CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = R24del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp124R24del2R24del2delCGc--c750.714286335-337
ORF1ab/nsp124R24del2R24del2delCGC--T710.142857335-337
ORF1ab/nsp124R24del2R24del2delcGCc--710.142857335-337

Details of the mutation R24del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp124R24del2CGc--c57All0.000001
ORF1ab/nsp124R24del2CGC--T17All0
ORF1ab/nsp124R24del2cGCc--17All0
ORF1ab/nsp124R24del2CGc--c33B.1.1.70.000003
ORF1ab/nsp124R24del2CGC--T11A.10.000282
ORF1ab/nsp124R24del2CGc--c11B.1.1.370.000193
ORF1ab/nsp124R24del2cGCc--11B.1.2580.000067
ORF1ab/nsp124R24del2CGc--c11B.1.3890.001002