CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = L140del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1140L140delL140deldelCTA---1101101683-685

Details of the mutation L140del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1140L140delCTA---110110All0.000021
ORF1ab/nsp1140L140delCTA---1515B.1.1.70.000013
ORF1ab/nsp1140L140delCTA---99AY.40.000014
ORF1ab/nsp1140L140delCTA---77B.1.20.000062
ORF1ab/nsp1140L140delCTA---55AY.30.00005
ORF1ab/nsp1140L140delCTA---55AY.520.004072
ORF1ab/nsp1140L140delCTA---44AY.440.000024
ORF1ab/nsp1140L140delCTA---44AY.9.10.000335
ORF1ab/nsp1140L140delCTA---44B.1.1.330.001684
ORF1ab/nsp1140L140delCTA---44B.1.1.3480.003185
ORF1ab/nsp1140L140delCTA---33AY.430.000013
ORF1ab/nsp1140L140delCTA---33B.1.1600.000094
ORF1ab/nsp1140L140delCTA---33B.1.4890.130435
ORF1ab/nsp1140L140delCTA---22AY.1190.000071
ORF1ab/nsp1140L140delCTA---22AY.250.000012
ORF1ab/nsp1140L140delCTA---22B.10.000018
ORF1ab/nsp1140L140delCTA---22B.1.1.370.000386
ORF1ab/nsp1140L140delCTA---22B.1.1770.000026
ORF1ab/nsp1140L140delCTA---22B.1.4000.000858
ORF1ab/nsp1140L140delCTA---22B.1.4270.000101
ORF1ab/nsp1140L140delCTA---22N.40.008511
ORF1ab/nsp1140L140delCTA---22N.60.014184
ORF1ab/nsp1140L140delCTA---22P.20.000373
ORF1ab/nsp1140L140delCTA---11AU.20.002421
ORF1ab/nsp1140L140delCTA---11AY.1160.000287
ORF1ab/nsp1140L140delCTA---11AY.120.000316
ORF1ab/nsp1140L140delCTA---11AY.200.000039
ORF1ab/nsp1140L140delCTA---11AY.260.000028
ORF1ab/nsp1140L140delCTA---11AY.380.000499
ORF1ab/nsp1140L140delCTA---11AY.4.50.000107
ORF1ab/nsp1140L140delCTA---11AY.650.000533
ORF1ab/nsp1140L140delCTA---11AY.710.000475
ORF1ab/nsp1140L140delCTA---11AY.950.000761
ORF1ab/nsp1140L140delCTA---11B.1.1.3180.000302
ORF1ab/nsp1140L140delCTA---11B.1.160.70.002079
ORF1ab/nsp1140L140delCTA---11B.1.177.40.000211
ORF1ab/nsp1140L140delCTA---11B.1.2340.000132
ORF1ab/nsp1140L140delCTA---11B.1.2580.000067
ORF1ab/nsp1140L140delCTA---11B.1.360.000146
ORF1ab/nsp1140L140delCTA---11B.1.4290.000024
ORF1ab/nsp1140L140delCTA---11B.1.5260.000024
ORF1ab/nsp1140L140delCTA---11B.1.5680.001111
ORF1ab/nsp1140L140delCTA---11B.1.5880.00091
ORF1ab/nsp1140L140delCTA---11B.1.617.20.000004
ORF1ab/nsp1140L140delCTA---11B.1.621.10.000506
ORF1ab/nsp1140L140delCTA---11C.170.055556
ORF1ab/nsp1140L140delCTA---11C.350.000774