CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = L88R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp188L88RL88RnonsyncTgcGg22221527-529

Details of the mutation L88R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp188L88RcTgcGg2222All0.000004
ORF1ab/nsp188L88RcTgcGg99AY.4.50.000967
ORF1ab/nsp188L88RcTgcGg44AY.40.000006
ORF1ab/nsp188L88RcTgcGg22AY.730.001331
ORF1ab/nsp188L88RcTgcGg11AT.10.005128
ORF1ab/nsp188L88RcTgcGg11AY.1200.000037
ORF1ab/nsp188L88RcTgcGg11AY.50.000021
ORF1ab/nsp188L88RcTgcGg11B.10.000009
ORF1ab/nsp188L88RcTgcGg11B.1.10.000018
ORF1ab/nsp188L88RcTgcGg11B.1.5990.00365
ORF1ab/nsp188L88RcTgcGg11B.1.617.20.000004