CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = L16del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp116L16del2L16del2delCTc--c1380.615385311-313
ORF1ab/nsp116L16del2L16del2delcTCc--1350.384615311-313

Details of the mutation L16del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp116L16del2CTc--c813All0.000002
ORF1ab/nsp116L16del2cTCc--513All0.000001
ORF1ab/nsp116L16del2CTc--c57B.1.1.70.000004
ORF1ab/nsp116L16del2cTCc--27B.1.1.70.000002
ORF1ab/nsp116L16del2cTCc--11AY.40.000002
ORF1ab/nsp116L16del2cTCc--11AY.480.000465
ORF1ab/nsp116L16del2CTc--c11AY.90.000068
ORF1ab/nsp116L16del2cTCc--11B.1.177.560.000668
ORF1ab/nsp116L16del2CTc--c11B.1.4150.014286
ORF1ab/nsp116L16del2CTc--c11B.1.6210.000089