CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = L16S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp116L16SL16SnonsynCTcTCc1070.7311-313
ORF1ab/nsp116L16SL16SnonsynCTCTCA1020.2311-313
ORF1ab/nsp116L16SL16SnonsynCTCTCG1010.1311-313

Details of the mutation L16S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp116L16SCTcTCc710All0.000001
ORF1ab/nsp116L16SCTCTCA210All0
ORF1ab/nsp116L16SCTCTCG110All0
ORF1ab/nsp116L16SCTCTCG12B.1.1.5190.00004
ORF1ab/nsp116L16SCTcTCc12B.1.1.5190.00004
ORF1ab/nsp116L16SCTcTCc11AY.250.000006
ORF1ab/nsp116L16SCTcTCc11AY.4.20.000022
ORF1ab/nsp116L16SCTCTCA11B.10.000009
ORF1ab/nsp116L16SCTcTCc11B.1.1.70.000001
ORF1ab/nsp116L16SCTcTCc11B.1.360.000146
ORF1ab/nsp116L16SCTcTCc11B.1.5260.000024
ORF1ab/nsp116L16SCTCTCA11B.1.5380.008065
ORF1ab/nsp116L16SCTcTCc11B.1.617.20.000004