CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = L27F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp127L27FL27FnonsynCtcTtc284528390.997891344-346
ORF1ab/nsp127L27FL27FnonsynCtCTtT284560.00210896344-346

Details of the mutation L27F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp127L27FCtcTtc28392845All0.000543
ORF1ab/nsp127L27FCtCTtT62845All0.000001
ORF1ab/nsp127L27FCtcTtc740740B.1.1.70.000662
ORF1ab/nsp127L27FCtcTtc220220AY.40.000342
ORF1ab/nsp127L27FCtcTtc156156AY.1030.000969
ORF1ab/nsp127L27FCtcTtc133133B.1.4970.041863
ORF1ab/nsp127L27FCtcTtc127127B.1.617.20.000478
ORF1ab/nsp127L27FCtcTtc118118AZ.60.991597
ORF1ab/nsp127L27FCtcTtc107107AY.30.001064
ORF1ab/nsp127L27FCtcTtc9898AY.250.000589
ORF1ab/nsp127L27FCtcTtc6565AY.430.000288
ORF1ab/nsp127L27FCtcTtc6363B.1.5580.287671
ORF1ab/nsp127L27FCtcTtc5757AY.50.001177
ORF1ab/nsp127L27FCtcTtc4545B.1.2430.003131
ORF1ab/nsp127L27FCtcTtc4141B.1.20.000361
ORF1ab/nsp127L27FCtcTtc4141P.10.000646
ORF1ab/nsp127L27FCtcTtc3939B.10.000357
ORF1ab/nsp127L27FCtcTtc3737AY.440.000225
ORF1ab/nsp127L27FCtcTtc3636B.1.1770.000474
ORF1ab/nsp127L27FCtcTtc2526B.1.10.000454
ORF1ab/nsp127L27FCtCTtT126B.1.10.000018
ORF1ab/nsp127L27FCtcTtc2323B.1.1600.000717
ORF1ab/nsp127L27FCtcTtc2222B.1.5260.000517
ORF1ab/nsp127L27FCtcTtc2121AY.470.000653
ORF1ab/nsp127L27FCtcTtc1919AY.1020.000504
ORF1ab/nsp127L27FCtcTtc1919P.1.140.000908
ORF1ab/nsp127L27FCtcTtc1818B.1.177.60.017578
ORF1ab/nsp127L27FCtcTtc1818P.1.70.005747
ORF1ab/nsp127L27FCtcTtc1515B.1.5960.001307
ORF1ab/nsp127L27FCtcTtc1212AY.1000.000552
ORF1ab/nsp127L27FCtcTtc1212AY.260.00034
ORF1ab/nsp127L27FCtcTtc1212B.1.4290.000282
ORF1ab/nsp127L27FCtcTtc1111AY.330.000735
ORF1ab/nsp127L27FCtcTtc1111B.1.1.5190.000437
ORF1ab/nsp127L27FCtcTtc1010A.2.50.00499
ORF1ab/nsp127L27FCtcTtc1010B.1.2580.000665
ORF1ab/nsp127L27FCtcTtc99AY.200.00035
ORF1ab/nsp127L27FCtcTtc99AY.390.000222
ORF1ab/nsp127L27FCtcTtc99AY.39.10.000357
ORF1ab/nsp127L27FCtcTtc99B.1.6370.000658
ORF1ab/nsp127L27FCtcTtc88AY.290.000126
ORF1ab/nsp127L27FCtcTtc88AY.4.20.000174
ORF1ab/nsp127L27FCtcTtc88B.1.3510.000238
ORF1ab/nsp127L27FCtcTtc77AY.9.20.000257
ORF1ab/nsp127L27FCtcTtc77B.1.1.1690.127273
ORF1ab/nsp127L27FCtcTtc77B.1.1.2840.000752
ORF1ab/nsp127L27FCtcTtc77B.1.1.370.00135
ORF1ab/nsp127L27FCtcTtc77B.1.110.30.005029
ORF1ab/nsp127L27FCtcTtc77B.1.214.20.004197
ORF1ab/nsp127L27FCtcTtc66AY.46.60.000433
ORF1ab/nsp127L27FCtcTtc66AY.750.000336
ORF1ab/nsp127L27FCtcTtc66B.1.1.630.002315
ORF1ab/nsp127L27FCtcTtc66B.1.4000.002574
ORF1ab/nsp127L27FCtcTtc66B.1.6210.000531
ORF1ab/nsp127L27FCtcTtc66R.10.00054
ORF1ab/nsp127L27FCtcTtc55AY.230.000349
ORF1ab/nsp127L27FCtcTtc55AY.420.000201
ORF1ab/nsp127L27FCtcTtc55B.1.1.2850.03268
ORF1ab/nsp127L27FCtcTtc55B.1.1.3180.001509
ORF1ab/nsp127L27FCtcTtc55B.1.1.3690.002231
ORF1ab/nsp127L27FCtcTtc55B.1.177.540.003032
ORF1ab/nsp127L27FCtcTtc55B.1.177.830.007407
ORF1ab/nsp127L27FCtcTtc55B.1.2340.00066
ORF1ab/nsp127L27FCtcTtc55B.1.3110.001373
ORF1ab/nsp127L27FCtcTtc55B.1.3910.005637
ORF1ab/nsp127L27FCtcTtc55B.1.4250.01497
ORF1ab/nsp127L27FCtcTtc55P.1.130.004492
ORF1ab/nsp127L27FCtcTtc55Q.10.000632
ORF1ab/nsp127L27FCtcTtc44AY.1130.00057
ORF1ab/nsp127L27FCtcTtc44AY.160.001519
ORF1ab/nsp127L27FCtcTtc44AY.3.10.000341
ORF1ab/nsp127L27FCtcTtc44AY.60.000165
ORF1ab/nsp127L27FCtcTtc44B.1.1.3480.003185
ORF1ab/nsp127L27FCtcTtc44B.1.1.4320.005063
ORF1ab/nsp127L27FCtcTtc44B.1.4270.000202
ORF1ab/nsp127L27FCtcTtc44B.60.00364
ORF1ab/nsp127L27FCtcTtc33AY.1180.000188
ORF1ab/nsp127L27FCtcTtc33AY.1190.000106
ORF1ab/nsp127L27FCtcTtc33AY.1200.000112
ORF1ab/nsp127L27FCtcTtc33AY.1210.000406
ORF1ab/nsp127L27FCtcTtc33AY.140.000264
ORF1ab/nsp127L27FCtcTtc33AY.220.006276
ORF1ab/nsp127L27FCtcTtc33AY.350.000699
ORF1ab/nsp127L27FCtcTtc33AY.4.50.000322
ORF1ab/nsp127L27FCtcTtc33AY.450.000365
ORF1ab/nsp127L27FCtcTtc33AY.570.001969
ORF1ab/nsp127L27FCtcTtc33AY.70.000588
ORF1ab/nsp127L27FCtcTtc33AY.90.000203
ORF1ab/nsp127L27FCtcTtc23B.1.1.3170.000823
ORF1ab/nsp127L27FCtCTtT13B.1.1.3170.000412
ORF1ab/nsp127L27FCtcTtc33B.1.177.100.002634
ORF1ab/nsp127L27FCtcTtc33B.1.2350.007557
ORF1ab/nsp127L27FCtcTtc33B.1.36.180.001261
ORF1ab/nsp127L27FCtcTtc33B.1.5650.002431
ORF1ab/nsp127L27FCtcTtc33B.1.5750.00091
ORF1ab/nsp127L27FCtcTtc33B.1.6250.007059
ORF1ab/nsp127L27FCtcTtc33B.1.6280.001057
ORF1ab/nsp127L27FCtcTtc33B.400.001093
ORF1ab/nsp127L27FCtcTtc33C.370.000348
ORF1ab/nsp127L27FCtcTtc33D.20.000225
ORF1ab/nsp127L27FCtCTtT33P.1.17.10.002625
ORF1ab/nsp127L27FCtcTtc22A.210.00554
ORF1ab/nsp127L27FCtcTtc22AY.110.002677
ORF1ab/nsp127L27FCtcTtc22AY.1110.000366
ORF1ab/nsp127L27FCtcTtc22AY.1160.000574
ORF1ab/nsp127L27FCtcTtc22AY.1170.000169
ORF1ab/nsp127L27FCtcTtc22AY.270.000129
ORF1ab/nsp127L27FCtcTtc22AY.300.000791
ORF1ab/nsp127L27FCtcTtc22AY.34.10.00102
ORF1ab/nsp127L27FCtcTtc22AY.370.000632
ORF1ab/nsp127L27FCtcTtc22AY.460.000208
ORF1ab/nsp127L27FCtcTtc22AY.46.50.000397
ORF1ab/nsp127L27FCtcTtc22AY.540.000191
ORF1ab/nsp127L27FCtcTtc22AY.610.00021
ORF1ab/nsp127L27FCtcTtc22AY.740.000231
ORF1ab/nsp127L27FCtcTtc22AY.910.001461
ORF1ab/nsp127L27FCtcTtc22B.1.1.2140.000111
ORF1ab/nsp127L27FCtcTtc22B.1.1.2410.004141
ORF1ab/nsp127L27FCtcTtc22B.1.1.2580.006515
ORF1ab/nsp127L27FCtcTtc22B.1.1.280.000622
ORF1ab/nsp127L27FCtcTtc22B.1.1.4060.012987
ORF1ab/nsp127L27FCtcTtc22B.1.177.120.000303
ORF1ab/nsp127L27FCtcTtc22B.1.177.210.000153
ORF1ab/nsp127L27FCtcTtc22B.1.177.50.002484
ORF1ab/nsp127L27FCtcTtc22B.1.177.770.001452
ORF1ab/nsp127L27FCtcTtc22B.1.1990.008264
ORF1ab/nsp127L27FCtcTtc22B.1.2210.000142
ORF1ab/nsp127L27FCtcTtc22B.1.2410.001623
ORF1ab/nsp127L27FCtcTtc22B.1.258.140.001961
ORF1ab/nsp127L27FCtcTtc22B.1.258.180.2
ORF1ab/nsp127L27FCtcTtc22B.1.3960.001411
ORF1ab/nsp127L27FCtcTtc22B.1.3990.003868
ORF1ab/nsp127L27FCtcTtc22B.1.466.20.000782
ORF1ab/nsp127L27FCtcTtc22B.1.5250.000226
ORF1ab/nsp127L27FCtcTtc22B.1.5770.001375
ORF1ab/nsp127L27FCtcTtc22B.1.5950.000522
ORF1ab/nsp127L27FCtcTtc22B.1.617.10.000258
ORF1ab/nsp127L27FCtcTtc22C.36.30.001134
ORF1ab/nsp127L27FCtcTtc22P.1.10.000635
ORF1ab/nsp127L27FCtcTtc22P.1.160.000748
ORF1ab/nsp127L27FCtcTtc11A.10.000282
ORF1ab/nsp127L27FCtcTtc11AD.20.000219
ORF1ab/nsp127L27FCtcTtc11AW.10.003049
ORF1ab/nsp127L27FCtcTtc11AY.1060.000335
ORF1ab/nsp127L27FCtcTtc11AY.120.20.001285
ORF1ab/nsp127L27FCtcTtc11AY.120.2.10.000498
ORF1ab/nsp127L27FCtcTtc11AY.16.10.00047
ORF1ab/nsp127L27FCtcTtc11AY.320.000532
ORF1ab/nsp127L27FCtcTtc11AY.340.000097
ORF1ab/nsp127L27FCtcTtc11AY.360.000148
ORF1ab/nsp127L27FCtcTtc11AY.380.000499
ORF1ab/nsp127L27FCtcTtc11AY.4.2.10.000149
ORF1ab/nsp127L27FCtcTtc11AY.410.000294
ORF1ab/nsp127L27FCtcTtc11AY.46.20.000635
ORF1ab/nsp127L27FCtcTtc11AY.5.10.003759
ORF1ab/nsp127L27FCtcTtc11AY.5.30.000337
ORF1ab/nsp127L27FCtcTtc11AY.5.40.000277
ORF1ab/nsp127L27FCtcTtc11AY.530.000288
ORF1ab/nsp127L27FCtcTtc11AY.680.000274
ORF1ab/nsp127L27FCtcTtc11AY.780.001541
ORF1ab/nsp127L27FCtcTtc11AY.840.000437
ORF1ab/nsp127L27FCtcTtc11AY.850.000427
ORF1ab/nsp127L27FCtcTtc11AY.9.10.000084
ORF1ab/nsp127L27FCtcTtc11AY.930.000273
ORF1ab/nsp127L27FCtcTtc11AY.950.000761
ORF1ab/nsp127L27FCtcTtc11AY.980.000079
ORF1ab/nsp127L27FCtcTtc11AZ.10.000867
ORF1ab/nsp127L27FCtcTtc11B.1.1.10.000327
ORF1ab/nsp127L27FCtcTtc11B.1.1.2160.00089
ORF1ab/nsp127L27FCtcTtc11B.1.1.2200.001859
ORF1ab/nsp127L27FCtcTtc11B.1.1.2220.000204
ORF1ab/nsp127L27FCtcTtc11B.1.1.2310.003096
ORF1ab/nsp127L27FCtcTtc11B.1.1.2750.011236
ORF1ab/nsp127L27FCtcTtc11B.1.1.2880.001916
ORF1ab/nsp127L27FCtcTtc11B.1.1.3160.000925
ORF1ab/nsp127L27FCtcTtc11B.1.1.3260.001761
ORF1ab/nsp127L27FCtcTtc11B.1.1.3720.000689
ORF1ab/nsp127L27FCtcTtc11B.1.1.4160.000905
ORF1ab/nsp127L27FCtcTtc11B.1.1.4340.000349
ORF1ab/nsp127L27FCtcTtc11B.1.1.5230.001563
ORF1ab/nsp127L27FCtcTtc11B.1.1.590.006494
ORF1ab/nsp127L27FCtcTtc11B.1.1.80.003584
ORF1ab/nsp127L27FCtcTtc11B.1.1110.001175
ORF1ab/nsp127L27FCtcTtc11B.1.160.200.008929
ORF1ab/nsp127L27FCtcTtc11B.1.1690.014925
ORF1ab/nsp127L27FCtcTtc11B.1.177.230.003236
ORF1ab/nsp127L27FCtcTtc11B.1.177.280.007407
ORF1ab/nsp127L27FCtcTtc11B.1.177.350.000691
ORF1ab/nsp127L27FCtcTtc11B.1.177.40.000211
ORF1ab/nsp127L27FCtcTtc11B.1.177.570.000281
ORF1ab/nsp127L27FCtcTtc11B.1.177.600.000218
ORF1ab/nsp127L27FCtcTtc11B.1.2110.025
ORF1ab/nsp127L27FCtcTtc11B.1.221.40.004167
ORF1ab/nsp127L27FCtcTtc11B.1.230.006061
ORF1ab/nsp127L27FCtcTtc11B.1.258.170.000104
ORF1ab/nsp127L27FCtcTtc11B.1.258.210.007752
ORF1ab/nsp127L27FCtcTtc11B.1.2790.000514
ORF1ab/nsp127L27FCtcTtc11B.1.3050.002151
ORF1ab/nsp127L27FCtcTtc11B.1.351.20.000303
ORF1ab/nsp127L27FCtcTtc11B.1.351.30.000876
ORF1ab/nsp127L27FCtcTtc11B.1.36.10.00114
ORF1ab/nsp127L27FCtcTtc11B.1.36.290.000517
ORF1ab/nsp127L27FCtcTtc11B.1.4280.00102
ORF1ab/nsp127L27FCtcTtc11B.1.4330.003195
ORF1ab/nsp127L27FCtcTtc11B.1.4370.020833
ORF1ab/nsp127L27FCtcTtc11B.1.575.10.002439
ORF1ab/nsp127L27FCtcTtc11B.1.5760.000907
ORF1ab/nsp127L27FCtcTtc11B.1.5820.000491
ORF1ab/nsp127L27FCtcTtc11B.1.595.10.005848
ORF1ab/nsp127L27FCtcTtc11B.1.621.10.000506
ORF1ab/nsp127L27FCtcTtc11B.1.80.001972
ORF1ab/nsp127L27FCtcTtc11B.6.60.000889
ORF1ab/nsp127L27FCtcTtc11C.180.002591
ORF1ab/nsp127L27FCtcTtc11C.350.000774
ORF1ab/nsp127L27FCtcTtc11N.100.029412
ORF1ab/nsp127L27FCtcTtc11N.50.001767
ORF1ab/nsp127L27FCtCTtT11P.1.170.000162
ORF1ab/nsp127L27FCtcTtc11P.20.000187