CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = P109H

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1109P109HP109HnonsyncCtcAt2122121590-592

Details of the mutation P109H within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1109P109HcCtcAt212212All0.000041
ORF1ab/nsp1109P109HcCtcAt180180AY.40.00028
ORF1ab/nsp1109P109HcCtcAt88AY.470.000249
ORF1ab/nsp1109P109HcCtcAt44B.1.1770.000053
ORF1ab/nsp1109P109HcCtcAt22AY.440.000012
ORF1ab/nsp1109P109HcCtcAt22B.10.000018
ORF1ab/nsp1109P109HcCtcAt22B.1.20.000018
ORF1ab/nsp1109P109HcCtcAt11AY.1030.000006
ORF1ab/nsp1109P109HcCtcAt11AY.1140.000231
ORF1ab/nsp1109P109HcCtcAt11AY.160.00038
ORF1ab/nsp1109P109HcCtcAt11AY.250.000006
ORF1ab/nsp1109P109HcCtcAt11AY.39.10.00004
ORF1ab/nsp1109P109HcCtcAt11AY.430.000004
ORF1ab/nsp1109P109HcCtcAt11AY.50.000021
ORF1ab/nsp1109P109HcCtcAt11AY.520.000814
ORF1ab/nsp1109P109HcCtcAt11AY.540.000095
ORF1ab/nsp1109P109HcCtcAt11AY.7.10.000113
ORF1ab/nsp1109P109HcCtcAt11AY.900.000684
ORF1ab/nsp1109P109HcCtcAt11B.1.1.700.000341
ORF1ab/nsp1109P109HcCtcAt11B.1.5960.000087
ORF1ab/nsp1109P109HcCtcAt11Q.70.001111