CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = D75A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp175D75AD75AnonsyngAtgCt70690.985714488-490
ORF1ab/nsp175D75AD75AnonsyngATgCA7010.0142857488-490

Details of the mutation D75A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp175D75AgAtgCt6970All0.000013
ORF1ab/nsp175D75AgATgCA170All0
ORF1ab/nsp175D75AgAtgCt2424AY.1180.001504
ORF1ab/nsp175D75AgAtgCt77B.1.1.70.000006
ORF1ab/nsp175D75AgAtgCt44AY.40.000006
ORF1ab/nsp175D75AgAtgCt44B.1.2410.003247
ORF1ab/nsp175D75AgAtgCt33AY.1200.000112
ORF1ab/nsp175D75AgAtgCt33AY.50.000062
ORF1ab/nsp175D75AgAtgCt33B.1.1.2840.000322
ORF1ab/nsp175D75AgAtgCt33B.1.6210.000266
ORF1ab/nsp175D75AgAtgCt22AY.1000.000092
ORF1ab/nsp175D75AgAtgCt22AY.30.00002
ORF1ab/nsp175D75AgAtgCt22B.1.10.000036
ORF1ab/nsp175D75AgAtgCt22B.1.1770.000026
ORF1ab/nsp175D75AgAtgCt22B.1.617.20.000008
ORF1ab/nsp175D75AgAtgCt11AY.1030.000006
ORF1ab/nsp175D75AgATgCA11AY.250.000006
ORF1ab/nsp175D75AgAtgCt11AY.34.10.00051
ORF1ab/nsp175D75AgAtgCt11AY.4.20.000022
ORF1ab/nsp175D75AgAtgCt11AY.430.000004
ORF1ab/nsp175D75AgAtgCt11AY.70.000196
ORF1ab/nsp175D75AgAtgCt11AY.7.10.000113
ORF1ab/nsp175D75AgAtgCt11B.10.000009
ORF1ab/nsp175D75AgAtgCt11B.1.5250.000113