CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 94

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp194G94CG94CnonsynGgcTgc147514740.999322545-547
ORF1ab/nsp194G94CG94CnonsynGgCTgT147510.000677966545-547
ORF1ab/nsp194G94GG94GsynggCggT4644500.969828545-547
ORF1ab/nsp194G94GG94GsynggCggA464110.0237069545-547
ORF1ab/nsp194G94GG94GsynggCggG46430.00646552545-547
ORF1ab/nsp194G94SG94SnonsynGgcAgc4534520.997792545-547
ORF1ab/nsp194G94SG94SnonsynGgCAgT45310.00220751545-547
ORF1ab/nsp194G94DG94DnonsyngGcgAc1671671545-547
ORF1ab/nsp194G94delG94deldelGGC---71711545-547
ORF1ab/nsp194G94VG94VnonsyngGcgTc33310.939394545-547
ORF1ab/nsp194G94VG94VnonsyngGCgTG3310.030303545-547
ORF1ab/nsp194G94VG94VnonsyngGCgTA3310.030303545-547
ORF1ab/nsp194G94AG94AnonsyngGcgCc31311545-547
ORF1ab/nsp194G94RG94RnonsynGgcCgc630.5545-547
ORF1ab/nsp194G94RG94RnonsynGgCAgG620.333333545-547
ORF1ab/nsp194G94RG94RnonsynGgCAgA610.166667545-547
ORF1ab/nsp194G94del2G94del2delgGCg--331545-547
ORF1ab/nsp194G94del1G94del1delGgc-gc221545-547
ORF1ab/nsp194G94LG94LnonsynGGcCTc111545-547
ORF1ab/nsp194G94IG94InonsynGGcATc111545-547
ORF1ab/nsp194G94NG94NnonsynGGCAAT111545-547

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp194G94CGgcTgc14741475All0.000282
ORF1ab/nsp194G94CGgCTgT11475All0
ORF1ab/nsp194G94CGgcTgc603603AY.40.000939
ORF1ab/nsp194G94GggCggT450464All0.000086
ORF1ab/nsp194G94GggCggA11464All0.000002
ORF1ab/nsp194G94GggCggG3464All0.000001
ORF1ab/nsp194G94SGgcAgc452453All0.000086
ORF1ab/nsp194G94SGgCAgT1453All0
ORF1ab/nsp194G94DgGcgAc167167All0.000032
ORF1ab/nsp194G94CGgcTgc161161AY.9.10.01348
ORF1ab/nsp194G94CGgcTgc150150AY.50.003097
ORF1ab/nsp194G94SGgcAgc129129B.1.617.20.000486
ORF1ab/nsp194G94GggCggT9898AY.40.000153
ORF1ab/nsp194G94SGgcAgc7373AY.440.000444
ORF1ab/nsp194G94delGGC---7171All0.000014
ORF1ab/nsp194G94GggCggT6164B.1.1.70.000055
ORF1ab/nsp194G94GggCggA264B.1.1.70.000002
ORF1ab/nsp194G94GggCggG164B.1.1.70.000001
ORF1ab/nsp194G94CGgcTgc5959B.1.1.70.000053
ORF1ab/nsp194G94CGgcTgc5959B.1.617.20.000222
ORF1ab/nsp194G94CGgcTgc4242AY.230.002929
ORF1ab/nsp194G94CGgcTgc4242AY.290.000662
ORF1ab/nsp194G94DgGcgAc3737AY.800.041761
ORF1ab/nsp194G94GggCggT3636P.10.000567
ORF1ab/nsp194G94VgGcgTc3133All0.000006
ORF1ab/nsp194G94VgGCgTG133All0
ORF1ab/nsp194G94VgGCgTA133All0
ORF1ab/nsp194G94SGgcAgc3233B.1.1.70.000029
ORF1ab/nsp194G94SGgCAgT133B.1.1.70.000001
ORF1ab/nsp194G94SGgcAgc3333B.1.6210.002921
ORF1ab/nsp194G94CGgcTgc3232AY.1190.00113
ORF1ab/nsp194G94CGgcTgc3232AY.430.000142
ORF1ab/nsp194G94AgGcgCc3131All0.000006
ORF1ab/nsp194G94CGgcTgc2828AY.390.000692
ORF1ab/nsp194G94GggCggT2628B.1.5960.002266
ORF1ab/nsp194G94GggCggA228B.1.5960.000174
ORF1ab/nsp194G94GggCggT2728B.1.617.20.000102
ORF1ab/nsp194G94GggCggA128B.1.617.20.000004
ORF1ab/nsp194G94CGgcTgc2727B.1.2340.003562
ORF1ab/nsp194G94SGgcAgc2626AY.40.00004
ORF1ab/nsp194G94SGgcAgc2525AY.430.000111
ORF1ab/nsp194G94SGgcAgc2525B.1.1.4490.568182
ORF1ab/nsp194G94AgGcgCc2020AY.40.000031
ORF1ab/nsp194G94CGgcTgc1919AY.260.000538
ORF1ab/nsp194G94CGgcTgc1919AY.30.000189
ORF1ab/nsp194G94CGgcTgc1717AY.440.000103
ORF1ab/nsp194G94DgGcgAc1616AY.40.000025
ORF1ab/nsp194G94CGgcTgc1515AY.4.20.000325
ORF1ab/nsp194G94DgGcgAc1313B.1.1.70.000012
ORF1ab/nsp194G94DgGcgAc1313B.1.617.20.000049
ORF1ab/nsp194G94SGgcAgc1212AY.1020.000318
ORF1ab/nsp194G94delGGC---1212B.1.1.70.000011
ORF1ab/nsp194G94DgGcgAc1111AY.1030.000068
ORF1ab/nsp194G94GggCggT1111AY.250.000066
ORF1ab/nsp194G94CGgcTgc1111AY.330.000735
ORF1ab/nsp194G94GggCggT1111B.1.1.10.003594
ORF1ab/nsp194G94CGgcTgc1010AY.1030.000062
ORF1ab/nsp194G94CGgcTgc1010AY.420.000402
ORF1ab/nsp194G94GggCggT1010AY.430.000044
ORF1ab/nsp194G94GggCggT910AY.440.000055
ORF1ab/nsp194G94GggCggA110AY.440.000006
ORF1ab/nsp194G94DgGcgAc1010AY.46.60.000722
ORF1ab/nsp194G94DgGcgAc99AY.250.000054
ORF1ab/nsp194G94CGgcTgc99AY.540.000858
ORF1ab/nsp194G94CGgcTgc99B.1.20.000079
ORF1ab/nsp194G94CGgcTgc88AY.1020.000212
ORF1ab/nsp194G94GggCggT77AY.290.00011
ORF1ab/nsp194G94GggCggT77B.10.000064
ORF1ab/nsp194G94GggCggT77B.1.1.3440.075269
ORF1ab/nsp194G94GggCggT77B.1.4290.000165
ORF1ab/nsp194G94RGgcCgc36All0.000001
ORF1ab/nsp194G94RGgCAgG26All0
ORF1ab/nsp194G94RGgCAgA16All0
ORF1ab/nsp194G94GggCggT66AY.1030.000037
ORF1ab/nsp194G94VgGcgTc66AY.40.000009
ORF1ab/nsp194G94CGgcTgc66B.1.1.2630.009346
ORF1ab/nsp194G94CGgcTgc55AY.1210.000677
ORF1ab/nsp194G94SGgcAgc55AY.130.000805
ORF1ab/nsp194G94AgGcgCc55AY.250.00003
ORF1ab/nsp194G94GggCggT55AY.30.00005
ORF1ab/nsp194G94DgGcgAc55AY.30.00005
ORF1ab/nsp194G94GggCggT55AY.360.000741
ORF1ab/nsp194G94GggCggT55AY.390.000124
ORF1ab/nsp194G94GggCggT55B0.000639
ORF1ab/nsp194G94CGgcTgc55B.10.000046
ORF1ab/nsp194G94CGgcTgc45B.1.10.000073
ORF1ab/nsp194G94CGgCTgT15B.1.10.000018
ORF1ab/nsp194G94GggCggT55B.1.1.4340.001743
ORF1ab/nsp194G94SGgcAgc55B.1.1600.000156
ORF1ab/nsp194G94SGgcAgc55B.1.160.250.055556
ORF1ab/nsp194G94GggCggT55B.1.20.000044
ORF1ab/nsp194G94SGgcAgc55P.10.000079
ORF1ab/nsp194G94GggCggT44AY.1020.000106
ORF1ab/nsp194G94SGgcAgc44AY.200.000155
ORF1ab/nsp194G94VgGcgTc44AY.250.000024
ORF1ab/nsp194G94CGgcTgc44AY.250.000024
ORF1ab/nsp194G94SGgcAgc44AY.260.000113
ORF1ab/nsp194G94DgGcgAc44AY.330.000267
ORF1ab/nsp194G94DgGcgAc44AY.390.000099
ORF1ab/nsp194G94delGGC---44AY.430.000018
ORF1ab/nsp194G94GggCggT44AY.60.000165
ORF1ab/nsp194G94GggCggT34AY.750.000168
ORF1ab/nsp194G94GggCggA14AY.750.000056
ORF1ab/nsp194G94DgGcgAc44B.10.000037
ORF1ab/nsp194G94CGgcTgc44B.1.1.3180.001207
ORF1ab/nsp194G94delGGC---44B.1.1.330.001684
ORF1ab/nsp194G94delGGC---44B.1.1.3480.003185
ORF1ab/nsp194G94VgGcgTc34B.1.1.70.000003
ORF1ab/nsp194G94VgGCgTA14B.1.1.70.000001
ORF1ab/nsp194G94GggCggT44B.1.1770.000053
ORF1ab/nsp194G94delGGC---44B.1.20.000035
ORF1ab/nsp194G94GggCggT44B.1.3510.000119
ORF1ab/nsp194G94CGgcTgc44B.1.5260.000094
ORF1ab/nsp194G94del2gGCg--33All0.000001
ORF1ab/nsp194G94CGgcTgc33AY.1090.002219
ORF1ab/nsp194G94SGgcAgc33AY.1190.000106
ORF1ab/nsp194G94GggCggT33AY.230.000209
ORF1ab/nsp194G94SGgcAgc33AY.250.000018
ORF1ab/nsp194G94SGgcAgc33AY.390.000074
ORF1ab/nsp194G94GggCggT23AY.39.10.000079
ORF1ab/nsp194G94GggCggA13AY.39.10.00004
ORF1ab/nsp194G94delGGC---33AY.4.50.000322
ORF1ab/nsp194G94DgGcgAc33AY.440.000018
ORF1ab/nsp194G94SGgcAgc33AY.450.000365
ORF1ab/nsp194G94SGgcAgc33AY.460.000312
ORF1ab/nsp194G94SGgcAgc33AY.46.10.00308
ORF1ab/nsp194G94SGgcAgc33AY.470.000093
ORF1ab/nsp194G94CGgcTgc33AY.610.000314
ORF1ab/nsp194G94GggCggT33AY.930.000819
ORF1ab/nsp194G94CGgcTgc33B.1.1.2140.000166
ORF1ab/nsp194G94CGgcTgc33B.1.2430.000209
ORF1ab/nsp194G94DgGcgAc33B.1.2580.0002
ORF1ab/nsp194G94VgGcgTc33B.1.617.20.000011
ORF1ab/nsp194G94delGGC---33B.1.617.20.000011
ORF1ab/nsp194G94GggCggT33C.36.30.001702
ORF1ab/nsp194G94CGgcTgc33D.20.000225
ORF1ab/nsp194G94del1Ggc-gc22All0
ORF1ab/nsp194G94CGgcTgc22AY.1000.000092
ORF1ab/nsp194G94SGgcAgc22AY.1000.000092
ORF1ab/nsp194G94DgGcgAc22AY.1020.000053
ORF1ab/nsp194G94SGgcAgc22AY.1030.000012
ORF1ab/nsp194G94GggCggT22AY.1130.000285
ORF1ab/nsp194G94CGgcTgc22AY.120.000632
ORF1ab/nsp194G94VgGcgTc22AY.140.000176
ORF1ab/nsp194G94CGgcTgc22AY.200.000078
ORF1ab/nsp194G94delGGC---22AY.250.000012
ORF1ab/nsp194G94SGgcAgc22AY.29.10.000441
ORF1ab/nsp194G94SGgcAgc22AY.340.000194
ORF1ab/nsp194G94CGgcTgc22AY.340.000194
ORF1ab/nsp194G94CGgcTgc22AY.39.10.000079
ORF1ab/nsp194G94SGgcAgc22AY.39.1.10.001449
ORF1ab/nsp194G94delGGC---22AY.40.000003
ORF1ab/nsp194G94DgGcgAc22AY.4.20.000043
ORF1ab/nsp194G94CGgcTgc22AY.4.50.000215
ORF1ab/nsp194G94GggCggT22AY.420.00008
ORF1ab/nsp194G94DgGcgAc22AY.430.000009
ORF1ab/nsp194G94delGGC---22AY.440.000012
ORF1ab/nsp194G94CGgcTgc22AY.460.000208
ORF1ab/nsp194G94GggCggT22AY.470.000062
ORF1ab/nsp194G94CGgcTgc22AY.470.000062
ORF1ab/nsp194G94SGgcAgc22AY.5.40.000553
ORF1ab/nsp194G94DgGcgAc22AY.540.000191
ORF1ab/nsp194G94GggCggT22AY.550.001835
ORF1ab/nsp194G94CGgcTgc22AY.630.000774
ORF1ab/nsp194G94DgGcgAc22AY.740.000231
ORF1ab/nsp194G94SGgcAgc22AY.750.000112
ORF1ab/nsp194G94CGgcTgc22AY.750.000112
ORF1ab/nsp194G94GggCggT22AY.75.10.000361
ORF1ab/nsp194G94GggCggT22AY.90.000135
ORF1ab/nsp194G94SGgcAgc22AY.990.002099
ORF1ab/nsp194G94CGgcTgc22AY.99.20.000184
ORF1ab/nsp194G94VgGcgTc22B.10.000018
ORF1ab/nsp194G94SGgcAgc22B.1.10.000036
ORF1ab/nsp194G94GggCggT22B.1.10.000036
ORF1ab/nsp194G94GggCggT22B.1.1.2140.000111
ORF1ab/nsp194G94GggCggT22B.1.1.2190.01
ORF1ab/nsp194G94GggCggT22B.1.1.3260.003521
ORF1ab/nsp194G94GggCggT22B.1.1.3620.011236
ORF1ab/nsp194G94CGgcTgc22B.1.1.4330.002849
ORF1ab/nsp194G94delGGC---22B.1.177.40.000422
ORF1ab/nsp194G94SGgcAgc22B.1.20.000018
ORF1ab/nsp194G94VgGcgTc22B.1.20.000018
ORF1ab/nsp194G94SGgcAgc22B.1.2430.000139
ORF1ab/nsp194G94CGgcTgc22B.1.351.20.000605
ORF1ab/nsp194G94GggCggT22B.1.3670.001585
ORF1ab/nsp194G94GggCggT22B.1.3980.005952
ORF1ab/nsp194G94CGgcTgc22B.1.438.10.000215
ORF1ab/nsp194G94SGgcAgc22B.1.5260.000047
ORF1ab/nsp194G94DgGcgAc22B.1.5260.000047
ORF1ab/nsp194G94SGgcAgc22B.1.617.10.000258
ORF1ab/nsp194G94AgGcgCc22B.1.617.20.000008
ORF1ab/nsp194G94SGgcAgc22B.1.6230.001073
ORF1ab/nsp194G94CGgcTgc22B.1.6370.000146
ORF1ab/nsp194G94delGGC---22N.40.008511
ORF1ab/nsp194G94delGGC---22N.60.014184
ORF1ab/nsp194G94GggCggT22P.1.120.000968
ORF1ab/nsp194G94GggCggT22P.1.70.000639
ORF1ab/nsp194G94delGGC---22P.20.000373
ORF1ab/nsp194G94SGgcAgc22P.30.00319
ORF1ab/nsp194G94GggCggG110.055556
ORF1ab/nsp194G94SGgcAgc110.055556
ORF1ab/nsp194G94RGgCAgG110.055556
ORF1ab/nsp194G94delGGC---11A0.000387
ORF1ab/nsp194G94NGGCAAT11All0
ORF1ab/nsp194G94IGGcATc11All0
ORF1ab/nsp194G94LGGcCTc11All0
ORF1ab/nsp194G94GggCggT11AY.1000.000046
ORF1ab/nsp194G94del2gGCg--11AY.1020.000027
ORF1ab/nsp194G94VgGcgTc11AY.1030.000006
ORF1ab/nsp194G94CGgcTgc11AY.1040.001984
ORF1ab/nsp194G94SGgcAgc11AY.1090.00074
ORF1ab/nsp194G94SGgcAgc11AY.1160.000287
ORF1ab/nsp194G94delGGC---11AY.1160.000287
ORF1ab/nsp194G94DgGcgAc11AY.1170.000085
ORF1ab/nsp194G94CGgcTgc11AY.1180.000063
ORF1ab/nsp194G94delGGC---11AY.120.000316
ORF1ab/nsp194G94GggCggT11AY.120.000316
ORF1ab/nsp194G94CGgcTgc11AY.1200.000037
ORF1ab/nsp194G94DgGcgAc11AY.1200.000037
ORF1ab/nsp194G94GggCggT11AY.1210.000135
ORF1ab/nsp194G94CGgcTgc11AY.140.000088
ORF1ab/nsp194G94GggCggA11AY.16.10.00047
ORF1ab/nsp194G94SGgcAgc11AY.16.10.00047
ORF1ab/nsp194G94GggCggT11AY.190.00114
ORF1ab/nsp194G94GggCggT11AY.200.000039
ORF1ab/nsp194G94DgGcgAc11AY.200.000039
ORF1ab/nsp194G94GggCggT11AY.260.000028
ORF1ab/nsp194G94GggCggT11AY.270.000065
ORF1ab/nsp194G94VgGcgTc11AY.290.000016
ORF1ab/nsp194G94SGgcAgc11AY.290.000016
ORF1ab/nsp194G94CGgcTgc11AY.29.10.000221
ORF1ab/nsp194G94DgGcgAc11AY.29.10.000221
ORF1ab/nsp194G94SGgcAgc11AY.30.00001
ORF1ab/nsp194G94AgGcgCc11AY.3.10.000085
ORF1ab/nsp194G94SGgcAgc11AY.320.000532
ORF1ab/nsp194G94GggCggT11AY.330.000067
ORF1ab/nsp194G94GggCggG11AY.340.000097
ORF1ab/nsp194G94VgGcgTc11AY.360.000148
ORF1ab/nsp194G94AgGcgCc11AY.380.000499
ORF1ab/nsp194G94delGGC---11AY.380.000499
ORF1ab/nsp194G94RGgcCgc11AY.39.10.00004
ORF1ab/nsp194G94del2gGCg--11AY.4.50.000107
ORF1ab/nsp194G94LGGcCTc11AY.430.000004
ORF1ab/nsp194G94VgGcgTc11AY.430.000004
ORF1ab/nsp194G94CGgcTgc11AY.450.000122
ORF1ab/nsp194G94DgGcgAc11AY.46.30.000934
ORF1ab/nsp194G94VgGcgTc11AY.50.000021
ORF1ab/nsp194G94RGgcCgc11AY.50.000021
ORF1ab/nsp194G94GggCggT11AY.50.000021
ORF1ab/nsp194G94GggCggT11AY.5.20.002463
ORF1ab/nsp194G94CGgcTgc11AY.5.40.000277
ORF1ab/nsp194G94DgGcgAc11AY.530.000288
ORF1ab/nsp194G94VgGcgTc11AY.550.000917
ORF1ab/nsp194G94CGgcTgc11AY.570.000656
ORF1ab/nsp194G94GggCggT11AY.570.000656
ORF1ab/nsp194G94CGgcTgc11AY.590.00053
ORF1ab/nsp194G94DgGcgAc11AY.60.000041
ORF1ab/nsp194G94CGgcTgc11AY.60.000041
ORF1ab/nsp194G94SGgcAgc11AY.60.000041
ORF1ab/nsp194G94GggCggT11AY.610.000105
ORF1ab/nsp194G94delGGC---11AY.650.000533
ORF1ab/nsp194G94GggCggT11AY.650.000533
ORF1ab/nsp194G94CGgcTgc11AY.680.000274
ORF1ab/nsp194G94GggCggT11AY.70.000196
ORF1ab/nsp194G94CGgcTgc11AY.700.000209
ORF1ab/nsp194G94CGgcTgc11AY.740.000116
ORF1ab/nsp194G94CGgcTgc11AY.80.000606
ORF1ab/nsp194G94RGgCAgA11AY.850.000427
ORF1ab/nsp194G94GggCggT11AY.850.000427
ORF1ab/nsp194G94delGGC---11AY.9.10.000084
ORF1ab/nsp194G94CGgcTgc11AY.9.20.000037
ORF1ab/nsp194G94DgGcgAc11AY.9.20.000037
ORF1ab/nsp194G94SGgcAgc11AY.900.000684
ORF1ab/nsp194G94CGgcTgc11AY.920.000287
ORF1ab/nsp194G94CGgcTgc11AY.950.000761
ORF1ab/nsp194G94delGGC---11AY.950.000761
ORF1ab/nsp194G94SGgcAgc11AY.960.002075
ORF1ab/nsp194G94GggCggT11AY.980.000079
ORF1ab/nsp194G94DgGcgAc11AY.99.20.000092
ORF1ab/nsp194G94DgGcgAc11B0.000128
ORF1ab/nsp194G94CGgcTgc11B0.000128
ORF1ab/nsp194G94SGgcAgc11B0.000128
ORF1ab/nsp194G94delGGC---11B.10.000009
ORF1ab/nsp194G94SGgcAgc11B.10.000009
ORF1ab/nsp194G94del1Ggc-gc11B.1.1.1580.012195
ORF1ab/nsp194G94DgGcgAc11B.1.1.2140.000055
ORF1ab/nsp194G94GggCggT11B.1.1.2220.000204
ORF1ab/nsp194G94GggCggT11B.1.1.2410.00207
ORF1ab/nsp194G94CGgcTgc11B.1.1.2660.012195
ORF1ab/nsp194G94CGgcTgc11B.1.1.280.000311
ORF1ab/nsp194G94GggCggT11B.1.1.280.000311
ORF1ab/nsp194G94GggCggT11B.1.1.3040.002809
ORF1ab/nsp194G94del1Ggc-gc11B.1.1.3060.000438
ORF1ab/nsp194G94IGGcATc11B.1.1.3060.000438
ORF1ab/nsp194G94GggCggT11B.1.1.3720.000689
ORF1ab/nsp194G94CGgcTgc11B.1.1.390.00051
ORF1ab/nsp194G94GggCggA11B.1.1.3980.003226
ORF1ab/nsp194G94delGGC---11B.1.1.4200.001006
ORF1ab/nsp194G94VgGcgTc11B.1.1.4370.010417
ORF1ab/nsp194G94SGgcAgc11B.1.1.4640.001473
ORF1ab/nsp194G94DgGcgAc11B.1.1.4870.005587
ORF1ab/nsp194G94DgGcgAc11B.1.1.5190.00004
ORF1ab/nsp194G94CGgcTgc11B.1.1.5190.00004
ORF1ab/nsp194G94GggCggT11B.1.1.5190.00004
ORF1ab/nsp194G94AgGcgCc11B.1.1.70.000001
ORF1ab/nsp194G94del2gGCg--11B.1.1.70.000001
ORF1ab/nsp194G94CGgcTgc11B.1.1.700.000341
ORF1ab/nsp194G94GggCggT11B.1.1390.000733
ORF1ab/nsp194G94DgGcgAc11B.1.1600.000031
ORF1ab/nsp194G94GggCggA11B.1.1600.000031
ORF1ab/nsp194G94RGgcCgc11B.1.1770.000013
ORF1ab/nsp194G94delGGC---11B.1.1770.000013
ORF1ab/nsp194G94SGgcAgc11B.1.1770.000013
ORF1ab/nsp194G94CGgcTgc11B.1.177.150.000631
ORF1ab/nsp194G94delGGC---11B.1.177.180.00116
ORF1ab/nsp194G94delGGC---11B.1.177.430.001477
ORF1ab/nsp194G94GggCggT11B.1.177.560.000668
ORF1ab/nsp194G94delGGC---11B.1.177.570.000281
ORF1ab/nsp194G94SGgcAgc11B.1.177.730.000566
ORF1ab/nsp194G94GggCggT11B.1.177.750.001041
ORF1ab/nsp194G94VgGcgTc11B.1.177.870.000728
ORF1ab/nsp194G94delGGC---11B.1.1790.003759
ORF1ab/nsp194G94DgGcgAc11B.1.20.000009
ORF1ab/nsp194G94delGGC---11B.1.2110.025
ORF1ab/nsp194G94CGgcTgc11B.1.2210.000071
ORF1ab/nsp194G94GggCggT11B.1.2340.000132
ORF1ab/nsp194G94DgGcgAc11B.1.2340.000132
ORF1ab/nsp194G94delGGC---11B.1.2430.00007
ORF1ab/nsp194G94GggCggT11B.1.2430.00007
ORF1ab/nsp194G94DgGcgAc11B.1.2430.00007
ORF1ab/nsp194G94RGgCAgG11B.1.2580.000067
ORF1ab/nsp194G94GggCggT11B.1.258.110.000396
ORF1ab/nsp194G94GggCggT11B.1.258.170.000104
ORF1ab/nsp194G94GggCggT11B.1.258.70.001912
ORF1ab/nsp194G94CGgcTgc11B.1.3510.00003
ORF1ab/nsp194G94delGGC---11B.1.3510.00003
ORF1ab/nsp194G94SGgcAgc11B.1.3510.00003
ORF1ab/nsp194G94VgGcgTc11B.1.351.20.000303
ORF1ab/nsp194G94delGGC---11B.1.360.000146
ORF1ab/nsp194G94GggCggT11B.1.36.170.000494
ORF1ab/nsp194G94CGgcTgc11B.1.36.290.000517
ORF1ab/nsp194G94CGgcTgc11B.1.36.380.001642
ORF1ab/nsp194G94AgGcgCc11B.1.3690.000285
ORF1ab/nsp194G94GggCggT11B.1.3690.000285
ORF1ab/nsp194G94DgGcgAc11B.1.380.032258
ORF1ab/nsp194G94DgGcgAc11B.1.3890.001002
ORF1ab/nsp194G94GggCggT11B.1.3960.000706
ORF1ab/nsp194G94CGgcTgc11B.1.4110.003704
ORF1ab/nsp194G94delGGC---11B.1.4270.00005
ORF1ab/nsp194G94CGgcTgc11B.1.4270.00005
ORF1ab/nsp194G94delGGC---11B.1.4290.000024
ORF1ab/nsp194G94GggCggT11B.1.466.20.000391
ORF1ab/nsp194G94DgGcgAc11B.1.5090.000866
ORF1ab/nsp194G94GggCggT11B.1.5210.004975
ORF1ab/nsp194G94GggCggT11B.1.5250.000113
ORF1ab/nsp194G94VgGCgTG11B.1.5380.008065
ORF1ab/nsp194G94CGgcTgc11B.1.5760.000907
ORF1ab/nsp194G94delGGC---11B.1.5950.000261
ORF1ab/nsp194G94CGgcTgc11B.1.5960.000087
ORF1ab/nsp194G94DgGcgAc11B.1.617.10.000129
ORF1ab/nsp194G94CGgcTgc11B.1.617.10.000129
ORF1ab/nsp194G94CGgcTgc11B.1.621.10.000506
ORF1ab/nsp194G94DgGcgAc11B.1.6300.005236
ORF1ab/nsp194G94delGGC---11B.300.014706
ORF1ab/nsp194G94NGGCAAT11C.170.055556
ORF1ab/nsp194G94GggCggT11C.350.000774
ORF1ab/nsp194G94delGGC---11C.350.000774
ORF1ab/nsp194G94DgGcgAc11D.20.000075
ORF1ab/nsp194G94CGgcTgc11P.1.140.000048
ORF1ab/nsp194G94SGgcAgc11P.1.170.000162
ORF1ab/nsp194G94SGgcAgc11P.20.000187

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.