CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 85 & Codon = GtT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp185M85VM85VnonsynAtGGtT9587550.00573694518-520

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp185M85VAtGGtT559587All0.000011
ORF1ab/nsp185M85VAtGGtT31717AY.40.000005
ORF1ab/nsp185M85VAtGGtT21534AY.260.000057
ORF1ab/nsp185M85VAtGGtT1620B.1.617.20.000004
ORF1ab/nsp185M85VAtGGtT25458AY.430.000111
ORF1ab/nsp185M85VAtGGtT2225AY.250.000012
ORF1ab/nsp185M85VAtGGtT1167AY.30.00001
ORF1ab/nsp185M85VAtGGtT4161AY.4.20.000087
ORF1ab/nsp185M85VAtGGtT1145AY.190.00114
ORF1ab/nsp185M85VAtGGtT1123AY.420.00004
ORF1ab/nsp185M85VAtGGtT1122AY.750.000056
ORF1ab/nsp185M85VAtGGtT1106AY.50.000021
ORF1ab/nsp185M85VAtGGtT193AY.390.000025
ORF1ab/nsp185M85VAtGGtT186AY.1020.000027
ORF1ab/nsp185M85VAtGGtT181B.10.000009
ORF1ab/nsp185M85VAtGGtT154B.1.1770.000013
ORF1ab/nsp185M85VAtGGtT120B.1.6210.000089
ORF1ab/nsp185M85VAtGGtT117AY.350.000233
ORF1ab/nsp185M85VAtGGtT111P.1.160.000374
ORF1ab/nsp185M85VAtGGtT110B.1.5960.000087
ORF1ab/nsp185M85VAtGGtT16AY.16.10.00047
ORF1ab/nsp185M85VAtGGtT14AY.5.30.000337
ORF1ab/nsp185M85VAtGGtT13A.270.001656
ORF1ab/nsp185M85VAtGGtT12AY.550.000917
ORF1ab/nsp185M85VAtGGtT11B.1.1.4200.001006