CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = R175del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1175R175delR175deldelCGT---82821788-790

Details of the mutation R175del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1175R175delCGT---8282All0.000016
ORF1ab/nsp1175R175delCGT---2121AY.30.000209
ORF1ab/nsp1175R175delCGT---1111B.1.1.70.00001
ORF1ab/nsp1175R175delCGT---66AY.40.000009
ORF1ab/nsp1175R175delCGT---55B.1.1.330.002104
ORF1ab/nsp1175R175delCGT---44B.1.1.3480.003185
ORF1ab/nsp1175R175delCGT---33AY.600.002814
ORF1ab/nsp1175R175delCGT---33B.10.000027
ORF1ab/nsp1175R175delCGT---33B.1.1770.00004
ORF1ab/nsp1175R175delCGT---22AY.1030.000012
ORF1ab/nsp1175R175delCGT---22AY.4.50.000215
ORF1ab/nsp1175R175delCGT---22N.40.008511
ORF1ab/nsp1175R175delCGT---22N.60.014184
ORF1ab/nsp1175R175delCGT---22P.20.000373
ORF1ab/nsp1175R175delCGT---11A.2.20.001689
ORF1ab/nsp1175R175delCGT---11AY.1190.000035
ORF1ab/nsp1175R175delCGT---11AY.250.000006
ORF1ab/nsp1175R175delCGT---11AY.430.000004
ORF1ab/nsp1175R175delCGT---11AY.9.20.000037
ORF1ab/nsp1175R175delCGT---11B.1.10.000018
ORF1ab/nsp1175R175delCGT---11B.1.1.2320.001815
ORF1ab/nsp1175R175delCGT---11B.1.20.000009
ORF1ab/nsp1175R175delCGT---11B.1.2430.00007
ORF1ab/nsp1175R175delCGT---11B.1.360.000146
ORF1ab/nsp1175R175delCGT---11B.1.4090.000781
ORF1ab/nsp1175R175delCGT---11B.1.4270.00005
ORF1ab/nsp1175R175delCGT---11B.1.4290.000024
ORF1ab/nsp1175R175delCGT---11B.1.617.20.000004
ORF1ab/nsp1175R175delCGT---11B.1.6380.052632
ORF1ab/nsp1175R175delCGT---11C.350.000774