CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = G82del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp182G82del1G82del1delGgT-gN89510.573034509-511
ORF1ab/nsp182G82del1G82del1delggTgg-89200.224719509-511
ORF1ab/nsp182G82del1G82del1delGGT-NN89110.123596509-511
ORF1ab/nsp182G82del1G82del1delGgt-gt8950.0561798509-511
ORF1ab/nsp182G82del1G82del1delGGt-Nt8910.011236509-511
ORF1ab/nsp182G82del1G82del1delgGTgA-8910.011236509-511

Details of the mutation G82del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp182G82del1GgT-gN5189All0.00001
ORF1ab/nsp182G82del1ggTgg-2089All0.000004
ORF1ab/nsp182G82del1GGT-NN1189All0.000002
ORF1ab/nsp182G82del1Ggt-gt589All0.000001
ORF1ab/nsp182G82del1GGt-Nt189All0
ORF1ab/nsp182G82del1gGTgA-189All0
ORF1ab/nsp182G82del1GgT-gN1524AY.40.000023
ORF1ab/nsp182G82del1GGT-NN624AY.40.000009
ORF1ab/nsp182G82del1ggTgg-324AY.40.000005
ORF1ab/nsp182G82del1GgT-gN914B.1.617.20.000034
ORF1ab/nsp182G82del1ggTgg-514B.1.617.20.000019
ORF1ab/nsp182G82del1GgT-gN47AY.4.20.000087
ORF1ab/nsp182G82del1GGT-NN27AY.4.20.000043
ORF1ab/nsp182G82del1GGt-Nt17AY.4.20.000022
ORF1ab/nsp182G82del1GgT-gN56B.1.1.70.000004
ORF1ab/nsp182G82del1Ggt-gt16B.1.1.70.000001
ORF1ab/nsp182G82del1GgT-gN55AY.50.000103
ORF1ab/nsp182G82del1ggTgg-34AY.30.00003
ORF1ab/nsp182G82del1GGT-NN14AY.30.00001
ORF1ab/nsp182G82del1ggTgg-33AY.250.000018
ORF1ab/nsp182G82del1GgT-gN33AY.420.000121
ORF1ab/nsp182G82del1ggTgg-12AY.1200.000037
ORF1ab/nsp182G82del1GgT-gN12AY.1200.000037
ORF1ab/nsp182G82del1GgT-gN22AY.700.000417
ORF1ab/nsp182G82del1ggTgg-12B.10.000009
ORF1ab/nsp182G82del1Ggt-gt12B.10.000009
ORF1ab/nsp182G82del1ggTgg-12B.1.20.000009
ORF1ab/nsp182G82del1Ggt-gt12B.1.20.000009
ORF1ab/nsp182G82del1GgT-gN11AY.1030.000006
ORF1ab/nsp182G82del1GgT-gN11AY.1170.000085
ORF1ab/nsp182G82del1GgT-gN11AY.260.000028
ORF1ab/nsp182G82del1GGT-NN11AY.390.000025
ORF1ab/nsp182G82del1GgT-gN11AY.430.000004
ORF1ab/nsp182G82del1ggTgg-11AY.440.000006
ORF1ab/nsp182G82del1GgT-gN11AY.450.000122
ORF1ab/nsp182G82del1GgT-gN11AY.46.50.000198
ORF1ab/nsp182G82del1Ggt-gt11AY.550.000917
ORF1ab/nsp182G82del1GgT-gN11AY.70.000196
ORF1ab/nsp182G82del1GGT-NN11AY.870.000833
ORF1ab/nsp182G82del1ggTgg-11AY.90.000068
ORF1ab/nsp182G82del1Ggt-gt11B.1.177.510.004566
ORF1ab/nsp182G82del1ggTgg-11B.1.2580.000067
ORF1ab/nsp182G82del1gGTgA-11B.1.3260.007576