CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = N9S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp19N9SN9SnonsynaAcaGc3663661290-292

Details of the mutation N9S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp19N9SaAcaGc366366All0.00007
ORF1ab/nsp19N9SaAcaGc9595B.1.2210.006748
ORF1ab/nsp19N9SaAcaGc7979B.1.1.70.000071
ORF1ab/nsp19N9SaAcaGc3131B.1.177.370.837838
ORF1ab/nsp19N9SaAcaGc1717AY.1180.001065
ORF1ab/nsp19N9SaAcaGc1414B.1.617.20.000053
ORF1ab/nsp19N9SaAcaGc1313AY.340.001261
ORF1ab/nsp19N9SaAcaGc1313AY.440.000079
ORF1ab/nsp19N9SaAcaGc77AY.40.000011
ORF1ab/nsp19N9SaAcaGc77B.10.000064
ORF1ab/nsp19N9SaAcaGc77B.1.6210.00062
ORF1ab/nsp19N9SaAcaGc77P.1.140.000335
ORF1ab/nsp19N9SaAcaGc66B.1.1770.000079
ORF1ab/nsp19N9SaAcaGc66B.1.3360.014634
ORF1ab/nsp19N9SaAcaGc55AY.430.000022
ORF1ab/nsp19N9SaAcaGc55B.1.2410.004058
ORF1ab/nsp19N9SaAcaGc55P.10.000079
ORF1ab/nsp19N9SaAcaGc44AY.330.000267
ORF1ab/nsp19N9SaAcaGc33AY.1030.000019
ORF1ab/nsp19N9SaAcaGc33AY.250.000018
ORF1ab/nsp19N9SaAcaGc33B.1.20.000026
ORF1ab/nsp19N9SaAcaGc22AY.1020.000053
ORF1ab/nsp19N9SaAcaGc22AY.29.10.000441
ORF1ab/nsp19N9SaAcaGc22AY.9.10.000167
ORF1ab/nsp19N9SaAcaGc22AY.970.003401
ORF1ab/nsp19N9SaAcaGc22B.1.5260.000047
ORF1ab/nsp19N9SaAcaGc22Q.20.001227
ORF1ab/nsp19N9SaAcaGc11AY.1130.000142
ORF1ab/nsp19N9SaAcaGc11AY.1140.000231
ORF1ab/nsp19N9SaAcaGc11AY.1190.000035
ORF1ab/nsp19N9SaAcaGc11AY.230.00007
ORF1ab/nsp19N9SaAcaGc11AY.260.000028
ORF1ab/nsp19N9SaAcaGc11AY.290.000016
ORF1ab/nsp19N9SaAcaGc11AY.390.000025
ORF1ab/nsp19N9SaAcaGc11AY.470.000031
ORF1ab/nsp19N9SaAcaGc11AY.540.000095
ORF1ab/nsp19N9SaAcaGc11AY.590.00053
ORF1ab/nsp19N9SaAcaGc11AY.610.000105
ORF1ab/nsp19N9SaAcaGc11AY.690.000187
ORF1ab/nsp19N9SaAcaGc11AY.800.001129
ORF1ab/nsp19N9SaAcaGc11B.1.1.5190.00004
ORF1ab/nsp19N9SaAcaGc11B.1.1600.000031
ORF1ab/nsp19N9SaAcaGc11B.1.2430.00007
ORF1ab/nsp19N9SaAcaGc11B.1.2580.000067
ORF1ab/nsp19N9SaAcaGc11B.1.258.170.000104
ORF1ab/nsp19N9SaAcaGc11B.1.36.180.00042
ORF1ab/nsp19N9SaAcaGc11B.1.4270.00005
ORF1ab/nsp19N9SaAcaGc11B.1.5170.000427
ORF1ab/nsp19N9SaAcaGc11C.350.000774
ORF1ab/nsp19N9SaAcaGc11D.20.000075
ORF1ab/nsp19N9SaAcaGc11P.1.20.001156