CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = T170N

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1170T170NT170NnonsynaCcaAc2562561773-775

Details of the mutation T170N within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1170T170NaCcaAc256256All0.000049
ORF1ab/nsp1170T170NaCcaAc131131B.1.6320.879195
ORF1ab/nsp1170T170NaCcaAc2929AY.200.001127
ORF1ab/nsp1170T170NaCcaAc2424AY.40.000037
ORF1ab/nsp1170T170NaCcaAc1010AY.90.000676
ORF1ab/nsp1170T170NaCcaAc88B.10.000073
ORF1ab/nsp1170T170NaCcaAc88B.1.1770.000105
ORF1ab/nsp1170T170NaCcaAc77AY.1060.002344
ORF1ab/nsp1170T170NaCcaAc77B.1.2580.000466
ORF1ab/nsp1170T170NaCcaAc44AY.30.00004
ORF1ab/nsp1170T170NaCcaAc44B.1.1.70.000004
ORF1ab/nsp1170T170NaCcaAc33B.1.617.20.000011
ORF1ab/nsp1170T170NaCcaAc22AY.1200.000074
ORF1ab/nsp1170T170NaCcaAc22AY.250.000012
ORF1ab/nsp1170T170NaCcaAc22AY.440.000012
ORF1ab/nsp1170T170NaCcaAc22B.1.4270.000101
ORF1ab/nsp1170T170NaCcaAc22B.1.6210.000177
ORF1ab/nsp1170T170NaCcaAc22B.1.6230.001073
ORF1ab/nsp1170T170NaCcaAc11AY.1130.000142
ORF1ab/nsp1170T170NaCcaAc11AY.290.000016
ORF1ab/nsp1170T170NaCcaAc11AY.390.000025
ORF1ab/nsp1170T170NaCcaAc11AY.430.000004
ORF1ab/nsp1170T170NaCcaAc11AZ.10.000867
ORF1ab/nsp1170T170NaCcaAc11B.1.10.000018
ORF1ab/nsp1170T170NaCcaAc11B.1.2060.000816
ORF1ab/nsp1170T170NaCcaAc11B.1.4430.004673
ORF1ab/nsp1170T170NaCcaAc11B.1.5960.000087