CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 60 & Codon = g-t

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp160V60del1V60del1delgTtg-t1461420.972603443-445

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp160V60del1gTtg-t142146All0.000027
ORF1ab/nsp160V60del1gTtg-t2425AY.40.000037
ORF1ab/nsp160V60del1gTtg-t1517B.1.1.70.000013
ORF1ab/nsp160V60del1gTtg-t1414AY.30.000139
ORF1ab/nsp160V60del1gTtg-t1414B.1.617.20.000053
ORF1ab/nsp160V60del1gTtg-t88AY.430.000035
ORF1ab/nsp160V60del1gTtg-t77AY.290.00011
ORF1ab/nsp160V60del1gTtg-t66B.1.20.000053
ORF1ab/nsp160V60del1gTtg-t55AY.250.00003
ORF1ab/nsp160V60del1gTtg-t45B.10.000037
ORF1ab/nsp160V60del1gTtg-t33AY.1030.000019
ORF1ab/nsp160V60del1gTtg-t33AY.1180.000188
ORF1ab/nsp160V60del1gTtg-t33AY.4.20.000065
ORF1ab/nsp160V60del1gTtg-t33AY.440.000018
ORF1ab/nsp160V60del1gTtg-t22AY.34.10.00102
ORF1ab/nsp160V60del1gTtg-t22AY.470.000062
ORF1ab/nsp160V60del1gTtg-t22AY.50.000041
ORF1ab/nsp160V60del1gTtg-t22AY.750.000112
ORF1ab/nsp160V60del1gTtg-t22B0.000256
ORF1ab/nsp160V60del1gTtg-t22B.1.258.160.003273
ORF1ab/nsp160V60del1gTtg-t22B.1.5260.000047
ORF1ab/nsp160V60del1gTtg-t11AY.140.000088
ORF1ab/nsp160V60del1gTtg-t11AY.200.000039
ORF1ab/nsp160V60del1gTtg-t11AY.260.000028
ORF1ab/nsp160V60del1gTtg-t11AY.340.000097
ORF1ab/nsp160V60del1gTtg-t11AY.390.000025
ORF1ab/nsp160V60del1gTtg-t11AY.39.10.00004
ORF1ab/nsp160V60del1gTtg-t11AY.450.000122
ORF1ab/nsp160V60del1gTtg-t11AY.70.000196
ORF1ab/nsp160V60del1gTtg-t11AY.740.000116
ORF1ab/nsp160V60del1gTtg-t11B.1.10.000018
ORF1ab/nsp160V60del1gTtg-t11B.1.1.40.002976
ORF1ab/nsp160V60del1gTtg-t11B.1.1.4340.000349
ORF1ab/nsp160V60del1gTtg-t11B.1.177.890.02439
ORF1ab/nsp160V60del1gTtg-t11B.1.3510.00003
ORF1ab/nsp160V60del1gTtg-t11B.1.3990.001934
ORF1ab/nsp160V60del1gTtg-t11B.1.4290.000024
ORF1ab/nsp160V60del1gTtg-t11P.10.000016
ORF1ab/nsp160V60del1gTtg-t11P.1.140.000048
ORF1ab/nsp160V60del1gTtg-t11Q.40.000455