CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = H45H

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp145H45HH45HsyncaTcaC552455241398-400

Details of the mutation H45H within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp145H45HcaTcaC55245524All0.001057
ORF1ab/nsp145H45HcaTcaC25332533AY.40.003942
ORF1ab/nsp145H45HcaTcaC22742274B.1.1.70.002036
ORF1ab/nsp145H45HcaTcaC179179B.1.617.20.000674
ORF1ab/nsp145H45HcaTcaC7575AY.850.032038
ORF1ab/nsp145H45HcaTcaC5252AY.430.00023
ORF1ab/nsp145H45HcaTcaC3636AY.1020.000955
ORF1ab/nsp145H45HcaTcaC2828B.1.20.000247
ORF1ab/nsp145H45HcaTcaC2323AY.250.000138
ORF1ab/nsp145H45HcaTcaC2222B.1.1770.00029
ORF1ab/nsp145H45HcaTcaC1717AJ.10.772727
ORF1ab/nsp145H45HcaTcaC1717AY.1030.000106
ORF1ab/nsp145H45HcaTcaC1717AY.30.000169
ORF1ab/nsp145H45HcaTcaC1616R.10.00144
ORF1ab/nsp145H45HcaTcaC1414AY.340.001358
ORF1ab/nsp145H45HcaTcaC1313B.10.000119
ORF1ab/nsp145H45HcaTcaC1010AY.770.011274
ORF1ab/nsp145H45HcaTcaC99AY.200.00035
ORF1ab/nsp145H45HcaTcaC99AY.380.004493
ORF1ab/nsp145H45HcaTcaC99AY.9.20.000331
ORF1ab/nsp145H45HcaTcaC88AY.390.000198
ORF1ab/nsp145H45HcaTcaC88P.10.000126
ORF1ab/nsp145H45HcaTcaC77AY.1000.000322
ORF1ab/nsp145H45HcaTcaC77AY.290.00011
ORF1ab/nsp145H45HcaTcaC77AY.440.000043
ORF1ab/nsp145H45HcaTcaC66AY.140.000528
ORF1ab/nsp145H45HcaTcaC66AY.300.002374
ORF1ab/nsp145H45HcaTcaC66C.370.000696
ORF1ab/nsp145H45HcaTcaC55AY.1140.001156
ORF1ab/nsp145H45HcaTcaC55AY.230.000349
ORF1ab/nsp145H45HcaTcaC55AY.4.20.000108
ORF1ab/nsp145H45HcaTcaC55AY.420.000201
ORF1ab/nsp145H45HcaTcaC55AY.46.60.000361
ORF1ab/nsp145H45HcaTcaC44B.1.2430.000278
ORF1ab/nsp145H45HcaTcaC44B.1.3510.000119
ORF1ab/nsp145H45HcaTcaC44B.1.5960.000349
ORF1ab/nsp145H45HcaTcaC44B.1.6210.000354
ORF1ab/nsp145H45HcaTcaC33AY.1160.00086
ORF1ab/nsp145H45HcaTcaC33AY.1190.000106
ORF1ab/nsp145H45HcaTcaC33AY.1200.000112
ORF1ab/nsp145H45HcaTcaC33B.1.4290.000071
ORF1ab/nsp145H45HcaTcaC33P.1.150.000697
ORF1ab/nsp145H45HcaTcaC22AY.260.000057
ORF1ab/nsp145H45HcaTcaC22AY.39.10.000079
ORF1ab/nsp145H45HcaTcaC22AY.450.000243
ORF1ab/nsp145H45HcaTcaC22AY.590.001059
ORF1ab/nsp145H45HcaTcaC22AY.60.000082
ORF1ab/nsp145H45HcaTcaC22B.1.1.2160.001781
ORF1ab/nsp145H45HcaTcaC22B.1.1.3110.000716
ORF1ab/nsp145H45HcaTcaC22B.1.1.5260.007092
ORF1ab/nsp145H45HcaTcaC22B.1.1600.000062
ORF1ab/nsp145H45HcaTcaC22B.1.2210.000142
ORF1ab/nsp145H45HcaTcaC22B.1.2580.000133
ORF1ab/nsp145H45HcaTcaC22B.1.2790.001027
ORF1ab/nsp145H45HcaTcaC22P.1.70.000639
ORF1ab/nsp145H45HcaTcaC22Q.30.00029
ORF1ab/nsp145H45HcaTcaC11AY.1170.000085
ORF1ab/nsp145H45HcaTcaC11AY.1180.000063
ORF1ab/nsp145H45HcaTcaC11AY.130.000161
ORF1ab/nsp145H45HcaTcaC11AY.3.10.000085
ORF1ab/nsp145H45HcaTcaC11AY.360.000148
ORF1ab/nsp145H45HcaTcaC11AY.4.50.000107
ORF1ab/nsp145H45HcaTcaC11AY.410.000294
ORF1ab/nsp145H45HcaTcaC11AY.460.000104
ORF1ab/nsp145H45HcaTcaC11AY.50.000021
ORF1ab/nsp145H45HcaTcaC11AY.540.000095
ORF1ab/nsp145H45HcaTcaC11AY.740.000116
ORF1ab/nsp145H45HcaTcaC11AY.90.000068
ORF1ab/nsp145H45HcaTcaC11AY.900.000684
ORF1ab/nsp145H45HcaTcaC11AY.920.000287
ORF1ab/nsp145H45HcaTcaC11B.1.10.000018
ORF1ab/nsp145H45HcaTcaC11B.1.1.10.000327
ORF1ab/nsp145H45HcaTcaC11B.1.1.1640.005155
ORF1ab/nsp145H45HcaTcaC11B.1.1.2220.000204
ORF1ab/nsp145H45HcaTcaC11B.1.1.2840.000107
ORF1ab/nsp145H45HcaTcaC11B.1.1.30.008696
ORF1ab/nsp145H45HcaTcaC11B.1.1.3290.003846
ORF1ab/nsp145H45HcaTcaC11B.1.177.310.011494
ORF1ab/nsp145H45HcaTcaC11B.1.177.40.000211
ORF1ab/nsp145H45HcaTcaC11B.1.2320.000537
ORF1ab/nsp145H45HcaTcaC11B.1.258.170.000104
ORF1ab/nsp145H45HcaTcaC11B.1.30.002618
ORF1ab/nsp145H45HcaTcaC11B.1.3200.001245
ORF1ab/nsp145H45HcaTcaC11B.1.351.30.000876
ORF1ab/nsp145H45HcaTcaC11B.1.4270.00005
ORF1ab/nsp145H45HcaTcaC11B.1.617.10.000129
ORF1ab/nsp145H45HcaTcaC11B.6.60.000889
ORF1ab/nsp145H45HcaTcaC11Q.10.000126