CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = T170A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1170T170AT170AnonsynAccGcc92900.978261773-775
ORF1ab/nsp1170T170AT170AnonsynAcCGcT9220.0217391773-775

Details of the mutation T170A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1170T170AAccGcc9092All0.000017
ORF1ab/nsp1170T170AAcCGcT292All0
ORF1ab/nsp1170T170AAccGcc2020AY.40.000031
ORF1ab/nsp1170T170AAccGcc1010B.1.1.70.000009
ORF1ab/nsp1170T170AAccGcc88AY.470.000249
ORF1ab/nsp1170T170AAccGcc77AY.1030.000043
ORF1ab/nsp1170T170AAccGcc66AY.250.000036
ORF1ab/nsp1170T170AAccGcc66AY.390.000148
ORF1ab/nsp1170T170AAccGcc55B.1.20.000044
ORF1ab/nsp1170T170AAccGcc44AY.4.20.000087
ORF1ab/nsp1170T170AAccGcc34B.1.617.20.000011
ORF1ab/nsp1170T170AAcCGcT14B.1.617.20.000004
ORF1ab/nsp1170T170AAccGcc33AY.1020.00008
ORF1ab/nsp1170T170AAccGcc33AY.440.000018
ORF1ab/nsp1170T170AAcCGcT120.055556
ORF1ab/nsp1170T170AAccGcc120.055556
ORF1ab/nsp1170T170AAccGcc22AY.430.000009
ORF1ab/nsp1170T170AAccGcc22B.10.000018
ORF1ab/nsp1170T170AAccGcc11AY.230.00007
ORF1ab/nsp1170T170AAccGcc11AY.290.000016
ORF1ab/nsp1170T170AAccGcc11AY.540.000095
ORF1ab/nsp1170T170AAccGcc11B.1.1.2650.003155
ORF1ab/nsp1170T170AAccGcc11B.1.1770.000013
ORF1ab/nsp1170T170AAccGcc11B.1.177.860.000183
ORF1ab/nsp1170T170AAccGcc11B.1.3800.006623
ORF1ab/nsp1170T170AAccGcc11B.1.5250.000113
ORF1ab/nsp1170T170AAccGcc11B.1.6210.000089
ORF1ab/nsp1170T170AAccGcc11P.10.000016