CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 72

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp172K72KK72KsynaaAaaG6546541479-481
ORF1ab/nsp172K72delK72deldelAAA---1001001479-481
ORF1ab/nsp172K72RK72RnonsynaAaaGa62610.983871479-481
ORF1ab/nsp172K72RK72RnonsynaAAaGG6210.016129479-481
ORF1ab/nsp172K72EK72EnonsynAaaGaa34330.970588479-481
ORF1ab/nsp172K72EK72EnonsynAaAGaG3410.0294118479-481
ORF1ab/nsp172K72NK72NnonsynaaAaaC21120.571429479-481
ORF1ab/nsp172K72NK72NnonsynaaAaaT2190.428571479-481
ORF1ab/nsp172K72QK72QnonsynAaaCaa13131479-481
ORF1ab/nsp172K72TK72TnonsynaAaaCa991479-481
ORF1ab/nsp172K72IK72InonsynaAaaTa650.833333479-481
ORF1ab/nsp172K72IK72InonsynaAAaTC610.166667479-481
ORF1ab/nsp172K72del1K72del1delAaa-aa441479-481
ORF1ab/nsp172K72XK72XnonsynAaaTaa221479-481
ORF1ab/nsp172K72GK72GnonsynAAaGGa210.5479-481
ORF1ab/nsp172K72GK72GnonsynAAAGGG210.5479-481
ORF1ab/nsp172K72DK72DnonsynAaAGaC111479-481
ORF1ab/nsp172K72LK72LnonsynAAaTTa111479-481
ORF1ab/nsp172K72PK72PnonsynAAACCT111479-481

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp172K72KaaAaaG654654All0.000125
ORF1ab/nsp172K72KaaAaaG364364A.280.962963
ORF1ab/nsp172K72KaaAaaG101101B.1.1.70.00009
ORF1ab/nsp172K72delAAA---100100All0.000019
ORF1ab/nsp172K72RaAaaGa6162All0.000012
ORF1ab/nsp172K72RaAAaGG162All0
ORF1ab/nsp172K72KaaAaaG3737B.1.214.10.74
ORF1ab/nsp172K72EAaaGaa3334All0.000006
ORF1ab/nsp172K72EAaAGaG134All0
ORF1ab/nsp172K72RaAaaGa3333B.1.617.20.000124
ORF1ab/nsp172K72delAAA---3030B.1.1.70.000027
ORF1ab/nsp172K72NaaAaaC1221All0.000002
ORF1ab/nsp172K72NaaAaaT921All0.000002
ORF1ab/nsp172K72QAaaCaa1313All0.000002
ORF1ab/nsp172K72KaaAaaG1313P.1.140.000621
ORF1ab/nsp172K72KaaAaaG1111AY.9.10.000921
ORF1ab/nsp172K72KaaAaaG1111B.1.177.570.003091
ORF1ab/nsp172K72EAaaGaa1010B.1.1.70.000009
ORF1ab/nsp172K72TaAaaCa99All0.000002
ORF1ab/nsp172K72KaaAaaG99AY.250.000054
ORF1ab/nsp172K72KaaAaaG99B.10.000082
ORF1ab/nsp172K72KaaAaaG99B.1.10.000163
ORF1ab/nsp172K72KaaAaaG99B.1.20.000079
ORF1ab/nsp172K72KaaAaaG88AY.1030.00005
ORF1ab/nsp172K72QAaaCaa77AY.30.00007
ORF1ab/nsp172K72KaaAaaG66A0.002322
ORF1ab/nsp172K72IaAaaTa56All0.000001
ORF1ab/nsp172K72IaAAaTC16All0
ORF1ab/nsp172K72RaAaaGa66AY.250.000036
ORF1ab/nsp172K72delAAA---66AY.40.000009
ORF1ab/nsp172K72KaaAaaG66AY.440.000037
ORF1ab/nsp172K72KaaAaaG66B0.000767
ORF1ab/nsp172K72delAAA---66B.1.1770.000079
ORF1ab/nsp172K72KaaAaaG66B.1.617.20.000023
ORF1ab/nsp172K72del1Aaa-aa44All0.000001
ORF1ab/nsp172K72NaaAaaC44AY.40.000006
ORF1ab/nsp172K72KaaAaaG44AY.40.000006
ORF1ab/nsp172K72EAaaGaa44AY.40.000006
ORF1ab/nsp172K72delAAA---44B.1.1.330.001684
ORF1ab/nsp172K72delAAA---44B.1.1.3480.003185
ORF1ab/nsp172K72EAaaGaa33A.10.000846
ORF1ab/nsp172K72NaaAaaC23AY.1190.000071
ORF1ab/nsp172K72NaaAaaT13AY.1190.000035
ORF1ab/nsp172K72delAAA---33AY.250.000018
ORF1ab/nsp172K72RaAaaGa33AY.390.000074
ORF1ab/nsp172K72delAAA---33AY.4.50.000322
ORF1ab/nsp172K72delAAA---33AY.430.000013
ORF1ab/nsp172K72RaAaaGa23B.1.10.000036
ORF1ab/nsp172K72RaAAaGG13B.1.10.000018
ORF1ab/nsp172K72RaAaaGa33B.1.1.70.000003
ORF1ab/nsp172K72KaaAaaG33C.310.053571
ORF1ab/nsp172K72KaaAaaG33P.1.170.000485
ORF1ab/nsp172K72XAaaTaa22All0
ORF1ab/nsp172K72GAAAGGG12All0
ORF1ab/nsp172K72GAAaGGa12All0
ORF1ab/nsp172K72KaaAaaG22AY.1020.000053
ORF1ab/nsp172K72KaaAaaG22AY.1190.000071
ORF1ab/nsp172K72delAAA---22AY.1200.000074
ORF1ab/nsp172K72RaAaaGa22AY.260.000057
ORF1ab/nsp172K72NaaAaaC22AY.30.00002
ORF1ab/nsp172K72TaAaaCa22AY.40.000003
ORF1ab/nsp172K72NaaAaaC22AY.440.000012
ORF1ab/nsp172K72QAaaCaa22AY.560.00321
ORF1ab/nsp172K72EAaaGaa22AY.75.10.000361
ORF1ab/nsp172K72KaaAaaG22AY.9.20.000073
ORF1ab/nsp172K72NaaAaaT22B.10.000018
ORF1ab/nsp172K72EAaAGaG12B.1.10.000018
ORF1ab/nsp172K72EAaaGaa12B.1.10.000018
ORF1ab/nsp172K72GAAAGGG12B.1.10.000018
ORF1ab/nsp172K72GAAaGGa12B.1.10.000018
ORF1ab/nsp172K72QAaaCaa22B.1.1.70.000002
ORF1ab/nsp172K72KaaAaaG22B.1.1570.00597
ORF1ab/nsp172K72delAAA---22B.1.2580.000133
ORF1ab/nsp172K72KaaAaaG22B.1.3750.001639
ORF1ab/nsp172K72RaAaaGa22B.1.5260.000047
ORF1ab/nsp172K72delAAA---22B.1.617.20.000008
ORF1ab/nsp172K72NaaAaaC12B.1.617.20.000004
ORF1ab/nsp172K72IaAAaTC12B.1.617.20.000004
ORF1ab/nsp172K72NaaAaaT12B.1.617.20.000004
ORF1ab/nsp172K72IaAaaTa12B.1.617.20.000004
ORF1ab/nsp172K72KaaAaaG22C.140.008658
ORF1ab/nsp172K72KaaAaaG22C.370.000232
ORF1ab/nsp172K72delAAA---22N.40.008511
ORF1ab/nsp172K72delAAA---22N.60.014184
ORF1ab/nsp172K72delAAA---22P.20.000373
ORF1ab/nsp172K72KaaAaaG11A.10.000282
ORF1ab/nsp172K72delAAA---11A.210.00277
ORF1ab/nsp172K72PAAACCT11All0
ORF1ab/nsp172K72LAAaTTa11All0
ORF1ab/nsp172K72DAaAGaC11All0
ORF1ab/nsp172K72EAaaGaa11AY.1030.000006
ORF1ab/nsp172K72RaAaaGa11AY.1110.000183
ORF1ab/nsp172K72delAAA---11AY.1160.000287
ORF1ab/nsp172K72KaaAaaG11AY.1180.000063
ORF1ab/nsp172K72delAAA---11AY.120.000316
ORF1ab/nsp172K72KaaAaaG11AY.1200.000037
ORF1ab/nsp172K72KaaAaaG11AY.1210.000135
ORF1ab/nsp172K72RaAaaGa11AY.160.00038
ORF1ab/nsp172K72del1Aaa-aa11AY.230.00007
ORF1ab/nsp172K72EAaaGaa11AY.250.000006
ORF1ab/nsp172K72EAaaGaa11AY.260.000028
ORF1ab/nsp172K72delAAA---11AY.260.000028
ORF1ab/nsp172K72KaaAaaG11AY.260.000028
ORF1ab/nsp172K72KaaAaaG11AY.30.00001
ORF1ab/nsp172K72EAaaGaa11AY.30.00001
ORF1ab/nsp172K72RaAaaGa11AY.30.00001
ORF1ab/nsp172K72RaAaaGa11AY.370.000316
ORF1ab/nsp172K72delAAA---11AY.380.000499
ORF1ab/nsp172K72EAaaGaa11AY.390.000025
ORF1ab/nsp172K72QAaaCaa11AY.390.000025
ORF1ab/nsp172K72delAAA---11AY.390.000025
ORF1ab/nsp172K72IaAaaTa11AY.40.000002
ORF1ab/nsp172K72RaAaaGa11AY.40.000002
ORF1ab/nsp172K72NaaAaaT11AY.4.20.000022
ORF1ab/nsp172K72EAaaGaa11AY.4.20.000022
ORF1ab/nsp172K72RaAaaGa11AY.430.000004
ORF1ab/nsp172K72KaaAaaG11AY.430.000004
ORF1ab/nsp172K72DAaAGaC11AY.440.000006
ORF1ab/nsp172K72QAaaCaa11AY.440.000006
ORF1ab/nsp172K72del1Aaa-aa11AY.460.000104
ORF1ab/nsp172K72KaaAaaG11AY.470.000031
ORF1ab/nsp172K72EAaaGaa11AY.530.000288
ORF1ab/nsp172K72delAAA---11AY.60.000041
ORF1ab/nsp172K72EAaaGaa11AY.610.000105
ORF1ab/nsp172K72KaaAaaG11AY.7.10.000113
ORF1ab/nsp172K72del1Aaa-aa11AY.90.000068
ORF1ab/nsp172K72TaAaaCa11AY.90.000068
ORF1ab/nsp172K72TaAaaCa11AY.9.10.000084
ORF1ab/nsp172K72delAAA---11AY.9.10.000084
ORF1ab/nsp172K72delAAA---11AY.9.20.000037
ORF1ab/nsp172K72KaaAaaG11AY.930.000273
ORF1ab/nsp172K72delAAA---11AY.950.000761
ORF1ab/nsp172K72TaAaaCa11AY.980.000079
ORF1ab/nsp172K72del1Aaa-aa11B.10.000009
ORF1ab/nsp172K72TaAaaCa11B.10.000009
ORF1ab/nsp172K72delAAA---11B.10.000009
ORF1ab/nsp172K72IaAaaTa11B.10.000009
ORF1ab/nsp172K72XAaaTaa11B.1.10.000018
ORF1ab/nsp172K72NaaAaaT11B.1.10.000018
ORF1ab/nsp172K72LAAaTTa11B.1.10.000018
ORF1ab/nsp172K72IaAaaTa11B.1.10.000018
ORF1ab/nsp172K72delAAA---11B.1.1.1700.001247
ORF1ab/nsp172K72KaaAaaG11B.1.1.1940.00495
ORF1ab/nsp172K72TaAaaCa11B.1.1.2140.000055
ORF1ab/nsp172K72delAAA---11B.1.1.3110.000358
ORF1ab/nsp172K72delAAA---11B.1.1.3220.008772
ORF1ab/nsp172K72KaaAaaG11B.1.1.5190.00004
ORF1ab/nsp172K72NaaAaaT11B.1.1.70.000001
ORF1ab/nsp172K72TaAaaCa11B.1.1.70.000001
ORF1ab/nsp172K72IaAaaTa11B.1.1110.001175
ORF1ab/nsp172K72RaAaaGa11B.1.1600.000031
ORF1ab/nsp172K72EAaaGaa11B.1.160.140.002119
ORF1ab/nsp172K72KaaAaaG11B.1.1700.00431
ORF1ab/nsp172K72EAaaGaa11B.1.1770.000013
ORF1ab/nsp172K72RaAaaGa11B.1.1770.000013
ORF1ab/nsp172K72delAAA---11B.1.177.100.000878
ORF1ab/nsp172K72delAAA---11B.1.177.110.001698
ORF1ab/nsp172K72delAAA---11B.1.177.160.000664
ORF1ab/nsp172K72delAAA---11B.1.177.180.00116
ORF1ab/nsp172K72EAaaGaa11B.1.177.280.007407
ORF1ab/nsp172K72delAAA---11B.1.177.510.004566
ORF1ab/nsp172K72delAAA---11B.1.177.540.000606
ORF1ab/nsp172K72NaaAaaT11B.1.177.540.000606
ORF1ab/nsp172K72delAAA---11B.1.177.570.000281
ORF1ab/nsp172K72NaaAaaT11B.1.177.730.000566
ORF1ab/nsp172K72KaaAaaG11B.1.177.730.000566
ORF1ab/nsp172K72delAAA---11B.1.177.90.001332
ORF1ab/nsp172K72delAAA---11B.1.1790.003759
ORF1ab/nsp172K72delAAA---11B.1.20.000009
ORF1ab/nsp172K72NaaAaaC11B.1.258.170.000104
ORF1ab/nsp172K72KaaAaaG11B.1.3510.00003
ORF1ab/nsp172K72delAAA---11B.1.360.000146
ORF1ab/nsp172K72KaaAaaG11B.1.360.000146
ORF1ab/nsp172K72KaaAaaG11B.1.3960.000706
ORF1ab/nsp172K72XAaaTaa11B.1.3970.004854
ORF1ab/nsp172K72delAAA---11B.1.4270.00005
ORF1ab/nsp172K72KaaAaaG11B.1.4270.00005
ORF1ab/nsp172K72delAAA---11B.1.4290.000024
ORF1ab/nsp172K72KaaAaaG11B.1.4620.007246
ORF1ab/nsp172K72KaaAaaG11B.1.5260.000024
ORF1ab/nsp172K72EAaaGaa11B.1.5740.002151
ORF1ab/nsp172K72KaaAaaG11B.1.5760.000907
ORF1ab/nsp172K72EAaaGaa11B.1.617.20.000004
ORF1ab/nsp172K72PAAACCT11B.1.617.20.000004
ORF1ab/nsp172K72TaAaaCa11B.290.003509
ORF1ab/nsp172K72delAAA---11C.350.000774
ORF1ab/nsp172K72KaaAaaG11D.20.000075
ORF1ab/nsp172K72KaaAaaG11P.10.000016
ORF1ab/nsp172K72RaAaaGa11P.1.120.000484
ORF1ab/nsp172K72RaAaaGa11P.1.140.000048
ORF1ab/nsp172K72KaaAaaG11Q.20.000613
ORF1ab/nsp172K72KaaAaaG11R.10.00009
ORF1ab/nsp172K72delAAA---11U.30.003861