CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = R24L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp124R24LR24LnonsyncGccTc39370.948718335-337
ORF1ab/nsp124R24LR24LnonsyncGCcTT3920.0512821335-337

Details of the mutation R24L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp124R24LcGccTc3739All0.000007
ORF1ab/nsp124R24LcGCcTT239All0
ORF1ab/nsp124R24LcGccTc1919AY.40.00003
ORF1ab/nsp124R24LcGccTc12B.10.000009
ORF1ab/nsp124R24LcGCcTT12B.10.000009
ORF1ab/nsp124R24LcGccTc22B.1.10.000036
ORF1ab/nsp124R24LcGccTc22B.1.1.70.000002
ORF1ab/nsp124R24LcGccTc22B.1.617.20.000008
ORF1ab/nsp124R24LcGccTc11AY.1170.000085
ORF1ab/nsp124R24LcGccTc11AY.230.00007
ORF1ab/nsp124R24LcGccTc11AY.46.40.000165
ORF1ab/nsp124R24LcGccTc11B.1.1.4340.000349
ORF1ab/nsp124R24LcGccTc11B.1.177.600.000218
ORF1ab/nsp124R24LcGccTc11B.1.20.000009
ORF1ab/nsp124R24LcGccTc11B.1.2210.000071
ORF1ab/nsp124R24LcGCcTT11B.1.5380.008065
ORF1ab/nsp124R24LcGccTc11B.1.5960.000087
ORF1ab/nsp124R24LcGccTc11B.1.617.10.000129
ORF1ab/nsp124R24LcGccTc11B.1.930.000934
ORF1ab/nsp124R24LcGccTc11P.10.000016