CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = P109S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1109P109SP109SnonsynCctTct4224221590-592

Details of the mutation P109S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1109P109SCctTct422422All0.000081
ORF1ab/nsp1109P109SCctTct206206AY.40.000321
ORF1ab/nsp1109P109SCctTct1818B.1.1.70.000016
ORF1ab/nsp1109P109SCctTct1818B.1.4970.005666
ORF1ab/nsp1109P109SCctTct1616AY.50.00033
ORF1ab/nsp1109P109SCctTct1515B.1.6210.001328
ORF1ab/nsp1109P109SCctTct1414AY.440.000085
ORF1ab/nsp1109P109SCctTct1212AY.30.000119
ORF1ab/nsp1109P109SCctTct1010AY.430.000044
ORF1ab/nsp1109P109SCctTct88B.1.617.20.00003
ORF1ab/nsp1109P109SCctTct77AY.250.000042
ORF1ab/nsp1109P109SCctTct77AY.4.50.000752
ORF1ab/nsp1109P109SCctTct77B.1.177.320.009447
ORF1ab/nsp1109P109SCctTct66AY.750.000336
ORF1ab/nsp1109P109SCctTct66B.1.1770.000079
ORF1ab/nsp1109P109SCctTct44AY.390.000099
ORF1ab/nsp1109P109SCctTct44B.10.000037
ORF1ab/nsp1109P109SCctTct44B.1.10.000073
ORF1ab/nsp1109P109SCctTct33AY.460.000312
ORF1ab/nsp1109P109SCctTct33B.1.177.520.005272
ORF1ab/nsp1109P109SCctTct33B.1.177.720.010169
ORF1ab/nsp1109P109SCctTct33B.1.4430.014019
ORF1ab/nsp1109P109SCctTct22AY.1020.000053
ORF1ab/nsp1109P109SCctTct22AY.1030.000012
ORF1ab/nsp1109P109SCctTct22AY.7.10.000225
ORF1ab/nsp1109P109SCctTct22AY.9.10.000167
ORF1ab/nsp1109P109SCctTct22B.1.177.850.01087
ORF1ab/nsp1109P109SCctTct22B.1.20.000018
ORF1ab/nsp1109P109SCctTct22B.1.3510.000059
ORF1ab/nsp1109P109SCctTct22B.1.3670.001585
ORF1ab/nsp1109P109SCctTct22P.1.170.000324
ORF1ab/nsp1109P109SCctTct11AY.1050.000643
ORF1ab/nsp1109P109SCctTct11AY.1170.000085
ORF1ab/nsp1109P109SCctTct11AY.200.000039
ORF1ab/nsp1109P109SCctTct11AY.240.000431
ORF1ab/nsp1109P109SCctTct11AY.290.000016
ORF1ab/nsp1109P109SCctTct11AY.330.000067
ORF1ab/nsp1109P109SCctTct11AY.340.000097
ORF1ab/nsp1109P109SCctTct11AY.410.000294
ORF1ab/nsp1109P109SCctTct11AY.420.00004
ORF1ab/nsp1109P109SCctTct11AY.5.30.000337
ORF1ab/nsp1109P109SCctTct11AY.70.000196
ORF1ab/nsp1109P109SCctTct11B.1.1.1700.001247
ORF1ab/nsp1109P109SCctTct11B.1.1.1980.001468
ORF1ab/nsp1109P109SCctTct11B.1.1.2980.000862
ORF1ab/nsp1109P109SCctTct11B.1.1.500.000679
ORF1ab/nsp1109P109SCctTct11B.1.1.5190.00004
ORF1ab/nsp1109P109SCctTct11B.1.1600.000031
ORF1ab/nsp1109P109SCctTct11B.1.160.160.000929
ORF1ab/nsp1109P109SCctTct11B.1.177.120.000152
ORF1ab/nsp1109P109SCctTct11B.1.177.330.001645
ORF1ab/nsp1109P109SCctTct11B.1.177.440.000519
ORF1ab/nsp1109P109SCctTct11B.1.2060.000816
ORF1ab/nsp1109P109SCctTct11B.1.2580.000067
ORF1ab/nsp1109P109SCctTct11B.1.3400.004292
ORF1ab/nsp1109P109SCctTct11B.1.4110.003704
ORF1ab/nsp1109P109SCctTct11B.1.5820.000491
ORF1ab/nsp1109P109SCctTct11B.600.015873
ORF1ab/nsp1109P109SCctTct11P.10.000016
ORF1ab/nsp1109P109SCctTct11P.1.120.000484
ORF1ab/nsp1109P109SCctTct11R.10.00009