CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = H45R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp145H45RH45RnonsyncAtcGt2542541398-400

Details of the mutation H45R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp145H45RcAtcGt254254All0.000049
ORF1ab/nsp145H45RcAtcGt8383AY.40.000129
ORF1ab/nsp145H45RcAtcGt4040B.1.1.70.000036
ORF1ab/nsp145H45RcAtcGt3030AY.980.00237
ORF1ab/nsp145H45RcAtcGt1111B.1.20.000097
ORF1ab/nsp145H45RcAtcGt99AY.440.000055
ORF1ab/nsp145H45RcAtcGt99B.1.4290.000212
ORF1ab/nsp145H45RcAtcGt77B.1.617.20.000026
ORF1ab/nsp145H45RcAtcGt66B.1.6030.06383
ORF1ab/nsp145H45RcAtcGt55AY.98.10.000242
ORF1ab/nsp145H45RcAtcGt44AY.1030.000025
ORF1ab/nsp145H45RcAtcGt44AY.250.000024
ORF1ab/nsp145H45RcAtcGt44AY.390.000099
ORF1ab/nsp145H45RcAtcGt44AY.430.000018
ORF1ab/nsp145H45RcAtcGt33AY.1200.000112
ORF1ab/nsp145H45RcAtcGt33B.1.2580.0002
ORF1ab/nsp145H45RcAtcGt33R.10.00027
ORF1ab/nsp145H45RcAtcGt22B.10.000018
ORF1ab/nsp145H45RcAtcGt22B.1.1.3980.006452
ORF1ab/nsp145H45RcAtcGt22B.1.1770.000026
ORF1ab/nsp145H45RcAtcGt22B.1.177.260.013986
ORF1ab/nsp145H45RcAtcGt22P.10.000032
ORF1ab/nsp145H45RcAtcGt11AY.1100.000113
ORF1ab/nsp145H45RcAtcGt11AY.1210.000135
ORF1ab/nsp145H45RcAtcGt11AY.290.000016
ORF1ab/nsp145H45RcAtcGt11AY.30.00001
ORF1ab/nsp145H45RcAtcGt11AY.420.00004
ORF1ab/nsp145H45RcAtcGt11AY.50.000021
ORF1ab/nsp145H45RcAtcGt11AY.99.20.000092
ORF1ab/nsp145H45RcAtcGt11B.1.1.10.000327
ORF1ab/nsp145H45RcAtcGt11B.1.1.1290.009174
ORF1ab/nsp145H45RcAtcGt11B.1.1.1940.00495
ORF1ab/nsp145H45RcAtcGt11B.1.1.2220.000204
ORF1ab/nsp145H45RcAtcGt11B.1.1.3370.003597
ORF1ab/nsp145H45RcAtcGt11B.1.110.30.000718
ORF1ab/nsp145H45RcAtcGt11B.1.3510.00003
ORF1ab/nsp145H45RcAtcGt11B.1.351.30.000876
ORF1ab/nsp145H45RcAtcGt11B.1.36.370.002778
ORF1ab/nsp145H45RcAtcGt11B.1.3990.001934
ORF1ab/nsp145H45RcAtcGt11B.1.4680.005714
ORF1ab/nsp145H45RcAtcGt11P.1.170.000162