CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = V169A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1169V169AV169AnonsyngTtgCt2552540.996078770-772
ORF1ab/nsp1169V169AV169AnonsyngTTgCA25510.00392157770-772

Details of the mutation V169A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1169V169AgTtgCt254255All0.000049
ORF1ab/nsp1169V169AgTTgCA1255All0
ORF1ab/nsp1169V169AgTtgCt130130AY.40.000202
ORF1ab/nsp1169V169AgTtgCt1717B.1.20.00015
ORF1ab/nsp1169V169AgTtgCt1515AY.30.000149
ORF1ab/nsp1169V169AgTtgCt1111B.1.1.70.00001
ORF1ab/nsp1169V169AgTtgCt88AY.430.000035
ORF1ab/nsp1169V169AgTtgCt88B.1.2210.000568
ORF1ab/nsp1169V169AgTtgCt77B.1.617.20.000026
ORF1ab/nsp1169V169AgTtgCt66AY.290.000095
ORF1ab/nsp1169V169AgTtgCt55B.10.000046
ORF1ab/nsp1169V169AgTtgCt55B.1.1770.000066
ORF1ab/nsp1169V169AgTtgCt44A0.001548
ORF1ab/nsp1169V169AgTtgCt44AY.1030.000025
ORF1ab/nsp1169V169AgTtgCt44B.1.5960.000349
ORF1ab/nsp1169V169AgTtgCt33AY.330.0002
ORF1ab/nsp1169V169AgTtgCt33AY.70.000588
ORF1ab/nsp1169V169AgTtgCt120.055556
ORF1ab/nsp1169V169AgTTgCA120.055556
ORF1ab/nsp1169V169AgTtgCt22AY.440.000012
ORF1ab/nsp1169V169AgTtgCt22B.1.1.2220.000408
ORF1ab/nsp1169V169AgTtgCt22B.1.1.5190.000079
ORF1ab/nsp1169V169AgTtgCt11AY.1180.000063
ORF1ab/nsp1169V169AgTtgCt11AY.1200.000037
ORF1ab/nsp1169V169AgTtgCt11AY.270.000065
ORF1ab/nsp1169V169AgTtgCt11AY.34.10.00051
ORF1ab/nsp1169V169AgTtgCt11AY.470.000031
ORF1ab/nsp1169V169AgTtgCt11AY.60.000041
ORF1ab/nsp1169V169AgTtgCt11AY.710.000475
ORF1ab/nsp1169V169AgTtgCt11AY.790.001211
ORF1ab/nsp1169V169AgTtgCt11AY.99.20.000092
ORF1ab/nsp1169V169AgTtgCt11B.1.1.2430.004082
ORF1ab/nsp1169V169AgTtgCt11B.1.1.330.000421
ORF1ab/nsp1169V169AgTtgCt11B.1.1.3980.003226
ORF1ab/nsp1169V169AgTtgCt11B.1.177.560.000668
ORF1ab/nsp1169V169AgTtgCt11B.1.4290.000024
ORF1ab/nsp1169V169AgTtgCt11B.1.5230.002451
ORF1ab/nsp1169V169AgTtgCt11D.20.000075
ORF1ab/nsp1169V169AgTtgCt11P.10.000016