CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = R24R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp124R24RR24RsyncgCcgT13310131780.990083335-337
ORF1ab/nsp124R24RR24RsyncgCcgA13310700.0052592335-337
ORF1ab/nsp124R24RR24RsyncgCcgG13310620.00465815335-337

Details of the mutation R24R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp124R24RcgCcgT1317813310All0.00252
ORF1ab/nsp124R24RcgCcgA7013310All0.000013
ORF1ab/nsp124R24RcgCcgG6213310All0.000012
ORF1ab/nsp124R24RcgCcgT30263033B.1.1.70.002709
ORF1ab/nsp124R24RcgCcgG43033B.1.1.70.000004
ORF1ab/nsp124R24RcgCcgA33033B.1.1.70.000003
ORF1ab/nsp124R24RcgCcgT27672770AY.40.004307
ORF1ab/nsp124R24RcgCcgA32770AY.40.000005
ORF1ab/nsp124R24RcgCcgT541547B.1.617.20.002037
ORF1ab/nsp124R24RcgCcgA5547B.1.617.20.000019
ORF1ab/nsp124R24RcgCcgG1547B.1.617.20.000004
ORF1ab/nsp124R24RcgCcgT439450AY.250.002641
ORF1ab/nsp124R24RcgCcgA11450AY.250.000066
ORF1ab/nsp124R24RcgCcgT354354AY.30.003521
ORF1ab/nsp124R24RcgCcgT336339AY.440.002045
ORF1ab/nsp124R24RcgCcgA3339AY.440.000018
ORF1ab/nsp124R24RcgCcgT318335B.10.002913
ORF1ab/nsp124R24RcgCcgG17335B.10.000156
ORF1ab/nsp124R24RcgCcgT277279AY.1030.00172
ORF1ab/nsp124R24RcgCcgA2279AY.1030.000012
ORF1ab/nsp124R24RcgCcgT216217AY.430.000957
ORF1ab/nsp124R24RcgCcgA1217AY.430.000004
ORF1ab/nsp124R24RcgCcgT214214AY.3.10.018245
ORF1ab/nsp124R24RcgCcgT203209B.1.1770.002673
ORF1ab/nsp124R24RcgCcgA6209B.1.1770.000079
ORF1ab/nsp124R24RcgCcgT194195AY.1020.005144
ORF1ab/nsp124R24RcgCcgA1195AY.1020.000027
ORF1ab/nsp124R24RcgCcgT151187B.1.3510.004489
ORF1ab/nsp124R24RcgCcgG35187B.1.3510.00104
ORF1ab/nsp124R24RcgCcgA1187B.1.3510.00003
ORF1ab/nsp124R24RcgCcgT181181B.1.20.001594
ORF1ab/nsp124R24RcgCcgT180180A.23.10.126761
ORF1ab/nsp124R24RcgCcgT164164B.1.177.210.012541
ORF1ab/nsp124R24RcgCcgT149151P.10.002347
ORF1ab/nsp124R24RcgCcgA2151P.10.000032
ORF1ab/nsp124R24RcgCcgT149149AY.4.20.003232
ORF1ab/nsp124R24RcgCcgT131131AY.130.021088
ORF1ab/nsp124R24RcgCcgT130130B.1.258.170.013516
ORF1ab/nsp124R24RcgCcgT116116AY.390.002867
ORF1ab/nsp124R24RcgCcgT114114B.1.10.002068
ORF1ab/nsp124R24RcgCcgT104104B.1.5260.002444
ORF1ab/nsp124R24RcgCcgT9595AY.99.20.008755
ORF1ab/nsp124R24RcgCcgT9292AY.830.158621
ORF1ab/nsp124R24RcgCcgT9090AY.50.001858
ORF1ab/nsp124R24RcgCcgT8484B.1.1.5190.003336
ORF1ab/nsp124R24RcgCcgT7373B.1.4290.001718
ORF1ab/nsp124R24RcgCcgT7070B.1.110.30.050287
ORF1ab/nsp124R24RcgCcgT6262AY.9.20.002277
ORF1ab/nsp124R24RcgCcgT5656AY.1180.003508
ORF1ab/nsp124R24RcgCcgT5353B.1.1600.001653
ORF1ab/nsp124R24RcgCcgT5252AY.920.014938
ORF1ab/nsp124R24RcgCcgT5050AY.46.40.008225
ORF1ab/nsp124R24RcgCcgT4949AY.290.000773
ORF1ab/nsp124R24RcgCcgT4848AY.470.001493
ORF1ab/nsp124R24RcgCcgT4343B.1.2340.005674
ORF1ab/nsp124R24RcgCcgT4242B.1.36.10.047891
ORF1ab/nsp124R24RcgCcgT4141P.1.140.00196
ORF1ab/nsp124R24RcgCcgT4141R.10.00369
ORF1ab/nsp124R24RcgCcgT3838B.1.5250.0043
ORF1ab/nsp124R24RcgCcgT3636AD.20.007883
ORF1ab/nsp124R24RcgCcgT3232AY.230.002232
ORF1ab/nsp124R24RcgCcgT3131AY.1190.001095
ORF1ab/nsp124R24RcgCcgT3030N.100.882353
ORF1ab/nsp124R24RcgCcgA2128P.1.170.003397
ORF1ab/nsp124R24RcgCcgT728P.1.170.001132
ORF1ab/nsp124R24RcgCcgT2727AY.140.002376
ORF1ab/nsp124R24RcgCcgT2727AY.200.001049
ORF1ab/nsp124R24RcgCcgT2727B.1.4270.001363
ORF1ab/nsp124R24RcgCcgT2626B.1.2580.00173
ORF1ab/nsp124R24RcgCcgT2425B.1.2210.001705
ORF1ab/nsp124R24RcgCcgG125B.1.2210.000071
ORF1ab/nsp124R24RcgCcgT2424B.1.177.70.003956
ORF1ab/nsp124R24RcgCcgT2323B.1.2430.0016
ORF1ab/nsp124R24RcgCcgT2323B.1.351.20.006959
ORF1ab/nsp124R24RcgCcgT2122AY.330.001402
ORF1ab/nsp124R24RcgCcgA122AY.330.000067
ORF1ab/nsp124R24RcgCcgT2222B.1.5770.01512
ORF1ab/nsp124R24RcgCcgT2021B.1.438.10.002145
ORF1ab/nsp124R24RcgCcgA121B.1.438.10.000107
ORF1ab/nsp124R24RcgCcgT2121P.1.60.040856
ORF1ab/nsp124R24RcgCcgT1919AY.90.001284
ORF1ab/nsp124R24RcgCcgT1919AY.950.01446
ORF1ab/nsp124R24RcgCcgT1919B.1.1.4340.006623
ORF1ab/nsp124R24RcgCcgT1919B.1.3200.023661
ORF1ab/nsp124R24RcgCcgT1919P.20.003546
ORF1ab/nsp124R24RcgCcgT1818AY.1210.002436
ORF1ab/nsp124R24RcgCcgT1818AY.460.001873
ORF1ab/nsp124R24RcgCcgT1818AY.750.001008
ORF1ab/nsp124R24RcgCcgT1717AY.1000.000782
ORF1ab/nsp124R24RcgCcgT1717AY.1200.000632
ORF1ab/nsp124R24RcgCcgT1616AY.1170.001352
ORF1ab/nsp124R24RcgCcgT1616AY.46.60.001155
ORF1ab/nsp124R24RcgCcgT1616B.1.1.2160.014248
ORF1ab/nsp124R24RcgCcgT1616B.1.1.330.006734
ORF1ab/nsp124R24RcgCcgT1616B.1.5960.001394
ORF1ab/nsp124R24RcgCcgT1616W.30.084211
ORF1ab/nsp124R24RcgCcgT1515B.1.2790.007704
ORF1ab/nsp124R24RcgCcgT1515Q.80.002474
ORF1ab/nsp124R24RcgCcgT1414AY.4.2.10.002086
ORF1ab/nsp124R24RcgCcgT1414AY.450.001704
ORF1ab/nsp124R24RcgCcgT1414AY.930.003823
ORF1ab/nsp124R24RcgCcgT1414B.1.1.1760.006151
ORF1ab/nsp124R24RcgCcgT1313B.1.1.390.006626
ORF1ab/nsp124R24RcgCcgT1212AY.1130.001709
ORF1ab/nsp124R24RcgCcgT1212AY.260.00034
ORF1ab/nsp124R24RcgCcgT1212AY.340.001164
ORF1ab/nsp124R24RcgCcgT1212AY.610.001257
ORF1ab/nsp124R24RcgCcgT1212C.370.001393
ORF1ab/nsp124R24RcgCcgT1111AY.10.004353
ORF1ab/nsp124R24RcgCcgT711AY.4.50.000752
ORF1ab/nsp124R24RcgCcgA411AY.4.50.00043
ORF1ab/nsp124R24RcgCcgT1111AY.740.001272
ORF1ab/nsp124R24RcgCcgT1010AY.300.003957
ORF1ab/nsp124R24RcgCcgT1010AY.46.50.001984
ORF1ab/nsp124R24RcgCcgT910B.1.6090.004314
ORF1ab/nsp124R24RcgCcgG110B.1.6090.000479
ORF1ab/nsp124R24RcgCcgT1010B.1.6370.000731
ORF1ab/nsp124R24RcgCcgT99AY.120.002845
ORF1ab/nsp124R24RcgCcgT99AY.360.001334
ORF1ab/nsp124R24RcgCcgT99AY.410.002646
ORF1ab/nsp124R24RcgCcgT99AY.9.10.000754
ORF1ab/nsp124R24RcgCcgT99AY.980.000711
ORF1ab/nsp124R24RcgCcgT99B.1.1.2860.026087
ORF1ab/nsp124R24RcgCcgT99B.1.1.4200.009054
ORF1ab/nsp124R24RcgCcgT99B.1.160.260.021792
ORF1ab/nsp124R24RcgCcgT99B.1.466.20.003521
ORF1ab/nsp124R24RcgCcgT99B.1.5950.002349
ORF1ab/nsp124R24RcgCcgT99B.1.6210.000797
ORF1ab/nsp124R24RcgCcgT99D.20.000675
ORF1ab/nsp124R24RcgCcgT88AY.1160.002294
ORF1ab/nsp124R24RcgCcgT88AY.270.000518
ORF1ab/nsp124R24RcgCcgT88AY.350.001864
ORF1ab/nsp124R24RcgCcgT88AY.39.10.000317
ORF1ab/nsp124R24RcgCcgT88AY.420.000322
ORF1ab/nsp124R24RcgCcgT88B.1.1.2140.000444
ORF1ab/nsp124R24RcgCcgT88B.1.1.2220.001632
ORF1ab/nsp124R24RcgCcgT77A.2.50.003493
ORF1ab/nsp124R24RcgCcgT77AY.520.0057
ORF1ab/nsp124R24RcgCcgT77AY.60.000288
ORF1ab/nsp124R24RcgCcgT77B.1.1.700.002387
ORF1ab/nsp124R24RcgCcgT77B.1.36.290.003621
ORF1ab/nsp124R24RcgCcgT77B.1.5700.020588
ORF1ab/nsp124R24RcgCcgT66B.1.1.2770.004552
ORF1ab/nsp124R24RcgCcgT66B.1.1.280.001867
ORF1ab/nsp124R24RcgCcgT66B.1.1.2840.000644
ORF1ab/nsp124R24RcgCcgT66B.1.1.80.021505
ORF1ab/nsp124R24RcgCcgT66B.1.177.600.001311
ORF1ab/nsp124R24RcgCcgT66B.1.5650.004862
ORF1ab/nsp124R24RcgCcgT66B.1.5750.00182
ORF1ab/nsp124R24RcgCcgT66B.1.617.10.000774
ORF1ab/nsp124R24RcgCcgT66Q.10.000758
ORF1ab/nsp124R24RcgCcgT55AY.120.10.001605
ORF1ab/nsp124R24RcgCcgT55AY.370.00158
ORF1ab/nsp124R24RcgCcgT55AY.840.002187
ORF1ab/nsp124R24RcgCcgT55AY.960.010373
ORF1ab/nsp124R24RcgCcgT55AY.98.10.000242
ORF1ab/nsp124R24RcgCcgT55B0.000639
ORF1ab/nsp124R24RcgCcgT55B.1.1.1700.006234
ORF1ab/nsp124R24RcgCcgT55B.1.1.1980.007342
ORF1ab/nsp124R24RcgCcgT55B.1.1.3480.003981
ORF1ab/nsp124R24RcgCcgT55B.1.1.3620.02809
ORF1ab/nsp124R24RcgCcgT55B.1.1.370.000964
ORF1ab/nsp124R24RcgCcgT55B.1.1.3970.011261
ORF1ab/nsp124R24RcgCcgT55B.1.177.190.007153
ORF1ab/nsp124R24RcgCcgT55B.1.177.80.003762
ORF1ab/nsp124R24RcgCcgT55B.1.3890.00501
ORF1ab/nsp124R24RcgCcgT55B.1.5640.002129
ORF1ab/nsp124R24RcgCcgT55C.230.02907
ORF1ab/nsp124R24RcgCcgT55P.30.007974
ORF1ab/nsp124R24RcgCcgT44A.2.20.006757
ORF1ab/nsp124R24RcgCcgT44AY.160.001519
ORF1ab/nsp124R24RcgCcgT44AY.5.40.001107
ORF1ab/nsp124R24RcgCcgT44AY.620.001743
ORF1ab/nsp124R24RcgCcgT44AY.690.000747
ORF1ab/nsp124R24RcgCcgT44AY.75.10.000721
ORF1ab/nsp124R24RcgCcgT44B.1.1.3180.001207
ORF1ab/nsp124R24RcgCcgT44B.1.1.4290.018433
ORF1ab/nsp124R24RcgCcgT44B.1.214.20.002398
ORF1ab/nsp124R24RcgCcgT44B.1.2180.020619
ORF1ab/nsp124R24RcgCcgT44B.1.2370.0199
ORF1ab/nsp124R24RcgCcgT44B.1.360.000584
ORF1ab/nsp124R24RcgCcgT44B.1.3970.019417
ORF1ab/nsp124R24RcgCcgT44B.1.4660.093023
ORF1ab/nsp124R24RcgCcgT44B.1.4990.004202
ORF1ab/nsp124R24RcgCcgT44B.1.6250.009412
ORF1ab/nsp124R24RcgCcgT44P.1.70.001277
ORF1ab/nsp124R24RcgCcgG230.111111
ORF1ab/nsp124R24RcgCcgA130.055556
ORF1ab/nsp124R24RcgCcgT33A.280.007937
ORF1ab/nsp124R24RcgCcgT33AY.1080.003308
ORF1ab/nsp124R24RcgCcgT33AY.1100.000338
ORF1ab/nsp124R24RcgCcgT33AY.116.10.000934
ORF1ab/nsp124R24RcgCcgT33AY.4.30.002525
ORF1ab/nsp124R24RcgCcgT33AY.530.000863
ORF1ab/nsp124R24RcgCcgT33AY.590.001589
ORF1ab/nsp124R24RcgCcgA23AY.770.002255
ORF1ab/nsp124R24RcgCcgT13AY.770.001127
ORF1ab/nsp124R24RcgCcgT33AY.860.00249
ORF1ab/nsp124R24RcgCcgT33B.1.1.10.00098
ORF1ab/nsp124R24RcgCcgT33B.1.1.2940.003797
ORF1ab/nsp124R24RcgCcgT33B.1.1.3060.001315
ORF1ab/nsp124R24RcgCcgT33B.1.1.4400.035294
ORF1ab/nsp124R24RcgCcgT33B.1.1.630.001157
ORF1ab/nsp124R24RcgCcgT33B.1.3110.000824
ORF1ab/nsp124R24RcgCcgT33B.1.3250.02069
ORF1ab/nsp124R24RcgCcgT33B.1.351.30.002629
ORF1ab/nsp124R24RcgCcgT33B.1.351.50.001799
ORF1ab/nsp124R24RcgCcgT33B.1.36.180.001261
ORF1ab/nsp124R24RcgCcgT33B.1.3690.000856
ORF1ab/nsp124R24RcgCcgT33B.1.4590.012245
ORF1ab/nsp124R24RcgCcgT33B.1.5910.031915
ORF1ab/nsp124R24RcgCcgT33B.1.621.10.001517
ORF1ab/nsp124R24RcgCcgT33N.30.017442
ORF1ab/nsp124R24RcgCcgT23P.1.120.000968
ORF1ab/nsp124R24RcgCcgA13P.1.120.000484
ORF1ab/nsp124R24RcgCcgT22A.30.004193
ORF1ab/nsp124R24RcgCcgT22AY.1050.001286
ORF1ab/nsp124R24RcgCcgT22AY.1110.000366
ORF1ab/nsp124R24RcgCcgT22AY.16.10.00094
ORF1ab/nsp124R24RcgCcgT22AY.20.000712
ORF1ab/nsp124R24RcgCcgT22AY.320.001065
ORF1ab/nsp124R24RcgCcgT22AY.380.000999
ORF1ab/nsp124R24RcgCcgT22AY.4.40.000818
ORF1ab/nsp124R24RcgCcgT22AY.46.30.001867
ORF1ab/nsp124R24RcgCcgT22AY.510.001818
ORF1ab/nsp124R24RcgCcgT22AY.540.000191
ORF1ab/nsp124R24RcgCcgT22AY.560.00321
ORF1ab/nsp124R24RcgCcgT12AY.70.000196
ORF1ab/nsp124R24RcgCcgG12AY.70.000196
ORF1ab/nsp124R24RcgCcgT22AY.850.000854
ORF1ab/nsp124R24RcgCcgT22B.1.1.1590.009346
ORF1ab/nsp124R24RcgCcgT22B.1.1.1740.006757
ORF1ab/nsp124R24RcgCcgT22B.1.1.2070.002364
ORF1ab/nsp124R24RcgCcgT22B.1.1.2310.006192
ORF1ab/nsp124R24RcgCcgT22B.1.1.3110.000716
ORF1ab/nsp124R24RcgCcgT22B.1.1.3260.003521
ORF1ab/nsp124R24RcgCcgT22B.1.1.4160.00181
ORF1ab/nsp124R24RcgCcgT22B.1.1.4310.032258
ORF1ab/nsp124R24RcgCcgT22B.1.1.5170.013605
ORF1ab/nsp124R24RcgCcgT22B.1.110.10.2
ORF1ab/nsp124R24RcgCcgT22B.1.177.100.001756
ORF1ab/nsp124R24RcgCcgT22B.1.177.450.000762
ORF1ab/nsp124R24RcgCcgT22B.1.177.860.000367
ORF1ab/nsp124R24RcgCcgT22B.1.1890.008584
ORF1ab/nsp124R24RcgCcgT22B.1.1950.01005
ORF1ab/nsp124R24RcgCcgT22B.1.2130.029851
ORF1ab/nsp124R24RcgCcgT22B.1.2220.003384
ORF1ab/nsp124R24RcgCcgT22B.1.2320.001075
ORF1ab/nsp124R24RcgCcgT22B.1.2410.001623
ORF1ab/nsp124R24RcgCcgT22B.1.258.200.031746
ORF1ab/nsp124R24RcgCcgT22B.1.258.220.005333
ORF1ab/nsp124R24RcgCcgT22B.1.2600.006689
ORF1ab/nsp124R24RcgCcgT22B.1.36.220.002415
ORF1ab/nsp124R24RcgCcgT22B.1.36.390.004435
ORF1ab/nsp124R24RcgCcgT22B.1.36.80.002
ORF1ab/nsp124R24RcgCcgT22B.1.3910.002255
ORF1ab/nsp124R24RcgCcgT22B.1.4000.000858
ORF1ab/nsp124R24RcgCcgT22B.1.4160.002538
ORF1ab/nsp124R24RcgCcgT22B.1.4360.002058
ORF1ab/nsp124R24RcgCcgT22B.1.4530.006472
ORF1ab/nsp124R24RcgCcgT22B.1.564.10.003155
ORF1ab/nsp124R24RcgCcgT22B.1.5820.000981
ORF1ab/nsp124R24RcgCcgT22B.1.5870.003795
ORF1ab/nsp124R24RcgCcgT22B.1.595.10.011696
ORF1ab/nsp124R24RcgCcgT22B.1.617.30.00597
ORF1ab/nsp124R24RcgCcgT22B.1.6230.001073
ORF1ab/nsp124R24RcgCcgT22C.10.004785
ORF1ab/nsp124R24RcgCcgT22L.30.007092
ORF1ab/nsp124R24RcgCcgT22N.50.003534
ORF1ab/nsp124R24RcgCcgT22W.40.002703
ORF1ab/nsp124R24RcgCcgT11A0.000387
ORF1ab/nsp124R24RcgCcgT11A.20.000662
ORF1ab/nsp124R24RcgCcgT11A.2.5.20.001572
ORF1ab/nsp124R24RcgCcgT11A.50.001923
ORF1ab/nsp124R24RcgCcgT11AU.30.00211
ORF1ab/nsp124R24RcgCcgT11AY.1070.000466
ORF1ab/nsp124R24RcgCcgT11AY.1140.000231
ORF1ab/nsp124R24RcgCcgA11AY.120.20.001285
ORF1ab/nsp124R24RcgCcgT11AY.23.10.000417
ORF1ab/nsp124R24RcgCcgT11AY.240.000431
ORF1ab/nsp124R24RcgCcgT11AY.29.10.000221
ORF1ab/nsp124R24RcgCcgT11AY.5.30.000337
ORF1ab/nsp124R24RcgCcgT11AY.550.000917
ORF1ab/nsp124R24RcgCcgT11AY.570.000656
ORF1ab/nsp124R24RcgCcgT11AY.680.000274
ORF1ab/nsp124R24RcgCcgT11AY.7.10.000113
ORF1ab/nsp124R24RcgCcgT11AY.7.20.000559
ORF1ab/nsp124R24RcgCcgT11AY.700.000209
ORF1ab/nsp124R24RcgCcgT11AY.720.001361
ORF1ab/nsp124R24RcgCcgT11AY.790.001211
ORF1ab/nsp124R24RcgCcgT11AY.870.000833
ORF1ab/nsp124R24RcgCcgT11AY.970.001701
ORF1ab/nsp124R24RcgCcgT11AZ.30.00152
ORF1ab/nsp124R24RcgCcgT11B.1.1.1290.009174
ORF1ab/nsp124R24RcgCcgT11B.1.1.1580.012195
ORF1ab/nsp124R24RcgCcgT11B.1.1.1710.003676
ORF1ab/nsp124R24RcgCcgT11B.1.1.2170.003636
ORF1ab/nsp124R24RcgCcgT11B.1.1.2180.007692
ORF1ab/nsp124R24RcgCcgT11B.1.1.2410.00207
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ORF1ab/nsp124R24RcgCcgT11C.1.20.004255
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ORF1ab/nsp124R24RcgCcgT11C.350.000774
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ORF1ab/nsp124R24RcgCcgT11C.37.10.002618
ORF1ab/nsp124R24RcgCcgT11C.380.008065
ORF1ab/nsp124R24RcgCcgT11C.40.01
ORF1ab/nsp124R24RcgCcgT11N.90.005952
ORF1ab/nsp124R24RcgCcgT11P.1.10.000318
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ORF1ab/nsp124R24RcgCcgT11P.1.20.001156
ORF1ab/nsp124R24RcgCcgT11Q.30.000145