CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = V5V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15V5VV5VsyngtCgtT181117150.946991278-280
ORF1ab/nsp15V5VV5VsyngtCgtA1811950.0524572278-280
ORF1ab/nsp15V5VV5VsyngtCgtG181110.000552181278-280

Details of the mutation V5V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15V5VgtCgtT17151811All0.000328
ORF1ab/nsp15V5VgtCgtA951811All0.000018
ORF1ab/nsp15V5VgtCgtG11811All0
ORF1ab/nsp15V5VgtCgtT226239B.1.1.70.000202
ORF1ab/nsp15V5VgtCgtA13239B.1.1.70.000012
ORF1ab/nsp15V5VgtCgtT228232AY.430.00101
ORF1ab/nsp15V5VgtCgtA3232AY.430.000013
ORF1ab/nsp15V5VgtCgtG1232AY.430.000004
ORF1ab/nsp15V5VgtCgtT142159B.1.617.20.000535
ORF1ab/nsp15V5VgtCgtA17159B.1.617.20.000064
ORF1ab/nsp15V5VgtCgtT127127AY.440.000773
ORF1ab/nsp15V5VgtCgtT9191AY.410.026749
ORF1ab/nsp15V5VgtCgtT8686B.1.2430.005984
ORF1ab/nsp15V5VgtCgtT8080A.280.21164
ORF1ab/nsp15V5VgtCgtT6465B.1.20.000564
ORF1ab/nsp15V5VgtCgtA165B.1.20.000009
ORF1ab/nsp15V5VgtCgtT5859AY.40.00009
ORF1ab/nsp15V5VgtCgtA159AY.40.000002
ORF1ab/nsp15V5VgtCgtT3545AY.250.000211
ORF1ab/nsp15V5VgtCgtA1045AY.250.00006
ORF1ab/nsp15V5VgtCgtT3636AY.470.00112
ORF1ab/nsp15V5VgtCgtT2833AY.390.000692
ORF1ab/nsp15V5VgtCgtA533AY.390.000124
ORF1ab/nsp15V5VgtCgtT3031AY.30.000298
ORF1ab/nsp15V5VgtCgtA131AY.30.00001
ORF1ab/nsp15V5VgtCgtT3030AY.330.002003
ORF1ab/nsp15V5VgtCgtT2527B.10.000229
ORF1ab/nsp15V5VgtCgtA227B.10.000018
ORF1ab/nsp15V5VgtCgtA1424B.1.1770.000184
ORF1ab/nsp15V5VgtCgtT1024B.1.1770.000132
ORF1ab/nsp15V5VgtCgtT2020AY.70.00392
ORF1ab/nsp15V5VgtCgtA1419AY.1020.000371
ORF1ab/nsp15V5VgtCgtT519AY.1020.000133
ORF1ab/nsp15V5VgtCgtT1718AY.1030.000106
ORF1ab/nsp15V5VgtCgtA118AY.1030.000006
ORF1ab/nsp15V5VgtCgtT1616B.1.1600.000499
ORF1ab/nsp15V5VgtCgtT1313B.1.177.340.684211
ORF1ab/nsp15V5VgtCgtT1313B.1.2320.006985
ORF1ab/nsp15V5VgtCgtT1313C.370.001509
ORF1ab/nsp15V5VgtCgtT1212AY.1210.001624
ORF1ab/nsp15V5VgtCgtT1111B.1.10.0002
ORF1ab/nsp15V5VgtCgtT1111B.1.3510.000327
ORF1ab/nsp15V5VgtCgtT1111B.1.4290.000259
ORF1ab/nsp15V5VgtCgtT1111B.1.5960.000959
ORF1ab/nsp15V5VgtCgtT1010AY.1000.00046
ORF1ab/nsp15V5VgtCgtT99AY.200.00035
ORF1ab/nsp15V5VgtCgtT99B.1.36.310.015762
ORF1ab/nsp15V5VgtCgtT99P.10.000142
ORF1ab/nsp15V5VgtCgtT88AY.290.000126
ORF1ab/nsp15V5VgtCgtT88B.1.2580.000532
ORF1ab/nsp15V5VgtCgtT77B.1.1.700.002387
ORF1ab/nsp15V5VgtCgtT77B.1.177.90.009321
ORF1ab/nsp15V5VgtCgtT66B.1.258.140.005882
ORF1ab/nsp15V5VgtCgtT66B.1.4270.000303
ORF1ab/nsp15V5VgtCgtT55AY.610.000524
ORF1ab/nsp15V5VgtCgtT55AY.690.000933
ORF1ab/nsp15V5VgtCgtT55B.1.1.3160.004625
ORF1ab/nsp15V5VgtCgtT55B.1.1.3620.02809
ORF1ab/nsp15V5VgtCgtT55B.1.1.5190.000199
ORF1ab/nsp15V5VgtCgtT55B.1.30.013089
ORF1ab/nsp15V5VgtCgtT44AY.360.000593
ORF1ab/nsp15V5VgtCgtT44AY.4.20.000087
ORF1ab/nsp15V5VgtCgtA24AY.460.000208
ORF1ab/nsp15V5VgtCgtT24AY.460.000208
ORF1ab/nsp15V5VgtCgtT44AY.980.000316
ORF1ab/nsp15V5VgtCgtT44B.1.1.2140.000222
ORF1ab/nsp15V5VgtCgtT44B.1.36.290.002069
ORF1ab/nsp15V5VgtCgtT33AY.1180.000188
ORF1ab/nsp15V5VgtCgtT23AY.140.000176
ORF1ab/nsp15V5VgtCgtA13AY.140.000088
ORF1ab/nsp15V5VgtCgtT33AY.260.000085
ORF1ab/nsp15V5VgtCgtT33AY.50.000062
ORF1ab/nsp15V5VgtCgtT33AY.590.001589
ORF1ab/nsp15V5VgtCgtT33AY.640.001786
ORF1ab/nsp15V5VgtCgtT33AY.9.20.00011
ORF1ab/nsp15V5VgtCgtT33B.1.110.30.002155
ORF1ab/nsp15V5VgtCgtT33B.1.1610.051724
ORF1ab/nsp15V5VgtCgtT33B.1.466.20.001174
ORF1ab/nsp15V5VgtCgtT33B.1.5770.002062
ORF1ab/nsp15V5VgtCgtT33B.1.5820.001472
ORF1ab/nsp15V5VgtCgtT22AY.160.000759
ORF1ab/nsp15V5VgtCgtT22AY.230.000139
ORF1ab/nsp15V5VgtCgtT22AY.270.000129
ORF1ab/nsp15V5VgtCgtT22AY.29.10.000441
ORF1ab/nsp15V5VgtCgtT22AY.3.10.000171
ORF1ab/nsp15V5VgtCgtA22AY.46.50.000397
ORF1ab/nsp15V5VgtCgtT22AY.560.00321
ORF1ab/nsp15V5VgtCgtA12AY.60.000041
ORF1ab/nsp15V5VgtCgtT12AY.60.000041
ORF1ab/nsp15V5VgtCgtA12AY.750.000056
ORF1ab/nsp15V5VgtCgtT12AY.750.000056
ORF1ab/nsp15V5VgtCgtT22AY.75.10.000361
ORF1ab/nsp15V5VgtCgtT22AY.900.001369
ORF1ab/nsp15V5VgtCgtT22AY.920.000575
ORF1ab/nsp15V5VgtCgtT22B.1.1.2200.003717
ORF1ab/nsp15V5VgtCgtT22B.1.1.2220.000408
ORF1ab/nsp15V5VgtCgtT22B.1.1.3480.001592
ORF1ab/nsp15V5VgtCgtT22B.1.1.3980.006452
ORF1ab/nsp15V5VgtCgtT22B.1.1.5120.057143
ORF1ab/nsp15V5VgtCgtT22B.1.177.730.001133
ORF1ab/nsp15V5VgtCgtT22B.1.2210.000142
ORF1ab/nsp15V5VgtCgtT22B.1.3110.000549
ORF1ab/nsp15V5VgtCgtT22B.1.3780.013699
ORF1ab/nsp15V5VgtCgtT22B.1.5260.000047
ORF1ab/nsp15V5VgtCgtT22B.1.5950.000522
ORF1ab/nsp15V5VgtCgtT22B.550.0059
ORF1ab/nsp15V5VgtCgtT22D.20.00015
ORF1ab/nsp15V5VgtCgtA12P.20.000187
ORF1ab/nsp15V5VgtCgtT12P.20.000187
ORF1ab/nsp15V5VgtCgtT22Q.80.00033
ORF1ab/nsp15V5VgtCgtT11A0.000387
ORF1ab/nsp15V5VgtCgtT11A.20.000662
ORF1ab/nsp15V5VgtCgtT11A.2.5.10.004808
ORF1ab/nsp15V5VgtCgtT11AD.20.000219
ORF1ab/nsp15V5VgtCgtT11AY.1070.000466
ORF1ab/nsp15V5VgtCgtT11AY.1110.000183
ORF1ab/nsp15V5VgtCgtA11AY.1160.000287
ORF1ab/nsp15V5VgtCgtT11AY.1190.000035
ORF1ab/nsp15V5VgtCgtT11AY.1200.000037
ORF1ab/nsp15V5VgtCgtA11AY.320.000532
ORF1ab/nsp15V5VgtCgtT11AY.340.000097
ORF1ab/nsp15V5VgtCgtT11AY.4.50.000107
ORF1ab/nsp15V5VgtCgtT11AY.450.000122
ORF1ab/nsp15V5VgtCgtT11AY.46.20.000635
ORF1ab/nsp15V5VgtCgtA11AY.5.40.000277
ORF1ab/nsp15V5VgtCgtA11AY.520.000814
ORF1ab/nsp15V5VgtCgtT11AY.540.000095
ORF1ab/nsp15V5VgtCgtT11AY.620.000436
ORF1ab/nsp15V5VgtCgtT11AY.7.20.000559
ORF1ab/nsp15V5VgtCgtT11AY.910.00073
ORF1ab/nsp15V5VgtCgtA11AY.98.10.000048
ORF1ab/nsp15V5VgtCgtT11B0.000128
ORF1ab/nsp15V5VgtCgtT11B.1.1.1170.009709
ORF1ab/nsp15V5VgtCgtT11B.1.1.1340.011364
ORF1ab/nsp15V5VgtCgtT11B.1.1.1480.008772
ORF1ab/nsp15V5VgtCgtT11B.1.1.2840.000107
ORF1ab/nsp15V5VgtCgtT11B.1.1.3750.011905
ORF1ab/nsp15V5VgtCgtT11B.1.1.4340.000349
ORF1ab/nsp15V5VgtCgtT11B.1.177.40.000211
ORF1ab/nsp15V5VgtCgtT11B.1.177.860.000183
ORF1ab/nsp15V5VgtCgtT11B.1.214.20.0006
ORF1ab/nsp15V5VgtCgtT11B.1.2340.000132
ORF1ab/nsp15V5VgtCgtT11B.1.2400.000216
ORF1ab/nsp15V5VgtCgtT11B.1.258.170.000104
ORF1ab/nsp15V5VgtCgtT11B.1.2770.02381
ORF1ab/nsp15V5VgtCgtT11B.1.3460.001311
ORF1ab/nsp15V5VgtCgtT11B.1.3490.000715
ORF1ab/nsp15V5VgtCgtT11B.1.351.20.000303
ORF1ab/nsp15V5VgtCgtT11B.1.351.30.000876
ORF1ab/nsp15V5VgtCgtT11B.1.3690.000285
ORF1ab/nsp15V5VgtCgtT11B.1.3910.001127
ORF1ab/nsp15V5VgtCgtT11B.1.4390.005917
ORF1ab/nsp15V5VgtCgtT11B.1.4590.004082
ORF1ab/nsp15V5VgtCgtT11B.1.4690.00361
ORF1ab/nsp15V5VgtCgtT11B.1.4990.00105
ORF1ab/nsp15V5VgtCgtT11B.1.5500.013699
ORF1ab/nsp15V5VgtCgtT11B.1.5750.000303
ORF1ab/nsp15V5VgtCgtT11B.1.6210.000089
ORF1ab/nsp15V5VgtCgtT11B.1.6270.00202
ORF1ab/nsp15V5VgtCgtT11B.1.6370.000073
ORF1ab/nsp15V5VgtCgtT11C.1.20.004255
ORF1ab/nsp15V5VgtCgtT11C.37.10.002618
ORF1ab/nsp15V5VgtCgtT11P.1.10.000318
ORF1ab/nsp15V5VgtCgtT11P.1.130.000898
ORF1ab/nsp15V5VgtCgtT11Q.20.000613
ORF1ab/nsp15V5VgtCgtT11Q.40.000455