CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = V111L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1111V111LV111LnonsynGtgTtg3233110.962848596-598
ORF1ab/nsp1111V111LV111LnonsynGtgCtg32390.0278638596-598
ORF1ab/nsp1111V111LV111LnonsynGtGCtA32330.00928793596-598

Details of the mutation V111L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1111V111LGtgTtg311323All0.000059
ORF1ab/nsp1111V111LGtgCtg9323All0.000002
ORF1ab/nsp1111V111LGtGCtA3323All0.000001
ORF1ab/nsp1111V111LGtgTtg4041B.1.1.70.000036
ORF1ab/nsp1111V111LGtgCtg141B.1.1.70.000001
ORF1ab/nsp1111V111LGtgTtg3737B.1.1.1690.672727
ORF1ab/nsp1111V111LGtgTtg1819B.1.1770.000237
ORF1ab/nsp1111V111LGtgCtg119B.1.1770.000013
ORF1ab/nsp1111V111LGtgTtg1418AY.40.000022
ORF1ab/nsp1111V111LGtGCtA318AY.40.000005
ORF1ab/nsp1111V111LGtgCtg118AY.40.000002
ORF1ab/nsp1111V111LGtgTtg1617AY.30.000159
ORF1ab/nsp1111V111LGtgCtg117AY.30.00001
ORF1ab/nsp1111V111LGtgTtg1616AY.430.000071
ORF1ab/nsp1111V111LGtgTtg1414B.1.617.20.000053
ORF1ab/nsp1111V111LGtgTtg1313AY.1030.000081
ORF1ab/nsp1111V111LGtgTtg1313P.10.000205
ORF1ab/nsp1111V111LGtgTtg1112B.10.000101
ORF1ab/nsp1111V111LGtgCtg112B.10.000009
ORF1ab/nsp1111V111LGtgTtg1111AY.440.000067
ORF1ab/nsp1111V111LGtgTtg99AY.250.000054
ORF1ab/nsp1111V111LGtgTtg88B.1.177.580.010652
ORF1ab/nsp1111V111LGtgTtg88D.20.0006
ORF1ab/nsp1111V111LGtgTtg77AY.290.00011
ORF1ab/nsp1111V111LGtgTtg66AY.1020.000159
ORF1ab/nsp1111V111LGtgTtg44AY.9.10.000335
ORF1ab/nsp1111V111LGtgTtg44B.1.20.000035
ORF1ab/nsp1111V111LGtgTtg44B.1.360.000584
ORF1ab/nsp1111V111LGtgTtg44B.1.4590.016327
ORF1ab/nsp1111V111LGtgTtg44B.1.5510.005161
ORF1ab/nsp1111V111LGtgTtg23B.1.10.000036
ORF1ab/nsp1111V111LGtgCtg13B.1.10.000018
ORF1ab/nsp1111V111LGtgTtg22AY.1000.000092
ORF1ab/nsp1111V111LGtgTtg22AY.4.20.000043
ORF1ab/nsp1111V111LGtgTtg22AY.70.000392
ORF1ab/nsp1111V111LGtgTtg22B.1.1.700.000682
ORF1ab/nsp1111V111LGtgTtg22B.1.36.290.001035
ORF1ab/nsp1111V111LGtgTtg22B.1.4290.000047
ORF1ab/nsp1111V111LGtgTtg22B.1.5260.000047
ORF1ab/nsp1111V111LGtgTtg22B.1.5960.000174
ORF1ab/nsp1111V111LGtgTtg22P.1.140.000096
ORF1ab/nsp1111V111LGtgTtg110.055556
ORF1ab/nsp1111V111LGtgTtg11A.30.002096
ORF1ab/nsp1111V111LGtgTtg11AE.80.000489
ORF1ab/nsp1111V111LGtgTtg11AY.1170.000085
ORF1ab/nsp1111V111LGtgTtg11AY.1180.000063
ORF1ab/nsp1111V111LGtgTtg11AY.450.000122
ORF1ab/nsp1111V111LGtgTtg11AY.540.000095
ORF1ab/nsp1111V111LGtgTtg11AY.550.000917
ORF1ab/nsp1111V111LGtgTtg11AY.680.000274
ORF1ab/nsp1111V111LGtgTtg11AY.750.000056
ORF1ab/nsp1111V111LGtgTtg11AY.970.001701
ORF1ab/nsp1111V111LGtgTtg11AY.980.000079
ORF1ab/nsp1111V111LGtgTtg11AY.99.20.000092
ORF1ab/nsp1111V111LGtgTtg11AZ.30.00152
ORF1ab/nsp1111V111LGtgTtg11B.1.1.1760.000439
ORF1ab/nsp1111V111LGtgTtg11B.1.1.2160.00089
ORF1ab/nsp1111V111LGtgTtg11B.1.1.250.000569
ORF1ab/nsp1111V111LGtgTtg11B.1.1.3060.000438
ORF1ab/nsp1111V111LGtgTtg11B.1.1.370.000193
ORF1ab/nsp1111V111LGtgTtg11B.1.1.5190.00004
ORF1ab/nsp1111V111LGtgCtg11B.1.160.160.000929
ORF1ab/nsp1111V111LGtgCtg11B.1.160.90.007194
ORF1ab/nsp1111V111LGtgTtg11B.1.2580.000067
ORF1ab/nsp1111V111LGtgTtg11B.1.2600.003344
ORF1ab/nsp1111V111LGtgTtg11B.1.30.002618
ORF1ab/nsp1111V111LGtgTtg11B.1.3510.00003
ORF1ab/nsp1111V111LGtgTtg11B.1.36.170.000494
ORF1ab/nsp1111V111LGtgTtg11B.1.36.390.002217
ORF1ab/nsp1111V111LGtgTtg11B.1.4520.013699
ORF1ab/nsp1111V111LGtgTtg11B.1.4800.002488
ORF1ab/nsp1111V111LGtgTtg11B.1.5640.000426
ORF1ab/nsp1111V111LGtgTtg11B.1.5820.000491
ORF1ab/nsp1111V111LGtgCtg11C.36.30.000567