CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = N160S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1160N160SN160SnonsynaAcaGc2182160.990826743-745
ORF1ab/nsp1160N160SN160SnonsynAAcTCc21810.00458716743-745
ORF1ab/nsp1160N160SN160SnonsynAACTCT21810.00458716743-745

Details of the mutation N160S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1160N160SaAcaGc216218All0.000041
ORF1ab/nsp1160N160SAAcTCc1218All0
ORF1ab/nsp1160N160SAACTCT1218All0
ORF1ab/nsp1160N160SaAcaGc105105B.1.1.70.000094
ORF1ab/nsp1160N160SaAcaGc2525P.1.140.001195
ORF1ab/nsp1160N160SaAcaGc1919AY.690.003547
ORF1ab/nsp1160N160SaAcaGc1010AY.450.001217
ORF1ab/nsp1160N160SaAcaGc77AY.250.000042
ORF1ab/nsp1160N160SaAcaGc55AY.29.10.001103
ORF1ab/nsp1160N160SaAcaGc55AY.40.000008
ORF1ab/nsp1160N160SaAcaGc35B.1.617.20.000011
ORF1ab/nsp1160N160SAAcTCc15B.1.617.20.000004
ORF1ab/nsp1160N160SAACTCT15B.1.617.20.000004
ORF1ab/nsp1160N160SaAcaGc44AY.440.000024
ORF1ab/nsp1160N160SaAcaGc44P.10.000063
ORF1ab/nsp1160N160SaAcaGc33AY.30.00003
ORF1ab/nsp1160N160SaAcaGc22AY.1000.000092
ORF1ab/nsp1160N160SaAcaGc22AY.1010.000981
ORF1ab/nsp1160N160SaAcaGc22AY.430.000009
ORF1ab/nsp1160N160SaAcaGc22AY.75.10.000361
ORF1ab/nsp1160N160SaAcaGc22B.10.000018
ORF1ab/nsp1160N160SaAcaGc22Q.80.00033
ORF1ab/nsp1160N160SaAcaGc11AY.1190.000035
ORF1ab/nsp1160N160SaAcaGc11AY.270.000065
ORF1ab/nsp1160N160SaAcaGc11AY.50.000021
ORF1ab/nsp1160N160SaAcaGc11AY.650.000533
ORF1ab/nsp1160N160SaAcaGc11AY.90.000068
ORF1ab/nsp1160N160SaAcaGc11AY.910.00073
ORF1ab/nsp1160N160SaAcaGc11AY.99.20.000092
ORF1ab/nsp1160N160SaAcaGc11B0.000128
ORF1ab/nsp1160N160SaAcaGc11B.1.10.000018
ORF1ab/nsp1160N160SaAcaGc11B.1.1.2220.000204
ORF1ab/nsp1160N160SaAcaGc11B.1.1.630.000386
ORF1ab/nsp1160N160SaAcaGc11B.1.360.000146
ORF1ab/nsp1160N160SaAcaGc11B.1.5900.004545
ORF1ab/nsp1160N160SaAcaGc11B.290.003509