CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp1 | 84 | V84V | V84V | syn | gtT | gtG | 4787 | 4256 | 0.889075 | 515-517 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 4256 | 4787 | All | 0.000814 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 935 | 935 | B.1.1.298 | 0.806034 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 681 | 687 | AY.4 | 0.00106 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 350 | 391 | B.1.617.2 | 0.001318 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 277 | 327 | B.1.1.7 | 0.000248 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 146 | 215 | AY.43 | 0.000647 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 93 | 140 | AY.44 | 0.000566 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 123 | 124 | AY.26 | 0.003482 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 105 | 120 | AY.25 | 0.000632 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 107 | 107 | AY.120 | 0.003978 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 102 | 102 | AY.3 | 0.001015 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 77 | 86 | AY.103 | 0.000478 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 83 | 83 | AY.98 | 0.006557 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 80 | B.1.628 | 0.000352 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 62 | 64 | AY.4.2 | 0.001345 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 58 | 58 | AY.75 | 0.003249 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 32 | 51 | B.1 | 0.000293 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 50 | 50 | AY.56 | 0.080257 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 39 | 48 | AY.39 | 0.000964 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 34 | 38 | AY.119 | 0.0012 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 36 | 36 | AY.98.1 | 0.001744 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 23 | 32 | B.1.177 | 0.000303 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 29 | 30 | AY.102 | 0.000769 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 27 | 30 | AY.5 | 0.000558 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 22 | 30 | B.1.2 | 0.000194 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 13 | 30 | B.1.526 | 0.000306 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 28 | 28 | AY.71 | 0.013302 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 7 | 27 | B.1.1 | 0.000127 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 24 | 24 | B.1.1.519 | 0.000953 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 23 | 23 | AY.46.6 | 0.001661 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 22 | 23 | AY.61 | 0.002305 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 13 | 23 | B.1.621 | 0.001151 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 22 | 22 | AY.9.2 | 0.000808 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 21 | 21 | AY.20 | 0.000816 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 19 | 19 | AY.118 | 0.00119 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 15 | 19 | P.1 | 0.000236 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 16 | 18 | AY.47 | 0.000498 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 18 | B.1.1.434 | 0.000697 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 14 | 15 | AY.100 | 0.000644 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 11 | 15 | B.1.221 | 0.000781 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 14 | 14 | AY.24 | 0.006034 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 14 | 14 | AY.29 | 0.000221 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 14 | 14 | B.1.243 | 0.000974 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 8 | 14 | B.1.258.17 | 0.000832 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 13 | 13 | AY.39.1 | 0.000515 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 13 | 13 | AY.7 | 0.002548 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 9 | 12 | AY.33 | 0.000601 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 9 | 11 | AY.23 | 0.000628 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 8 | 11 | B.1.429 | 0.000188 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 11 | 11 | D.2 | 0.000825 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 10 | 10 | AY.46.5 | 0.001984 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 9 | 10 | AY.6 | 0.00037 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 10 | 10 | AY.60 | 0.009381 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 9 | 9 | AY.121 | 0.001218 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 8 | 9 | AY.46 | 0.000833 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 3 | 9 | AY.7.1 | 0.000338 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 9 | 9 | P.1.1 | 0.002859 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 8 | 8 | AY.12 | 0.002528 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 8 | 8 | AY.42 | 0.000322 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 7 | 7 | AY.113 | 0.000997 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 7 | 7 | AY.14 | 0.000616 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 6 | 7 | AY.4.5 | 0.000645 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 3 | 7 | B.1.258 | 0.0002 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 5 | 7 | R.1 | 0.00045 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 6 | 6 | AY.13 | 0.000966 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 6 | 6 | AY.27 | 0.000388 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 6 | 6 | AY.45 | 0.00073 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 6 | 6 | AY.9 | 0.000406 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 6 | 6 | B.1.104 | 0.02214 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 5 | 6 | B.1.177.21 | 0.000382 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 6 | 6 | B.1.377 | 0.027397 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 6 | 6 | P.1.17 | 0.000971 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 5 | 5 | AY.117 | 0.000423 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 5 | 5 | AY.34 | 0.000485 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 5 | 5 | AY.70 | 0.001043 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 5 | 5 | AY.87 | 0.004163 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 4 | 5 | AY.9.1 | 0.000335 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 5 | 5 | B.1.240 | 0.001078 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 4 | 4 | AY.111 | 0.000733 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 4 | 4 | AY.2 | 0.001425 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 4 | 4 | AY.3.1 | 0.000341 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 4 | AY.34.1 | 0.00051 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 4 | 4 | AY.35 | 0.000932 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 4 | 4 | AY.46.4 | 0.000658 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 4 | 4 | AY.74 | 0.000463 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 4 | 4 | B | 0.000511 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 4 | 4 | B.1.1.39 | 0.002039 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 3 | 4 | Q.1 | 0.000379 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 3 | 3 | A.23.1 | 0.002113 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 3 | 3 | AY.101 | 0.001471 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 3 | 3 | AY.114 | 0.000693 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 3 | 3 | AY.16.1 | 0.00141 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 3 | 3 | AY.32 | 0.001597 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 3 | 3 | AY.36 | 0.000445 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 3 | AY.5.4 | 0.000277 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 3 | 3 | AY.54 | 0.000286 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 3 | 3 | AY.59 | 0.001589 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 3 | 3 | AY.73 | 0.001996 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 3 | AY.91 | 0.001461 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 3 | 3 | AY.99 | 0.003148 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 3 | 3 | AY.99.1 | 0.004658 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 3 | 3 | B.1.1.129 | 0.027523 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 3 | 3 | B.1.1.318 | 0.000905 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 3 | B.1.1.50 | 0.000679 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 3 | B.1.1.63 | 0.000386 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 3 | 3 | B.1.160 | 0.000094 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 3 | B.1.351 | 0.000059 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 3 | 3 | B.1.351.2 | 0.000908 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 3 | 3 | B.1.425 | 0.008982 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 3 | 3 | B.1.620 | 0.002838 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 3 | 3 | C.36.3 | 0.001702 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | AY.110 | 0.000225 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | AY.116.1 | 0.000623 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | AY.120.1 | 0.000642 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | AY.37 | 0.000632 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | AY.4.4 | 0.000818 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | AY.53 | 0.000575 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | AY.68 | 0.000547 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | AY.7.2 | 0.001119 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | AY.8 | 0.001212 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | AY.80 | 0.002257 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | AY.88 | 0.001768 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 2 | AY.92 | 0.000287 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | B.1.1.284 | 0.000215 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | B.1.177.72 | 0.00678 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | B.1.36 | 0.000292 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | B.1.400 | 0.000858 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 2 | B.1.427 | 0.00005 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | B.1.509 | 0.001732 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | B.1.637 | 0.000146 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | B.3 | 0.001661 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | C.37 | 0.000232 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | P.1.16 | 0.000748 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | P.1.4 | 0.001953 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | P.3 | 0.00319 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 2 | 2 | Q.2 | 0.001227 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 2 | Q.8 | 0.000165 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | A | 0.000387 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | A.2.3 | 0.004739 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | A.27 | 0.001656 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | AU.1 | 0.001266 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | AY.39.1.1 | 0.000725 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | AY.50 | 0.000799 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | AY.64 | 0.000595 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | AY.89 | 0.004902 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | AY.96 | 0.002075 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | AZ.5 | 0.003509 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.1.135 | 0.004695 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.1.161 | 0.003534 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.1.170 | 0.001247 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.1.222 | 0.000204 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.1.231 | 0.003096 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.1.316 | 0.000925 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.1.334 | 0.016393 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.1.384 | 0.02381 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.1.385 | 0.004464 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.1.52 | 0.012195 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.1.67 | 0.004566 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.160.17 | 0.001701 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.160.21 | 0.020408 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.177.16 | 0.000664 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.177.53 | 0.002392 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.189 | 0.004292 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.199 | 0.004132 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.22 | 0.001318 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.250 | 0.014493 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.252 | 0.006623 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.306 | 0.005714 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.313 | 0.006579 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.324 | 0.001605 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.329 | 0.000608 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.340 | 0.004292 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.35 | 0.008475 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.36.21 | 0.00216 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.545 | 0.014493 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.571 | 0.009709 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.599 | 0.00365 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.605 | 0.005952 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.29 | 0.003509 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | B.49 | 0.05 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | C.30 | 0.001727 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | C.38 | 0.008065 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | L.3 | 0.003546 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp1 | 84 | V84V | gtT | gtG | 1 | 1 | P.1.6 | 0.001946 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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