CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 45

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp145H45HH45HsyncaTcaC552455241398-400
ORF1ab/nsp145H45YH45YnonsynCatTat404240421398-400
ORF1ab/nsp145H45RH45RnonsyncAtcGt2542541398-400
ORF1ab/nsp145H45QH45QnonsyncaTcaG1701400.823529398-400
ORF1ab/nsp145H45QH45QnonsyncaTcaA170300.176471398-400
ORF1ab/nsp145H45delH45deldelCAT---1221221398-400
ORF1ab/nsp145H45NH45NnonsynCatAat49491398-400
ORF1ab/nsp145H45DH45DnonsynCatGat13131398-400
ORF1ab/nsp145H45LH45LnonsyncAtcTt771398-400
ORF1ab/nsp145H45PH45PnonsyncAtcCt661398-400
ORF1ab/nsp145H45del1H45del1delcaTca-540.8398-400
ORF1ab/nsp145H45del1H45del1delCat-at510.2398-400
ORF1ab/nsp145H45EH45EnonsynCaTGaA331398-400
ORF1ab/nsp145H45del2H45del2delcATc--320.666667398-400
ORF1ab/nsp145H45del2H45del2delCAt--t310.333333398-400
ORF1ab/nsp145H45SH45SnonsynCAtTCt111398-400
ORF1ab/nsp145H45CH45CnonsynCAtTGt111398-400
ORF1ab/nsp145H45FH45FnonsynCAtTTt111398-400

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp145H45HcaTcaC55245524All0.001057
ORF1ab/nsp145H45YCatTat40424042All0.000773
ORF1ab/nsp145H45HcaTcaC25332533AY.40.003942
ORF1ab/nsp145H45HcaTcaC22742274B.1.1.70.002036
ORF1ab/nsp145H45YCatTat13051305B.1.1.70.001168
ORF1ab/nsp145H45YCatTat485485AY.1030.003011
ORF1ab/nsp145H45YCatTat287287AY.40.000447
ORF1ab/nsp145H45RcAtcGt254254All0.000049
ORF1ab/nsp145H45HcaTcaC179179B.1.617.20.000674
ORF1ab/nsp145H45YCatTat177177B.1.617.20.000666
ORF1ab/nsp145H45QcaTcaG140170All0.000027
ORF1ab/nsp145H45QcaTcaA30170All0.000006
ORF1ab/nsp145H45delCAT---122122All0.000023
ORF1ab/nsp145H45YCatTat119119AY.440.000724
ORF1ab/nsp145H45YCatTat108108B.1.1770.001422
ORF1ab/nsp145H45YCatTat9898AY.430.000434
ORF1ab/nsp145H45RcAtcGt8383AY.40.000129
ORF1ab/nsp145H45YCatTat8080B.1.5260.00188
ORF1ab/nsp145H45YCatTat7878AY.1200.0029
ORF1ab/nsp145H45YCatTat7777B.1.10.001397
ORF1ab/nsp145H45HcaTcaC7575AY.850.032038
ORF1ab/nsp145H45QcaTcaG7070B.1.1.2220.01428
ORF1ab/nsp145H45YCatTat5656AY.250.000337
ORF1ab/nsp145H45HcaTcaC5252AY.430.00023
ORF1ab/nsp145H45YCatTat5252B.1.20.000458
ORF1ab/nsp145H45YCatTat5151AY.30.000507
ORF1ab/nsp145H45YCatTat5050B.10.000458
ORF1ab/nsp145H45NCatAat4949All0.000009
ORF1ab/nsp145H45YCatTat4444B.1.1.3110.015759
ORF1ab/nsp145H45YCatTat4444B.1.6230.023605
ORF1ab/nsp145H45RcAtcGt4040B.1.1.70.000036
ORF1ab/nsp145H45HcaTcaC3636AY.1020.000955
ORF1ab/nsp145H45YCatTat3535AY.1020.000928
ORF1ab/nsp145H45YCatTat3535B.1.2580.002329
ORF1ab/nsp145H45RcAtcGt3030AY.980.00237
ORF1ab/nsp145H45YCatTat2828AY.980.002212
ORF1ab/nsp145H45delCAT---2828B.1.1.70.000025
ORF1ab/nsp145H45HcaTcaC2828B.1.20.000247
ORF1ab/nsp145H45YCatTat2626AY.200.00101
ORF1ab/nsp145H45YCatTat2525AY.29.10.005513
ORF1ab/nsp145H45YCatTat2525AY.50.000516
ORF1ab/nsp145H45QcaTcaG2124B.1.1.70.000019
ORF1ab/nsp145H45QcaTcaA324B.1.1.70.000003
ORF1ab/nsp145H45HcaTcaC2323AY.250.000138
ORF1ab/nsp145H45QcaTcaG2323AY.260.000651
ORF1ab/nsp145H45HcaTcaC2222B.1.1770.00029
ORF1ab/nsp145H45YCatTat2121AY.1190.000741
ORF1ab/nsp145H45YCatTat2121B.1.5960.00183
ORF1ab/nsp145H45YCatTat2020A.50.038462
ORF1ab/nsp145H45YCatTat2020AY.500.015987
ORF1ab/nsp145H45YCatTat2020B.1.1.5190.000794
ORF1ab/nsp145H45YCatTat2020B.1.6370.001461
ORF1ab/nsp145H45YCatTat1919B.1.2190.179245
ORF1ab/nsp145H45YCatTat1818AY.290.000284
ORF1ab/nsp145H45YCatTat1818B.1.177.810.003408
ORF1ab/nsp145H45HcaTcaC1717AJ.10.772727
ORF1ab/nsp145H45HcaTcaC1717AY.1030.000106
ORF1ab/nsp145H45YCatTat1717AY.260.000481
ORF1ab/nsp145H45HcaTcaC1717AY.30.000169
ORF1ab/nsp145H45YCatTat1616AY.4.20.000347
ORF1ab/nsp145H45YCatTat1616AY.4.2.10.002384
ORF1ab/nsp145H45HcaTcaC1616R.10.00144
ORF1ab/nsp145H45HcaTcaC1414AY.340.001358
ORF1ab/nsp145H45delCAT---1414AY.40.000022
ORF1ab/nsp145H45YCatTat1414B.1.2400.003018
ORF1ab/nsp145H45YCatTat1414B.1.3510.000416
ORF1ab/nsp145H45NCatAat1414B.1.617.20.000053
ORF1ab/nsp145H45YCatTat1414P.10.000221
ORF1ab/nsp145H45YCatTat1313A.270.021523
ORF1ab/nsp145H45DCatGat1313All0.000002
ORF1ab/nsp145H45YCatTat1313AY.390.000321
ORF1ab/nsp145H45HcaTcaC1313B.10.000119
ORF1ab/nsp145H45YCatTat1212AY.1210.001624
ORF1ab/nsp145H45YCatTat1212B.1.4290.000282
ORF1ab/nsp145H45QcaTcaA711AY.40.000011
ORF1ab/nsp145H45QcaTcaG411AY.40.000006
ORF1ab/nsp145H45RcAtcGt1111B.1.20.000097
ORF1ab/nsp145H45QcaTcaG1010AY.30.000099
ORF1ab/nsp145H45HcaTcaC1010AY.770.011274
ORF1ab/nsp145H45YCatTat99AY.1000.000414
ORF1ab/nsp145H45HcaTcaC99AY.200.00035
ORF1ab/nsp145H45YCatTat99AY.230.000628
ORF1ab/nsp145H45YCatTat99AY.3.10.000767
ORF1ab/nsp145H45HcaTcaC99AY.380.004493
ORF1ab/nsp145H45RcAtcGt99AY.440.000055
ORF1ab/nsp145H45HcaTcaC99AY.9.20.000331
ORF1ab/nsp145H45YCatTat99B.1.4270.000454
ORF1ab/nsp145H45RcAtcGt99B.1.4290.000212
ORF1ab/nsp145H45YCatTat99P.1.140.00043
ORF1ab/nsp145H45YCatTat88AY.120.10.002568
ORF1ab/nsp145H45YCatTat88AY.330.000534
ORF1ab/nsp145H45HcaTcaC88AY.390.000198
ORF1ab/nsp145H45YCatTat88AY.420.000322
ORF1ab/nsp145H45YCatTat88AY.98.10.000387
ORF1ab/nsp145H45YCatTat88B.1.1600.00025
ORF1ab/nsp145H45delCAT---88B.1.1770.000105
ORF1ab/nsp145H45YCatTat88B.1.177.860.001468
ORF1ab/nsp145H45YCatTat88B.1.2060.006525
ORF1ab/nsp145H45YCatTat88B.1.5170.003416
ORF1ab/nsp145H45HcaTcaC88P.10.000126
ORF1ab/nsp145H45LcAtcTt77All0.000001
ORF1ab/nsp145H45HcaTcaC77AY.1000.000322
ORF1ab/nsp145H45HcaTcaC77AY.290.00011
ORF1ab/nsp145H45NCatAat77AY.350.001631
ORF1ab/nsp145H45NCatAat77AY.40.000011
ORF1ab/nsp145H45HcaTcaC77AY.440.000043
ORF1ab/nsp145H45YCatTat77AY.540.000667
ORF1ab/nsp145H45YCatTat77AY.90.000473
ORF1ab/nsp145H45RcAtcGt77B.1.617.20.000026
ORF1ab/nsp145H45YCatTat77Q.10.000884
ORF1ab/nsp145H45PcAtcCt66All0.000001
ORF1ab/nsp145H45HcaTcaC66AY.140.000528
ORF1ab/nsp145H45HcaTcaC66AY.300.002374
ORF1ab/nsp145H45YCatTat66AY.39.10.000238
ORF1ab/nsp145H45delCAT---66AY.430.000027
ORF1ab/nsp145H45YCatTat66AY.470.000187
ORF1ab/nsp145H45YCatTat66AY.850.002563
ORF1ab/nsp145H45YCatTat66AY.99.20.000553
ORF1ab/nsp145H45YCatTat66B.1.1.2840.000644
ORF1ab/nsp145H45NCatAat66B.1.1.70.000005
ORF1ab/nsp145H45YCatTat66B.1.2340.000792
ORF1ab/nsp145H45YCatTat66B.1.258.170.000624
ORF1ab/nsp145H45YCatTat66B.1.438.20.115385
ORF1ab/nsp145H45RcAtcGt66B.1.6030.06383
ORF1ab/nsp145H45QcaTcaA56B.1.617.20.000019
ORF1ab/nsp145H45QcaTcaG16B.1.617.20.000004
ORF1ab/nsp145H45HcaTcaC66C.370.000696
ORF1ab/nsp145H45YCatTat66P.20.00112
ORF1ab/nsp145H45YCatTat55A.210.01385
ORF1ab/nsp145H45del1caTca-45All0.000001
ORF1ab/nsp145H45del1Cat-at15All0
ORF1ab/nsp145H45HcaTcaC55AY.1140.001156
ORF1ab/nsp145H45HcaTcaC55AY.230.000349
ORF1ab/nsp145H45delCAT---55AY.230.000349
ORF1ab/nsp145H45YCatTat55AY.270.000324
ORF1ab/nsp145H45NCatAat55AY.370.00158
ORF1ab/nsp145H45HcaTcaC55AY.4.20.000108
ORF1ab/nsp145H45HcaTcaC55AY.420.000201
ORF1ab/nsp145H45YCatTat55AY.46.40.000823
ORF1ab/nsp145H45HcaTcaC55AY.46.60.000361
ORF1ab/nsp145H45RcAtcGt55AY.98.10.000242
ORF1ab/nsp145H45YCatTat55B.1.2210.000355
ORF1ab/nsp145H45YCatTat55B.1.4000.002145
ORF1ab/nsp145H45YCatTat55Q.80.000825
ORF1ab/nsp145H45RcAtcGt44AY.1030.000025
ORF1ab/nsp145H45YCatTat44AY.1180.000251
ORF1ab/nsp145H45RcAtcGt44AY.250.000024
ORF1ab/nsp145H45RcAtcGt44AY.390.000099
ORF1ab/nsp145H45RcAtcGt44AY.430.000018
ORF1ab/nsp145H45YCatTat44AY.460.000416
ORF1ab/nsp145H45YCatTat44AY.9.10.000335
ORF1ab/nsp145H45YCatTat44B.1.1.1740.013514
ORF1ab/nsp145H45delCAT---44B.1.1.330.001684
ORF1ab/nsp145H45delCAT---44B.1.1.3480.003185
ORF1ab/nsp145H45YCatTat44B.1.177.540.002426
ORF1ab/nsp145H45HcaTcaC44B.1.2430.000278
ORF1ab/nsp145H45HcaTcaC44B.1.3510.000119
ORF1ab/nsp145H45HcaTcaC44B.1.5960.000349
ORF1ab/nsp145H45HcaTcaC44B.1.6210.000354
ORF1ab/nsp145H45YCatTat44C.370.000464
ORF1ab/nsp145H45ECaTGaA33All0.000001
ORF1ab/nsp145H45del2cATc--23All0
ORF1ab/nsp145H45del2CAt--t13All0
ORF1ab/nsp145H45DCatGat33AY.1030.000019
ORF1ab/nsp145H45YCatTat33AY.1110.000549
ORF1ab/nsp145H45YCatTat33AY.1160.00086
ORF1ab/nsp145H45HcaTcaC33AY.1160.00086
ORF1ab/nsp145H45HcaTcaC33AY.1190.000106
ORF1ab/nsp145H45HcaTcaC33AY.1200.000112
ORF1ab/nsp145H45RcAtcGt33AY.1200.000112
ORF1ab/nsp145H45YCatTat33AY.120.20.003856
ORF1ab/nsp145H45delCAT---33AY.250.000018
ORF1ab/nsp145H45YCatTat33AY.340.000291
ORF1ab/nsp145H45YCatTat33AY.360.000445
ORF1ab/nsp145H45DCatGat33AY.390.000074
ORF1ab/nsp145H45delCAT---33AY.4.50.000322
ORF1ab/nsp145H45YCatTat33AY.610.000314
ORF1ab/nsp145H45YCatTat33AY.750.000168
ORF1ab/nsp145H45YCatTat33AY.870.002498
ORF1ab/nsp145H45YCatTat33AY.9.20.00011
ORF1ab/nsp145H45YCatTat33B0.000383
ORF1ab/nsp145H45QcaTcaG23B.10.000018
ORF1ab/nsp145H45QcaTcaA13B.10.000009
ORF1ab/nsp145H45QcaTcaA23B.1.10.000036
ORF1ab/nsp145H45QcaTcaG13B.1.10.000018
ORF1ab/nsp145H45YCatTat33B.1.1.2650.009464
ORF1ab/nsp145H45YCatTat33B.1.1.2940.003797
ORF1ab/nsp145H45YCatTat33B.1.1.4200.003018
ORF1ab/nsp145H45del1caTca-33B.1.1.70.000003
ORF1ab/nsp145H45YCatTat33B.1.160.240.013274
ORF1ab/nsp145H45YCatTat33B.1.177.40.000633
ORF1ab/nsp145H45YCatTat33B.1.2430.000209
ORF1ab/nsp145H45RcAtcGt33B.1.2580.0002
ORF1ab/nsp145H45YCatTat33B.1.3690.000856
ORF1ab/nsp145H45HcaTcaC33B.1.4290.000071
ORF1ab/nsp145H45YCatTat33B.1.5950.000783
ORF1ab/nsp145H45YCatTat33B.1.6280.001057
ORF1ab/nsp145H45YCatTat33P.1.10.000953
ORF1ab/nsp145H45HcaTcaC33P.1.150.000697
ORF1ab/nsp145H45YCatTat33P.1.160.001122
ORF1ab/nsp145H45QcaTcaA33Q.70.003333
ORF1ab/nsp145H45RcAtcGt33R.10.00027
ORF1ab/nsp145H45YCatTat22A.10.000564
ORF1ab/nsp145H45YCatTat22AU.10.002532
ORF1ab/nsp145H45YCatTat22AY.1130.000285
ORF1ab/nsp145H45YCatTat22AY.1140.000462
ORF1ab/nsp145H45delCAT---22AY.1200.000074
ORF1ab/nsp145H45YCatTat22AY.16.10.00094
ORF1ab/nsp145H45YCatTat22AY.210.003795
ORF1ab/nsp145H45HcaTcaC22AY.260.000057
ORF1ab/nsp145H45YCatTat22AY.320.001065
ORF1ab/nsp145H45HcaTcaC22AY.39.10.000079
ORF1ab/nsp145H45YCatTat22AY.4.40.000818
ORF1ab/nsp145H45NCatAat22AY.430.000009
ORF1ab/nsp145H45QcaTcaA22AY.440.000012
ORF1ab/nsp145H45HcaTcaC22AY.450.000243
ORF1ab/nsp145H45YCatTat22AY.46.60.000144
ORF1ab/nsp145H45YCatTat22AY.5.40.000553
ORF1ab/nsp145H45HcaTcaC22AY.590.001059
ORF1ab/nsp145H45HcaTcaC22AY.60.000082
ORF1ab/nsp145H45YCatTat22AY.60.000082
ORF1ab/nsp145H45YCatTat22AY.650.001066
ORF1ab/nsp145H45YCatTat22AY.710.00095
ORF1ab/nsp145H45YCatTat22AY.780.003082
ORF1ab/nsp145H45LcAtcTt22AY.99.20.000184
ORF1ab/nsp145H45RcAtcGt22B.10.000018
ORF1ab/nsp145H45YCatTat22B.1.1.10.000653
ORF1ab/nsp145H45YCatTat22B.1.1.2140.000111
ORF1ab/nsp145H45HcaTcaC22B.1.1.2160.001781
ORF1ab/nsp145H45YCatTat22B.1.1.280.000622
ORF1ab/nsp145H45HcaTcaC22B.1.1.3110.000716
ORF1ab/nsp145H45YCatTat22B.1.1.3180.000604
ORF1ab/nsp145H45RcAtcGt22B.1.1.3980.006452
ORF1ab/nsp145H45HcaTcaC22B.1.1.5260.007092
ORF1ab/nsp145H45HcaTcaC22B.1.1600.000062
ORF1ab/nsp145H45RcAtcGt22B.1.1770.000026
ORF1ab/nsp145H45RcAtcGt22B.1.177.260.013986
ORF1ab/nsp145H45YCatTat22B.1.177.70.00033
ORF1ab/nsp145H45QcaTcaG22B.1.1790.007519
ORF1ab/nsp145H45HcaTcaC22B.1.2210.000142
ORF1ab/nsp145H45HcaTcaC22B.1.2580.000133
ORF1ab/nsp145H45HcaTcaC22B.1.2790.001027
ORF1ab/nsp145H45YCatTat22B.1.3110.000549
ORF1ab/nsp145H45delCAT---22B.1.36.170.000988
ORF1ab/nsp145H45YCatTat22B.1.3750.001639
ORF1ab/nsp145H45YCatTat22B.1.3800.013245
ORF1ab/nsp145H45YCatTat22B.1.4080.00738
ORF1ab/nsp145H45YCatTat22B.1.5640.000852
ORF1ab/nsp145H45YCatTat22B.1.6090.000959
ORF1ab/nsp145H45delCAT---22B.1.617.20.000008
ORF1ab/nsp145H45YCatTat22B.1.6210.000177
ORF1ab/nsp145H45YCatTat22B.390.004662
ORF1ab/nsp145H45delCAT---22N.40.008511
ORF1ab/nsp145H45delCAT---22N.60.014184
ORF1ab/nsp145H45QcaTcaG22P.10.000032
ORF1ab/nsp145H45RcAtcGt22P.10.000032
ORF1ab/nsp145H45YCatTat22P.1.100.000539
ORF1ab/nsp145H45YCatTat22P.1.170.000324
ORF1ab/nsp145H45YCatTat22P.1.70.000639
ORF1ab/nsp145H45HcaTcaC22P.1.70.000639
ORF1ab/nsp145H45delCAT---22P.20.000373
ORF1ab/nsp145H45HcaTcaC22Q.30.00029
ORF1ab/nsp145H45YCatTat11A0.000387
ORF1ab/nsp145H45delCAT---11A0.000387
ORF1ab/nsp145H45YCatTat11A.20.000662
ORF1ab/nsp145H45YCatTat11A.2.20.001689
ORF1ab/nsp145H45YCatTat11AD.20.000219
ORF1ab/nsp145H45SCAtTCt11All0
ORF1ab/nsp145H45CCAtTGt11All0
ORF1ab/nsp145H45FCAtTTt11All0
ORF1ab/nsp145H45YCatTat11AT.10.005128
ORF1ab/nsp145H45NCatAat11AY.10.000396
ORF1ab/nsp145H45QcaTcaA11AY.1020.000027
ORF1ab/nsp145H45YCatTat11AY.1050.000643
ORF1ab/nsp145H45YCatTat11AY.1060.000335
ORF1ab/nsp145H45YCatTat11AY.1070.000466
ORF1ab/nsp145H45RcAtcGt11AY.1100.000113
ORF1ab/nsp145H45LcAtcTt11AY.1140.000231
ORF1ab/nsp145H45delCAT---11AY.1160.000287
ORF1ab/nsp145H45HcaTcaC11AY.1170.000085
ORF1ab/nsp145H45YCatTat11AY.1170.000085
ORF1ab/nsp145H45HcaTcaC11AY.1180.000063
ORF1ab/nsp145H45YCatTat11AY.120.000316
ORF1ab/nsp145H45delCAT---11AY.120.000316
ORF1ab/nsp145H45QcaTcaA11AY.1200.000037
ORF1ab/nsp145H45RcAtcGt11AY.1210.000135
ORF1ab/nsp145H45HcaTcaC11AY.130.000161
ORF1ab/nsp145H45NCatAat11AY.16.10.00047
ORF1ab/nsp145H45YCatTat11AY.20.000356
ORF1ab/nsp145H45FCAtTTt11AY.230.00007
ORF1ab/nsp145H45PcAtcCt11AY.230.00007
ORF1ab/nsp145H45NCatAat11AY.260.000028
ORF1ab/nsp145H45RcAtcGt11AY.290.000016
ORF1ab/nsp145H45QcaTcaG11AY.290.000016
ORF1ab/nsp145H45DCatGat11AY.30.00001
ORF1ab/nsp145H45RcAtcGt11AY.30.00001
ORF1ab/nsp145H45delCAT---11AY.30.00001
ORF1ab/nsp145H45HcaTcaC11AY.3.10.000085
ORF1ab/nsp145H45PcAtcCt11AY.330.000067
ORF1ab/nsp145H45YCatTat11AY.34.10.00051
ORF1ab/nsp145H45HcaTcaC11AY.360.000148
ORF1ab/nsp145H45LcAtcTt11AY.370.000316
ORF1ab/nsp145H45YCatTat11AY.380.000499
ORF1ab/nsp145H45delCAT---11AY.380.000499
ORF1ab/nsp145H45NCatAat11AY.390.000025
ORF1ab/nsp145H45LcAtcTt11AY.40.000002
ORF1ab/nsp145H45del2cATc--11AY.40.000002
ORF1ab/nsp145H45YCatTat11AY.4.30.000842
ORF1ab/nsp145H45delCAT---11AY.4.40.000409
ORF1ab/nsp145H45DCatGat11AY.4.50.000107
ORF1ab/nsp145H45YCatTat11AY.4.50.000107
ORF1ab/nsp145H45HcaTcaC11AY.4.50.000107
ORF1ab/nsp145H45HcaTcaC11AY.410.000294
ORF1ab/nsp145H45RcAtcGt11AY.420.00004
ORF1ab/nsp145H45SCAtTCt11AY.440.000006
ORF1ab/nsp145H45DCatGat11AY.440.000006
ORF1ab/nsp145H45PcAtcCt11AY.440.000006
ORF1ab/nsp145H45YCatTat11AY.450.000122
ORF1ab/nsp145H45delCAT---11AY.450.000122
ORF1ab/nsp145H45NCatAat11AY.450.000122
ORF1ab/nsp145H45delCAT---11AY.460.000104
ORF1ab/nsp145H45HcaTcaC11AY.460.000104
ORF1ab/nsp145H45YCatTat11AY.46.50.000198
ORF1ab/nsp145H45RcAtcGt11AY.50.000021
ORF1ab/nsp145H45delCAT---11AY.50.000021
ORF1ab/nsp145H45HcaTcaC11AY.50.000021
ORF1ab/nsp145H45YCatTat11AY.5.30.000337
ORF1ab/nsp145H45YCatTat11AY.510.000909
ORF1ab/nsp145H45HcaTcaC11AY.540.000095
ORF1ab/nsp145H45YCatTat11AY.550.000917
ORF1ab/nsp145H45NCatAat11AY.60.000041
ORF1ab/nsp145H45delCAT---11AY.60.000041
ORF1ab/nsp145H45YCatTat11AY.640.000595
ORF1ab/nsp145H45YCatTat11AY.680.000274
ORF1ab/nsp145H45delCAT---11AY.680.000274
ORF1ab/nsp145H45YCatTat11AY.7.10.000113
ORF1ab/nsp145H45YCatTat11AY.700.000209
ORF1ab/nsp145H45YCatTat11AY.730.000665
ORF1ab/nsp145H45HcaTcaC11AY.740.000116
ORF1ab/nsp145H45delCAT---11AY.75.10.00018
ORF1ab/nsp145H45YCatTat11AY.75.10.00018
ORF1ab/nsp145H45HcaTcaC11AY.90.000068
ORF1ab/nsp145H45delCAT---11AY.9.10.000084
ORF1ab/nsp145H45delCAT---11AY.9.20.000037
ORF1ab/nsp145H45HcaTcaC11AY.900.000684
ORF1ab/nsp145H45HcaTcaC11AY.920.000287
ORF1ab/nsp145H45YCatTat11AY.920.000287
ORF1ab/nsp145H45delCAT---11AY.950.000761
ORF1ab/nsp145H45RcAtcGt11AY.99.20.000092
ORF1ab/nsp145H45delCAT---11B.10.000009
ORF1ab/nsp145H45ECaTGaA11B.10.000009
ORF1ab/nsp145H45NCatAat11B.10.000009
ORF1ab/nsp145H45DCatGat11B.10.000009
ORF1ab/nsp145H45HcaTcaC11B.1.10.000018
ORF1ab/nsp145H45HcaTcaC11B.1.1.10.000327
ORF1ab/nsp145H45RcAtcGt11B.1.1.10.000327
ORF1ab/nsp145H45RcAtcGt11B.1.1.1290.009174
ORF1ab/nsp145H45HcaTcaC11B.1.1.1640.005155
ORF1ab/nsp145H45delCAT---11B.1.1.1700.001247
ORF1ab/nsp145H45RcAtcGt11B.1.1.1940.00495
ORF1ab/nsp145H45DCatGat11B.1.1.2160.00089
ORF1ab/nsp145H45HcaTcaC11B.1.1.2220.000204
ORF1ab/nsp145H45RcAtcGt11B.1.1.2220.000204
ORF1ab/nsp145H45YCatTat11B.1.1.2220.000204
ORF1ab/nsp145H45delCAT---11B.1.1.2320.001815
ORF1ab/nsp145H45YCatTat11B.1.1.2430.004082
ORF1ab/nsp145H45HcaTcaC11B.1.1.2840.000107
ORF1ab/nsp145H45YCatTat11B.1.1.2910.000742
ORF1ab/nsp145H45YCatTat11B.1.1.2970.002237
ORF1ab/nsp145H45HcaTcaC11B.1.1.30.008696
ORF1ab/nsp145H45ECaTGaA11B.1.1.3060.000438
ORF1ab/nsp145H45delCAT---11B.1.1.3110.000358
ORF1ab/nsp145H45YCatTat11B.1.1.3170.000412
ORF1ab/nsp145H45delCAT---11B.1.1.3220.008772
ORF1ab/nsp145H45HcaTcaC11B.1.1.3290.003846
ORF1ab/nsp145H45YCatTat11B.1.1.330.000421
ORF1ab/nsp145H45RcAtcGt11B.1.1.3370.003597
ORF1ab/nsp145H45YCatTat11B.1.1.370.000193
ORF1ab/nsp145H45delCAT---11B.1.1.370.000193
ORF1ab/nsp145H45QcaTcaA11B.1.1.3890.006061
ORF1ab/nsp145H45delCAT---11B.1.1.390.00051
ORF1ab/nsp145H45YCatTat11B.1.1.4310.016129
ORF1ab/nsp145H45YCatTat11B.1.1.4330.001425
ORF1ab/nsp145H45YCatTat11B.1.1.4340.000349
ORF1ab/nsp145H45YCatTat11B.1.1.4480.002033
ORF1ab/nsp145H45CCAtTGt11B.1.1.70.000001
ORF1ab/nsp145H45del2CAt--t11B.1.1.70.000001
ORF1ab/nsp145H45PcAtcCt11B.1.1.70.000001
ORF1ab/nsp145H45DCatGat11B.1.1.70.000001
ORF1ab/nsp145H45YCatTat11B.1.1.830.00271
ORF1ab/nsp145H45RcAtcGt11B.1.110.30.000718
ORF1ab/nsp145H45YCatTat11B.1.1110.001175
ORF1ab/nsp145H45delCAT---11B.1.1600.000031
ORF1ab/nsp145H45delCAT---11B.1.177.110.001698
ORF1ab/nsp145H45delCAT---11B.1.177.160.000664
ORF1ab/nsp145H45HcaTcaC11B.1.177.310.011494
ORF1ab/nsp145H45HcaTcaC11B.1.177.40.000211
ORF1ab/nsp145H45delCAT---11B.1.177.40.000211
ORF1ab/nsp145H45YCatTat11B.1.177.440.000519
ORF1ab/nsp145H45delCAT---11B.1.177.510.004566
ORF1ab/nsp145H45YCatTat11B.1.177.560.000668
ORF1ab/nsp145H45del1Cat-at11B.1.177.570.000281
ORF1ab/nsp145H45YCatTat11B.1.177.650.000665
ORF1ab/nsp145H45delCAT---11B.1.177.690.001484
ORF1ab/nsp145H45YCatTat11B.1.177.730.000566
ORF1ab/nsp145H45YCatTat11B.1.177.750.001041
ORF1ab/nsp145H45QcaTcaA11B.1.177.750.001041
ORF1ab/nsp145H45delCAT---11B.1.177.870.000728
ORF1ab/nsp145H45delCAT---11B.1.177.90.001332
ORF1ab/nsp145H45YCatTat11B.1.177.90.001332
ORF1ab/nsp145H45delCAT---11B.1.1790.003759
ORF1ab/nsp145H45YCatTat11B.1.1900.01
ORF1ab/nsp145H45DCatGat11B.1.20.000009
ORF1ab/nsp145H45QcaTcaG11B.1.20.000009
ORF1ab/nsp145H45delCAT---11B.1.20.000009
ORF1ab/nsp145H45QcaTcaA11B.1.2210.000071
ORF1ab/nsp145H45HcaTcaC11B.1.2320.000537
ORF1ab/nsp145H45YCatTat11B.1.2320.000537
ORF1ab/nsp145H45YCatTat11B.1.2410.000812
ORF1ab/nsp145H45NCatAat11B.1.2580.000067
ORF1ab/nsp145H45PcAtcCt11B.1.2580.000067
ORF1ab/nsp145H45YCatTat11B.1.258.110.000396
ORF1ab/nsp145H45HcaTcaC11B.1.258.170.000104
ORF1ab/nsp145H45YCatTat11B.1.2790.000514
ORF1ab/nsp145H45YCatTat11B.1.2840.013158
ORF1ab/nsp145H45HcaTcaC11B.1.30.002618
ORF1ab/nsp145H45HcaTcaC11B.1.3200.001245
ORF1ab/nsp145H45YCatTat11B.1.3200.001245
ORF1ab/nsp145H45YCatTat11B.1.3460.001311
ORF1ab/nsp145H45RcAtcGt11B.1.3510.00003
ORF1ab/nsp145H45HcaTcaC11B.1.351.30.000876
ORF1ab/nsp145H45RcAtcGt11B.1.351.30.000876
ORF1ab/nsp145H45YCatTat11B.1.360.000146
ORF1ab/nsp145H45YCatTat11B.1.36.310.001751
ORF1ab/nsp145H45RcAtcGt11B.1.36.370.002778
ORF1ab/nsp145H45YCatTat11B.1.36.70.004
ORF1ab/nsp145H45PcAtcCt11B.1.3980.002976
ORF1ab/nsp145H45RcAtcGt11B.1.3990.001934
ORF1ab/nsp145H45YCatTat11B.1.4220.000812
ORF1ab/nsp145H45delCAT---11B.1.4270.00005
ORF1ab/nsp145H45HcaTcaC11B.1.4270.00005
ORF1ab/nsp145H45YCatTat11B.1.4280.00102
ORF1ab/nsp145H45delCAT---11B.1.4290.000024
ORF1ab/nsp145H45QcaTcaA11B.1.4290.000024
ORF1ab/nsp145H45YCatTat11B.1.4330.003195
ORF1ab/nsp145H45YCatTat11B.1.438.10.000107
ORF1ab/nsp145H45YCatTat11B.1.4520.013699
ORF1ab/nsp145H45YCatTat11B.1.466.20.000391
ORF1ab/nsp145H45RcAtcGt11B.1.4680.005714
ORF1ab/nsp145H45YCatTat11B.1.4990.00105
ORF1ab/nsp145H45YCatTat11B.1.517.10.005263
ORF1ab/nsp145H45YCatTat11B.1.5250.000113
ORF1ab/nsp145H45QcaTcaG11B.1.5260.000024
ORF1ab/nsp145H45ECaTGaA11B.1.5380.008065
ORF1ab/nsp145H45YCatTat11B.1.5560.007519
ORF1ab/nsp145H45YCatTat11B.1.564.10.001577
ORF1ab/nsp145H45YCatTat11B.1.5740.002151
ORF1ab/nsp145H45YCatTat11B.1.5850.027778
ORF1ab/nsp145H45YCatTat11B.1.5940.03125
ORF1ab/nsp145H45LcAtcTt11B.1.5950.000261
ORF1ab/nsp145H45HcaTcaC11B.1.617.10.000129
ORF1ab/nsp145H45del2cATc--11B.1.617.20.000004
ORF1ab/nsp145H45del1caTca-11B.1.617.20.000004
ORF1ab/nsp145H45YCatTat11B.1.6190.000871
ORF1ab/nsp145H45QcaTcaG11B.1.6210.000089
ORF1ab/nsp145H45YCatTat11B.1.621.10.000506
ORF1ab/nsp145H45HcaTcaC11B.6.60.000889
ORF1ab/nsp145H45YCatTat11C.10.002392
ORF1ab/nsp145H45delCAT---11C.350.000774
ORF1ab/nsp145H45YCatTat11D.20.000075
ORF1ab/nsp145H45YCatTat11N.80.03125
ORF1ab/nsp145H45LcAtcTt11P.10.000016
ORF1ab/nsp145H45RcAtcGt11P.1.170.000162
ORF1ab/nsp145H45HcaTcaC11Q.10.000126
ORF1ab/nsp145H45YCatTat11Q.20.000613
ORF1ab/nsp145H45QcaTcaA11Q.40.000455
ORF1ab/nsp145H45YCatTat11R.10.00009