CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = S3del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13S3del2S3del2delaGCa--331272-274

Details of the mutation S3del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13S3del2aGCa--33All0.000001
ORF1ab/nsp13S3del2aGCa--11AY.40.000002
ORF1ab/nsp13S3del2aGCa--11B.10.000009
ORF1ab/nsp13S3del2aGCa--11B.1.177.580.001332