CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 75 & Codon = Tat

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp175D75YD75YnonsynGatTat1841841488-490

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp175D75YGatTat184184All0.000035
ORF1ab/nsp175D75YGatTat2626AY.40.00004
ORF1ab/nsp175D75YGatTat2323B.1.1.70.000021
ORF1ab/nsp175D75YGatTat2121AY.440.000128
ORF1ab/nsp175D75YGatTat2020B.1.617.20.000075
ORF1ab/nsp175D75YGatTat1616B.1.20.000141
ORF1ab/nsp175D75YGatTat99AY.1070.004194
ORF1ab/nsp175D75YGatTat99AY.1170.000761
ORF1ab/nsp175D75YGatTat88AY.430.000035
ORF1ab/nsp175D75YGatTat44B.10.000037
ORF1ab/nsp175D75YGatTat33AY.230.000209
ORF1ab/nsp175D75YGatTat33AY.290.000047
ORF1ab/nsp175D75YGatTat22AY.116.10.000623
ORF1ab/nsp175D75YGatTat22AY.250.000012
ORF1ab/nsp175D75YGatTat22AY.330.000134
ORF1ab/nsp175D75YGatTat22AY.340.000194
ORF1ab/nsp175D75YGatTat22AY.34.10.00102
ORF1ab/nsp175D75YGatTat22AY.390.000049
ORF1ab/nsp175D75YGatTat22B.1.1.3040.005618
ORF1ab/nsp175D75YGatTat22B.1.4290.000047
ORF1ab/nsp175D75YGatTat11AY.1130.000142
ORF1ab/nsp175D75YGatTat11AY.1190.000035
ORF1ab/nsp175D75YGatTat11AY.1210.000135
ORF1ab/nsp175D75YGatTat11AY.200.000039
ORF1ab/nsp175D75YGatTat11AY.3.10.000085
ORF1ab/nsp175D75YGatTat11AY.420.00004
ORF1ab/nsp175D75YGatTat11AY.46.20.000635
ORF1ab/nsp175D75YGatTat11AY.470.000031
ORF1ab/nsp175D75YGatTat11AY.610.000105
ORF1ab/nsp175D75YGatTat11AY.7.10.000113
ORF1ab/nsp175D75YGatTat11AY.750.000056
ORF1ab/nsp175D75YGatTat11AY.950.000761
ORF1ab/nsp175D75YGatTat11AY.980.000079
ORF1ab/nsp175D75YGatTat11B0.000128
ORF1ab/nsp175D75YGatTat11B.1.1.4090.002833
ORF1ab/nsp175D75YGatTat11B.1.1.5190.00004
ORF1ab/nsp175D75YGatTat11B.1.1770.000013
ORF1ab/nsp175D75YGatTat11B.1.3110.000275
ORF1ab/nsp175D75YGatTat11B.1.3380.008621
ORF1ab/nsp175D75YGatTat11B.1.3510.00003
ORF1ab/nsp175D75YGatTat11B.1.5510.00129
ORF1ab/nsp175D75YGatTat11B.1.5760.000907
ORF1ab/nsp175D75YGatTat11B.1.5960.000087
ORF1ab/nsp175D75YGatTat11B.1.6280.000352
ORF1ab/nsp175D75YGatTat11B.1.6370.000073
ORF1ab/nsp175D75YGatTat11G.10.041667