CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : Mut = D48E

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp148D48ED48EnonsyngaTgaA116750.646552407-409
ORF1ab/nsp148D48ED48EnonsyngaTgaG116410.353448407-409

Details of the mutation D48E within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp148D48EgaTgaA75116All0.000014
ORF1ab/nsp148D48EgaTgaG41116All0.000008
ORF1ab/nsp148D48EgaTgaA2427AY.430.000106
ORF1ab/nsp148D48EgaTgaG327AY.430.000013
ORF1ab/nsp148D48EgaTgaG1718AY.98.10.000823
ORF1ab/nsp148D48EgaTgaA118AY.98.10.000048
ORF1ab/nsp148D48EgaTgaA1616B.1.1.5230.025
ORF1ab/nsp148D48EgaTgaA1213B.1.1.70.000011
ORF1ab/nsp148D48EgaTgaG113B.1.1.70.000001
ORF1ab/nsp148D48EgaTgaG46B.1.617.20.000015
ORF1ab/nsp148D48EgaTgaA26B.1.617.20.000008
ORF1ab/nsp148D48EgaTgaA44B.1.20.000035
ORF1ab/nsp148D48EgaTgaG33Q.70.003333
ORF1ab/nsp148D48EgaTgaG22AY.1020.000053
ORF1ab/nsp148D48EgaTgaG12AY.90.000068
ORF1ab/nsp148D48EgaTgaA12AY.90.000068
ORF1ab/nsp148D48EgaTgaA12B.10.000009
ORF1ab/nsp148D48EgaTgaG12B.10.000009
ORF1ab/nsp148D48EgaTgaA22B.1.177.860.000367
ORF1ab/nsp148D48EgaTgaA22B.1.4290.000047
ORF1ab/nsp148D48EgaTgaA11A.10.000282
ORF1ab/nsp148D48EgaTgaA11AY.1100.000113
ORF1ab/nsp148D48EgaTgaA11AY.1130.000142
ORF1ab/nsp148D48EgaTgaG11AY.116.10.000311
ORF1ab/nsp148D48EgaTgaG11AY.120.000316
ORF1ab/nsp148D48EgaTgaA11AY.1200.000037
ORF1ab/nsp148D48EgaTgaG11AY.30.00001
ORF1ab/nsp148D48EgaTgaG11AY.440.000006
ORF1ab/nsp148D48EgaTgaG11AY.60.000041
ORF1ab/nsp148D48EgaTgaA11AY.610.000105
ORF1ab/nsp148D48EgaTgaG11AY.920.000287
ORF1ab/nsp148D48EgaTgaA11B.1.10.000018
ORF1ab/nsp148D48EgaTgaG11B.1.1.2580.003257
ORF1ab/nsp148D48EgaTgaA11B.1.177.110.001698
ORF1ab/nsp148D48EgaTgaA11B.1.221.30.000833
ORF1ab/nsp148D48EgaTgaG11B.1.2430.00007
ORF1ab/nsp148D48EgaTgaA11B.1.5960.000087
ORF1ab/nsp148D48EgaTgaA11B.1.6370.000073
ORF1ab/nsp148D48EgaTgaG11D.20.000075