CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 48 & Codon = gCt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp148D48AD48AnonsyngAtgCt57571407-409

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp148D48AgAtgCt5757All0.000011
ORF1ab/nsp148D48AgAtgCt1212AY.40.000019
ORF1ab/nsp148D48AgAtgCt1212B.1.1.70.000011
ORF1ab/nsp148D48AgAtgCt77AY.440.000043
ORF1ab/nsp148D48AgAtgCt66B.1.617.20.000023
ORF1ab/nsp148D48AgAtgCt55B.1.20.000044
ORF1ab/nsp148D48AgAtgCt22B.10.000018
ORF1ab/nsp148D48AgAtgCt22B.1.4290.000047
ORF1ab/nsp148D48AgAtgCt11A.2.20.001689
ORF1ab/nsp148D48AgAtgCt11AY.1030.000006
ORF1ab/nsp148D48AgAtgCt11AY.290.000016
ORF1ab/nsp148D48AgAtgCt11AY.4.20.000022
ORF1ab/nsp148D48AgAtgCt11AY.410.000294
ORF1ab/nsp148D48AgAtgCt11AY.430.000004
ORF1ab/nsp148D48AgAtgCt11AY.50.000021
ORF1ab/nsp148D48AgAtgCt11B.1.1.2670.010101
ORF1ab/nsp148D48AgAtgCt11B.1.1.5190.00004
ORF1ab/nsp148D48AgAtgCt11B.1.177.540.000606
ORF1ab/nsp148D48AgAtgCt11B.1.5260.000024