CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = R175L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1175R175LR175LnonsyncGtcTt64641788-790

Details of the mutation R175L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1175R175LcGtcTt6464All0.000012
ORF1ab/nsp1175R175LcGtcTt1212B.1.1.70.000011
ORF1ab/nsp1175R175LcGtcTt1111AY.40.000017
ORF1ab/nsp1175R175LcGtcTt77AY.30.00007
ORF1ab/nsp1175R175LcGtcTt55AY.430.000022
ORF1ab/nsp1175R175LcGtcTt44AY.250.000024
ORF1ab/nsp1175R175LcGtcTt33AY.440.000018
ORF1ab/nsp1175R175LcGtcTt33AY.580.002722
ORF1ab/nsp1175R175LcGtcTt22D.20.00015
ORF1ab/nsp1175R175LcGtcTt11AY.1020.000027
ORF1ab/nsp1175R175LcGtcTt11AY.1110.000183
ORF1ab/nsp1175R175LcGtcTt11AY.1200.000037
ORF1ab/nsp1175R175LcGtcTt11AY.1210.000135
ORF1ab/nsp1175R175LcGtcTt11AY.20.000356
ORF1ab/nsp1175R175LcGtcTt11AY.390.000025
ORF1ab/nsp1175R175LcGtcTt11AY.4.50.000107
ORF1ab/nsp1175R175LcGtcTt11AY.420.00004
ORF1ab/nsp1175R175LcGtcTt11AY.50.000021
ORF1ab/nsp1175R175LcGtcTt11B.10.000009
ORF1ab/nsp1175R175LcGtcTt11B.1.10.000018
ORF1ab/nsp1175R175LcGtcTt11B.1.1770.000013
ORF1ab/nsp1175R175LcGtcTt11B.1.177.230.003236
ORF1ab/nsp1175R175LcGtcTt11B.1.20.000009
ORF1ab/nsp1175R175LcGtcTt11B.1.4290.000024
ORF1ab/nsp1175R175LcGtcTt11B.1.5960.000087
ORF1ab/nsp1175R175LcGtcTt11Q.10.000126