CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = P80P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp180P80PP80PsynccTccC12219270.759214503-505
ORF1ab/nsp180P80PP80PsynccTccA12211470.120393503-505
ORF1ab/nsp180P80PP80PsynccTccG12211470.120393503-505

Details of the mutation P80P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp180P80PccTccC9271221All0.000177
ORF1ab/nsp180P80PccTccG1471221All0.000028
ORF1ab/nsp180P80PccTccA1471221All0.000028
ORF1ab/nsp180P80PccTccC525525B.1.1.1980.770925
ORF1ab/nsp180P80PccTccA56130B.1.1.70.00005
ORF1ab/nsp180P80PccTccG48130B.1.1.70.000043
ORF1ab/nsp180P80PccTccC26130B.1.1.70.000023
ORF1ab/nsp180P80PccTccC104125B.1.617.20.000392
ORF1ab/nsp180P80PccTccG11125B.1.617.20.000041
ORF1ab/nsp180P80PccTccA10125B.1.617.20.000038
ORF1ab/nsp180P80PccTccC6066AY.430.000266
ORF1ab/nsp180P80PccTccG566AY.430.000022
ORF1ab/nsp180P80PccTccA166AY.430.000004
ORF1ab/nsp180P80PccTccC6165B.1.20.000537
ORF1ab/nsp180P80PccTccG365B.1.20.000026
ORF1ab/nsp180P80PccTccA165B.1.20.000009
ORF1ab/nsp180P80PccTccA3854AZ.20.031199
ORF1ab/nsp180P80PccTccG1654AZ.20.013136
ORF1ab/nsp180P80PccTccC3140AY.440.000189
ORF1ab/nsp180P80PccTccG740AY.440.000043
ORF1ab/nsp180P80PccTccA240AY.440.000012
ORF1ab/nsp180P80PccTccG1921C.370.002205
ORF1ab/nsp180P80PccTccC221C.370.000232
ORF1ab/nsp180P80PccTccA1111B.1.5990.040146
ORF1ab/nsp180P80PccTccC99B.1.4780.105882
ORF1ab/nsp180P80PccTccC68AY.40.000009
ORF1ab/nsp180P80PccTccG18AY.40.000002
ORF1ab/nsp180P80PccTccA18AY.40.000002
ORF1ab/nsp180P80PccTccC88AY.50.000165
ORF1ab/nsp180P80PccTccC88B.1.4290.000188
ORF1ab/nsp180P80PccTccC77AY.230.000488
ORF1ab/nsp180P80PccTccC57AY.30.00005
ORF1ab/nsp180P80PccTccA17AY.30.00001
ORF1ab/nsp180P80PccTccG17AY.30.00001
ORF1ab/nsp180P80PccTccG77Q.10.000884
ORF1ab/nsp180P80PccTccC66AY.390.000148
ORF1ab/nsp180P80PccTccC56AY.9.10.000419
ORF1ab/nsp180P80PccTccG16AY.9.10.000084
ORF1ab/nsp180P80PccTccC45AY.250.000024
ORF1ab/nsp180P80PccTccA15AY.250.000006
ORF1ab/nsp180P80PccTccC25P.10.000032
ORF1ab/nsp180P80PccTccA25P.10.000032
ORF1ab/nsp180P80PccTccG15P.10.000016
ORF1ab/nsp180P80PccTccA24AY.1030.000012
ORF1ab/nsp180P80PccTccG14AY.1030.000006
ORF1ab/nsp180P80PccTccC14AY.1030.000006
ORF1ab/nsp180P80PccTccC44AY.120.10.001284
ORF1ab/nsp180P80PccTccC34AY.75.10.000541
ORF1ab/nsp180P80PccTccG14AY.75.10.00018
ORF1ab/nsp180P80PccTccC24B.1.1.2140.000111
ORF1ab/nsp180P80PccTccA24B.1.1.2140.000111
ORF1ab/nsp180P80PccTccC34B.1.2580.0002
ORF1ab/nsp180P80PccTccA14B.1.2580.000067
ORF1ab/nsp180P80PccTccC44B.1.258.60.078431
ORF1ab/nsp180P80PccTccG44B.1.6370.000292
ORF1ab/nsp180P80PccTccA44C.36.30.002269
ORF1ab/nsp180P80PccTccA24Q.40.00091
ORF1ab/nsp180P80PccTccG24Q.40.00091
ORF1ab/nsp180P80PccTccA44R.10.00036
ORF1ab/nsp180P80PccTccC23AY.1020.000053
ORF1ab/nsp180P80PccTccA13AY.1020.000027
ORF1ab/nsp180P80PccTccC23AY.1190.000071
ORF1ab/nsp180P80PccTccG13AY.1190.000035
ORF1ab/nsp180P80PccTccC23B.10.000018
ORF1ab/nsp180P80PccTccA13B.10.000009
ORF1ab/nsp180P80PccTccG13B.1.10.000018
ORF1ab/nsp180P80PccTccA13B.1.10.000018
ORF1ab/nsp180P80PccTccC13B.1.10.000018
ORF1ab/nsp180P80PccTccG22AY.1200.000074
ORF1ab/nsp180P80PccTccC22AY.190.002281
ORF1ab/nsp180P80PccTccG12AY.290.000016
ORF1ab/nsp180P80PccTccC12AY.290.000016
ORF1ab/nsp180P80PccTccC22AY.340.000194
ORF1ab/nsp180P80PccTccG22AY.34.10.00102
ORF1ab/nsp180P80PccTccC22AY.4.20.000043
ORF1ab/nsp180P80PccTccC22AY.460.000208
ORF1ab/nsp180P80PccTccC12AY.46.20.000635
ORF1ab/nsp180P80PccTccG12AY.46.20.000635
ORF1ab/nsp180P80PccTccC22AY.540.000191
ORF1ab/nsp180P80PccTccC22B.1.1600.000062
ORF1ab/nsp180P80PccTccC110.055556
ORF1ab/nsp180P80PccTccG11AY.1110.000183
ORF1ab/nsp180P80PccTccC11AY.1170.000085
ORF1ab/nsp180P80PccTccC11AY.120.000316
ORF1ab/nsp180P80PccTccA11AY.130.000161
ORF1ab/nsp180P80PccTccC11AY.260.000028
ORF1ab/nsp180P80PccTccC11AY.3.10.000085
ORF1ab/nsp180P80PccTccC11AY.46.40.000165
ORF1ab/nsp180P80PccTccC11AY.46.60.000072
ORF1ab/nsp180P80PccTccC11AY.600.000938
ORF1ab/nsp180P80PccTccC11AY.910.00073
ORF1ab/nsp180P80PccTccC11AY.980.000079
ORF1ab/nsp180P80PccTccC11AY.98.10.000048
ORF1ab/nsp180P80PccTccC11B.1.1.1860.003436
ORF1ab/nsp180P80PccTccC11B.1.1.2940.001266
ORF1ab/nsp180P80PccTccG11B.1.1.3180.000302
ORF1ab/nsp180P80PccTccG11B.1.1.5230.001563
ORF1ab/nsp180P80PccTccC11B.1.1.700.000341
ORF1ab/nsp180P80PccTccG11B.1.1.830.00271
ORF1ab/nsp180P80PccTccC11B.1.160.160.000929
ORF1ab/nsp180P80PccTccG11B.1.1770.000013
ORF1ab/nsp180P80PccTccA11B.1.177.440.000519
ORF1ab/nsp180P80PccTccA11B.1.177.600.000218
ORF1ab/nsp180P80PccTccG11B.1.2060.000816
ORF1ab/nsp180P80PccTccC11B.1.2430.00007
ORF1ab/nsp180P80PccTccC11B.1.3490.000715
ORF1ab/nsp180P80PccTccG11B.1.3510.00003
ORF1ab/nsp180P80PccTccC11B.1.351.30.000876
ORF1ab/nsp180P80PccTccG11B.1.360.000146
ORF1ab/nsp180P80PccTccG11B.1.4590.004082
ORF1ab/nsp180P80PccTccG11B.1.4680.005714
ORF1ab/nsp180P80PccTccG11B.1.5250.000113
ORF1ab/nsp180P80PccTccC11B.1.5400.009709
ORF1ab/nsp180P80PccTccC11B.1.5960.000087
ORF1ab/nsp180P80PccTccA11P.1.160.000374
ORF1ab/nsp180P80PccTccA11P.1.170.000162