTgtC11B.1.1.2880.001916
ORF1ab/nsp160V60VgtTgtC11B.1.1.3050.003861
ORF1ab/nsp160V60VgtTgtA11B.1.1.3060.000438
ORF1ab/nsp160V60VgtTgtC11B.1.1.3680.003086
ORF1ab/nsp160V60VgtTgtC11B.1.1.3720.000689
ORF1ab/nsp160V60VgtTgtC11B.1.1.4050.083333
ORF1ab/nsp160V60VgtTgtC11B.1.1.4330.001425
ORF1ab/nsp160V60VgtTgtC11B.1.1.440.00241
ORF1ab/nsp160V60VgtTgtA11B.1.1.460.004367
ORF1ab/nsp160V60VgtTgtC11B.1.1.470.005348
ORF1ab/nsp160V60VgtTgtC11B.1.1.5190.00004
ORF1ab/nsp160V60VgtTgtC11B.1.1.5260.003546
ORF1ab/nsp160V60VgtTgtC11B.1.1570.002985
ORF1ab/nsp160V60VgtTgtC11B.1.160.260.002421
ORF1ab/nsp160V60VgtTgtC11B.1.160.290.004219
ORF1ab/nsp160V60VgtTgtC11B.1.220.001318
ORF1ab/nsp160V60VgtTgtC11B.1.2220.001692
ORF1ab/nsp160V60VgtTgtC11B.1.2430.00007
ORF1ab/nsp160V60VgtTgtC11B.1.2680.010417
ORF1ab/nsp160V60VgtTgtC11B.1.2810.021739
ORF1ab/nsp160V60VgtTgtC11B.1.3010.005917
ORF1ab/nsp160V60VgtTgtC11B.1.36.270.000763
ORF1ab/nsp160V60VgtTgtC11B.1.36.90.003215
ORF1ab/nsp160V60VgtTgtC11B.1.3660.004878
ORF1ab/nsp160V60VgtTgtC11B.1.3670.000792
ORF1ab/nsp160V60VgtTgtA11B.1.4090.000781
ORF1ab/nsp160V60VgtTgtC11B.1.4270.00005
ORF1ab/nsp160V60VgtTgtA11B.1.4290.000024
ORF1ab/nsp160V60VgtTgtC11B.1.4370.020833
ORF1ab/nsp160V60VgtTgtC11B.1.438.10.000107
ORF1ab/nsp160V60VgtTgtC11B.1.4560.003268
ORF1ab/nsp160V60VgtTgtC11B.1.4660.023256
ORF1ab/nsp160V60VgtTgtC11B.1.4700.001404
ORF1ab/nsp160V60VgtTgtC11B.1.4990.00105
ORF1ab/nsp160V60VgtTgtC11B.1.5230.002451
ORF1ab/nsp160V60VgtTgtC11B.1.5260.000024
ORF1ab/nsp160V60VgtTgtC11B.1.5400.009709
ORF1ab/nsp160V60VgtTgtC11B.1.5810.009434
ORF1ab/nsp160V60VgtTgtC11B.1.6060.006024
ORF1ab/nsp160V60VgtTgtC11B.1.6360.006711
ORF1ab/nsp160V60VgtTgtC11B.1.780.008547
ORF1ab/nsp160V60VgtTgtC11D.20.000075
ORF1ab/nsp160V60VgtTgtC11P.1.10.000318
ORF1ab/nsp160V60VgtTgtC11R.10.00009