CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = L149A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1149L149AL149AnonsynCTTGCG59240.40678710-712
ORF1ab/nsp1149L149AL149AnonsynCTtGCt59180.305085710-712
ORF1ab/nsp1149L149AL149AnonsynCTTGCA59160.271186710-712
ORF1ab/nsp1149L149AL149AnonsynCTTGCC5910.0169492710-712

Details of the mutation L149A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1149L149ACTTGCG2459All0.000005
ORF1ab/nsp1149L149ACTtGCt1859All0.000003
ORF1ab/nsp1149L149ACTTGCA1659All0.000003
ORF1ab/nsp1149L149ACTTGCC159All0
ORF1ab/nsp1149L149ACTTGCG1741B.1.1.70.000015
ORF1ab/nsp1149L149ACTTGCA1341B.1.1.70.000012
ORF1ab/nsp1149L149ACTtGCt1041B.1.1.70.000009
ORF1ab/nsp1149L149ACTTGCC141B.1.1.70.000001
ORF1ab/nsp1149L149ACTtGCt714B.10.000064
ORF1ab/nsp1149L149ACTTGCG514B.10.000046
ORF1ab/nsp1149L149ACTTGCA214B.10.000018
ORF1ab/nsp1149L149ACTTGCG12AY.250.000006
ORF1ab/nsp1149L149ACTtGCt12AY.250.000006
ORF1ab/nsp1149L149ACTTGCG12B.1.5760.000907
ORF1ab/nsp1149L149ACTTGCA12B.1.5760.000907