CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 4

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14L4FL4FnonsynCttTtt360836081275-277
ORF1ab/nsp14L4LL4LsynctTctC171814300.832363275-277
ORF1ab/nsp14L4LL4LsynctTctA17182670.155413275-277
ORF1ab/nsp14L4LL4LsynctTctG1718210.0122235275-277
ORF1ab/nsp14L4delL4deldelCTT---1821821275-277
ORF1ab/nsp14L4IL4InonsynCttAtt1051051275-277
ORF1ab/nsp14L4PL4PnonsyncTtcCt84810.964286275-277
ORF1ab/nsp14L4PL4PnonsyncTTcCC8420.0238095275-277
ORF1ab/nsp14L4PL4PnonsyncTTcCA8410.0119048275-277
ORF1ab/nsp14L4HL4HnonsyncTtcAt27271275-277
ORF1ab/nsp14L4VL4VnonsynCttGtt331275-277
ORF1ab/nsp14L4del2L4del2delcTTc--221275-277
ORF1ab/nsp14L4RL4RnonsyncTtcGt221275-277
ORF1ab/nsp14L4NL4NnonsynCTtAAt111275-277
ORF1ab/nsp14L4TL4TnonsynCTTACG111275-277
ORF1ab/nsp14L4del1L4del1delcTtc-t111275-277

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14L4FCttTtt36083608All0.00069
ORF1ab/nsp14L4FCttTtt19201920A.2.50.958084
ORF1ab/nsp14L4LctTctC14301718All0.000274
ORF1ab/nsp14L4LctTctA2671718All0.000051
ORF1ab/nsp14L4LctTctG211718All0.000004
ORF1ab/nsp14L4LctTctC9571003B.1.1.70.000857
ORF1ab/nsp14L4LctTctA401003B.1.1.70.000036
ORF1ab/nsp14L4LctTctG61003B.1.1.70.000005
ORF1ab/nsp14L4FCttTtt619619A.2.5.20.97327
ORF1ab/nsp14L4LctTctC245245B.1.1.5190.009729
ORF1ab/nsp14L4FCttTtt208208A.2.5.11
ORF1ab/nsp14L4FCttTtt199199B.1.1.70.000178
ORF1ab/nsp14L4delCTT---182182All0.000035
ORF1ab/nsp14L4FCttTtt155155AY.430.000687
ORF1ab/nsp14L4FCttTtt110110AY.440.00067
ORF1ab/nsp14L4ICttAtt105105All0.00002
ORF1ab/nsp14L4LctTctA100100B.1.5250.011316
ORF1ab/nsp14L4FCttTtt9393A.2.5.30.958763
ORF1ab/nsp14L4FCttTtt8686AY.40.000134
ORF1ab/nsp14L4PcTtcCt8184All0.000015
ORF1ab/nsp14L4PcTTcCC284All0
ORF1ab/nsp14L4PcTTcCA184All0
ORF1ab/nsp14L4LctTctC5254B.1.5260.001222
ORF1ab/nsp14L4LctTctA254B.1.5260.000047
ORF1ab/nsp14L4delCTT---4949B.1.1.70.000044
ORF1ab/nsp14L4PcTtcCt4444B.1.1.70.000039
ORF1ab/nsp14L4LctTctC3536Q.10.004421
ORF1ab/nsp14L4LctTctA136Q.10.000126
ORF1ab/nsp14L4FCttTtt3030B.1.617.20.000113
ORF1ab/nsp14L4LctTctA1528AY.40.000023
ORF1ab/nsp14L4LctTctC1228AY.40.000019
ORF1ab/nsp14L4LctTctG128AY.40.000002
ORF1ab/nsp14L4HcTtcAt2727All0.000005
ORF1ab/nsp14L4LctTctA1222AY.260.00034
ORF1ab/nsp14L4LctTctC1022AY.260.000283
ORF1ab/nsp14L4FCttTtt2222B.1.5260.000517
ORF1ab/nsp14L4LctTctC1721AY.1030.000106
ORF1ab/nsp14L4LctTctA421AY.1030.000025
ORF1ab/nsp14L4LctTctC1419B.1.617.20.000053
ORF1ab/nsp14L4LctTctA419B.1.617.20.000015
ORF1ab/nsp14L4LctTctG119B.1.617.20.000004
ORF1ab/nsp14L4ICttAtt1515AY.40.000023
ORF1ab/nsp14L4LctTctC1315B.10.000119
ORF1ab/nsp14L4LctTctA215B.10.000018
ORF1ab/nsp14L4delCTT---1414AY.40.000022
ORF1ab/nsp14L4LctTctA1012AY.250.00006
ORF1ab/nsp14L4LctTctC212AY.250.000012
ORF1ab/nsp14L4ICttAtt1212B.1.1.70.000011
ORF1ab/nsp14L4ICttAtt1111AY.4.50.001182
ORF1ab/nsp14L4delCTT---1010AY.230.000697
ORF1ab/nsp14L4delCTT---1010AY.430.000044
ORF1ab/nsp14L4LctTctA910AY.440.000055
ORF1ab/nsp14L4LctTctC110AY.440.000006
ORF1ab/nsp14L4FCttTtt1010B.10.000092
ORF1ab/nsp14L4LctTctA69AY.430.000027
ORF1ab/nsp14L4LctTctC39AY.430.000013
ORF1ab/nsp14L4HcTtcAt99AY.440.000055
ORF1ab/nsp14L4LctTctC69B.1.10.000109
ORF1ab/nsp14L4LctTctA29B.1.10.000036
ORF1ab/nsp14L4LctTctG19B.1.10.000018
ORF1ab/nsp14L4LctTctG49P.10.000063
ORF1ab/nsp14L4LctTctC39P.10.000047
ORF1ab/nsp14L4LctTctA29P.10.000032
ORF1ab/nsp14L4FCttTtt88AY.1050.005145
ORF1ab/nsp14L4FCttTtt88AY.1130.001139
ORF1ab/nsp14L4LctTctA78AY.1190.000247
ORF1ab/nsp14L4LctTctC18AY.1190.000035
ORF1ab/nsp14L4HcTtcAt88B.1.1.70.000007
ORF1ab/nsp14L4FCttTtt77AY.1020.000186
ORF1ab/nsp14L4delCTT---77B.1.1770.000092
ORF1ab/nsp14L4FCttTtt77Q.10.000884
ORF1ab/nsp14L4FCttTtt66AY.1030.000037
ORF1ab/nsp14L4FCttTtt66AY.250.000036
ORF1ab/nsp14L4FCttTtt66AY.390.000148
ORF1ab/nsp14L4LctTctA56AY.39.10.000198
ORF1ab/nsp14L4LctTctC16AY.39.10.00004
ORF1ab/nsp14L4delCTT---66AY.4.50.000645
ORF1ab/nsp14L4LctTctA66B.1.3240.009631
ORF1ab/nsp14L4HcTtcAt66B.1.617.20.000023
ORF1ab/nsp14L4FCttTtt55AY.200.000194
ORF1ab/nsp14L4LctTctC35AY.30.00003
ORF1ab/nsp14L4LctTctA15AY.30.00001
ORF1ab/nsp14L4LctTctG15AY.30.00001
ORF1ab/nsp14L4ICttAtt55AY.4.2.10.000745
ORF1ab/nsp14L4FCttTtt55B.1.10.000091
ORF1ab/nsp14L4ICttAtt55B.1.1770.000066
ORF1ab/nsp14L4FCttTtt55B.1.1770.000066
ORF1ab/nsp14L4LctTctA45B.1.20.000035
ORF1ab/nsp14L4LctTctG15B.1.20.000009
ORF1ab/nsp14L4FCttTtt55B.1.2580.000333
ORF1ab/nsp14L4PcTtcCt44AY.1030.000025
ORF1ab/nsp14L4LctTctA34AY.1130.000427
ORF1ab/nsp14L4LctTctC14AY.1130.000142
ORF1ab/nsp14L4ICttAtt44AY.1180.000251
ORF1ab/nsp14L4FCttTtt44AY.30.00004
ORF1ab/nsp14L4delCTT---44AY.34.10.00204
ORF1ab/nsp14L4PcTtcCt44AY.430.000018
ORF1ab/nsp14L4ICttAtt44AY.430.000018
ORF1ab/nsp14L4delCTT---44B.1.1.330.001684
ORF1ab/nsp14L4delCTT---44B.1.1.3480.003185
ORF1ab/nsp14L4LctTctC44B.1.1.4860.006309
ORF1ab/nsp14L4FCttTtt44B.1.1.5190.000159
ORF1ab/nsp14L4LctTctA24B.1.1770.000026
ORF1ab/nsp14L4LctTctC24B.1.1770.000026
ORF1ab/nsp14L4ICttAtt44B.1.80.00789
ORF1ab/nsp14L4VCttGtt33All0.000001
ORF1ab/nsp14L4LctTctC23AY.1020.000053
ORF1ab/nsp14L4LctTctA13AY.1020.000027
ORF1ab/nsp14L4LctTctC23AY.1180.000125
ORF1ab/nsp14L4LctTctA13AY.1180.000063
ORF1ab/nsp14L4FCttTtt33AY.1190.000106
ORF1ab/nsp14L4delCTT---33AY.1200.000112
ORF1ab/nsp14L4FCttTtt33AY.39.10.000119
ORF1ab/nsp14L4HcTtcAt33AY.430.000013
ORF1ab/nsp14L4ICttAtt33AY.440.000018
ORF1ab/nsp14L4LctTctA23AY.460.000208
ORF1ab/nsp14L4LctTctC13AY.460.000104
ORF1ab/nsp14L4LctTctG33AY.470.000093
ORF1ab/nsp14L4FCttTtt33AY.680.000821
ORF1ab/nsp14L4ICttAtt33AY.90.000203
ORF1ab/nsp14L4LctTctC33B.1.1280.001906
ORF1ab/nsp14L4PcTtcCt33B.1.20.000026
ORF1ab/nsp14L4FCttTtt33B.1.3510.000089
ORF1ab/nsp14L4ICttAtt33B.1.5260.000071
ORF1ab/nsp14L4ICttAtt33B.1.617.20.000011
ORF1ab/nsp14L4LctTctC33B.1.6390.065217
ORF1ab/nsp14L4FCttTtt33C.36.3.10.008152
ORF1ab/nsp14L4LctTctC33R.10.00027
ORF1ab/nsp14L4FCttTtt22A0.000774
ORF1ab/nsp14L4RcTtcGt22All0
ORF1ab/nsp14L4del2cTTc--22All0
ORF1ab/nsp14L4ICttAtt22AY.1000.000092
ORF1ab/nsp14L4LctTctA22AY.1010.000981
ORF1ab/nsp14L4delCTT---22AY.120.000632
ORF1ab/nsp14L4ICttAtt22AY.1200.000074
ORF1ab/nsp14L4ICttAtt22AY.200.000078
ORF1ab/nsp14L4ICttAtt22AY.250.000012
ORF1ab/nsp14L4LctTctC22AY.29.10.000441
ORF1ab/nsp14L4delCTT---22AY.330.000134
ORF1ab/nsp14L4LctTctC22AY.390.000049
ORF1ab/nsp14L4PcTtcCt22AY.390.000049
ORF1ab/nsp14L4PcTtcCt22AY.40.000003
ORF1ab/nsp14L4FCttTtt22AY.4.20.000043
ORF1ab/nsp14L4delCTT---22AY.4.40.000818
ORF1ab/nsp14L4LctTctC22AY.46.60.000144
ORF1ab/nsp14L4FCttTtt22AY.46.60.000144
ORF1ab/nsp14L4FCttTtt22AY.470.000062
ORF1ab/nsp14L4delCTT---22AY.50.000041
ORF1ab/nsp14L4FCttTtt22AY.50.000041
ORF1ab/nsp14L4ICttAtt22AY.510.001818
ORF1ab/nsp14L4delCTT---22AY.600.001876
ORF1ab/nsp14L4ICttAtt22AY.80.001212
ORF1ab/nsp14L4delCTT---22AY.90.000135
ORF1ab/nsp14L4LctTctA22AY.90.000135
ORF1ab/nsp14L4delCTT---22AY.9.20.000073
ORF1ab/nsp14L4ICttAtt22AY.9.20.000073
ORF1ab/nsp14L4LctTctC22AY.9.2.10.003953
ORF1ab/nsp14L4FCttTtt22AY.98.10.000097
ORF1ab/nsp14L4ICttAtt22B.10.000018
ORF1ab/nsp14L4delCTT---22B.10.000018
ORF1ab/nsp14L4PcTtcCt22B.1.10.000036
ORF1ab/nsp14L4LctTctC22B.1.1.2160.001781
ORF1ab/nsp14L4LctTctC22B.1.1.390.001019
ORF1ab/nsp14L4del2cTTc--22B.1.1.70.000002
ORF1ab/nsp14L4FCttTtt22B.1.1570.00597
ORF1ab/nsp14L4LctTctA22B.1.1600.000062
ORF1ab/nsp14L4delCTT---22B.1.177.40.000422
ORF1ab/nsp14L4delCTT---22B.1.177.570.000562
ORF1ab/nsp14L4delCTT---22B.1.177.580.002663
ORF1ab/nsp14L4LctTctC22B.1.177.810.000379
ORF1ab/nsp14L4FCttTtt22B.1.177.820.000955
ORF1ab/nsp14L4LctTctA12B.1.2320.000537
ORF1ab/nsp14L4LctTctC12B.1.2320.000537
ORF1ab/nsp14L4FCttTtt22B.1.2340.000264
ORF1ab/nsp14L4LctTctA22B.1.258.170.000208
ORF1ab/nsp14L4FCttTtt22B.1.3110.000549
ORF1ab/nsp14L4ICttAtt22B.1.351.20.000605
ORF1ab/nsp14L4PcTtcCt22B.1.360.000292
ORF1ab/nsp14L4delCTT---22B.1.360.000292
ORF1ab/nsp14L4FCttTtt22B.1.5250.000226
ORF1ab/nsp14L4PcTtcCt22B.1.617.20.000008
ORF1ab/nsp14L4LctTctC22B.60.00182
ORF1ab/nsp14L4FCttTtt22C.370.000232
ORF1ab/nsp14L4delCTT---22N.40.008511
ORF1ab/nsp14L4delCTT---22N.60.014184
ORF1ab/nsp14L4FCttTtt22P.10.000032
ORF1ab/nsp14L4delCTT---22P.20.000373
ORF1ab/nsp14L4ICttAtt11A0.000387
ORF1ab/nsp14L4delCTT---11A.10.000282
ORF1ab/nsp14L4FCttTtt11A.2.40.003367
ORF1ab/nsp14L4delCTT---11AD.20.000219
ORF1ab/nsp14L4del1cTtc-t11All0
ORF1ab/nsp14L4TCTTACG11All0
ORF1ab/nsp14L4NCTtAAt11All0
ORF1ab/nsp14L4FCttTtt11AY.1000.000046
ORF1ab/nsp14L4ICttAtt11AY.1020.000027
ORF1ab/nsp14L4ICttAtt11AY.1030.000006
ORF1ab/nsp14L4FCttTtt11AY.1110.000183
ORF1ab/nsp14L4LctTctC11AY.1140.000231
ORF1ab/nsp14L4PcTtcCt11AY.1160.000287
ORF1ab/nsp14L4delCTT---11AY.1160.000287
ORF1ab/nsp14L4LctTctA11AY.1170.000085
ORF1ab/nsp14L4FCttTtt11AY.1170.000085
ORF1ab/nsp14L4FCttTtt11AY.1180.000063
ORF1ab/nsp14L4FCttTtt11AY.1200.000037
ORF1ab/nsp14L4LctTctC11AY.1210.000135
ORF1ab/nsp14L4FCttTtt11AY.130.000161
ORF1ab/nsp14L4FCttTtt11AY.150.002222
ORF1ab/nsp14L4delCTT---11AY.190.00114
ORF1ab/nsp14L4LctTctA11AY.20.000356
ORF1ab/nsp14L4delCTT---11AY.250.000006
ORF1ab/nsp14L4FCttTtt11AY.290.000016
ORF1ab/nsp14L4LctTctA11AY.290.000016
ORF1ab/nsp14L4delCTT---11AY.30.00001
ORF1ab/nsp14L4ICttAtt11AY.30.00001
ORF1ab/nsp14L4LctTctA11AY.320.000532
ORF1ab/nsp14L4VCttGtt11AY.330.000067
ORF1ab/nsp14L4LctTctC11AY.330.000067
ORF1ab/nsp14L4LctTctC11AY.340.000097
ORF1ab/nsp14L4ICttAtt11AY.360.000148
ORF1ab/nsp14L4delCTT---11AY.380.000499
ORF1ab/nsp14L4PcTtcCt11AY.4.20.000022
ORF1ab/nsp14L4FCttTtt11AY.4.2.10.000149
ORF1ab/nsp14L4LctTctA11AY.4.2.10.000149
ORF1ab/nsp14L4delCTT---11AY.410.000294
ORF1ab/nsp14L4LctTctA11AY.420.00004
ORF1ab/nsp14L4PcTtcCt11AY.440.000006
ORF1ab/nsp14L4delCTT---11AY.450.000122
ORF1ab/nsp14L4delCTT---11AY.460.000104
ORF1ab/nsp14L4delCTT---11AY.46.20.000635
ORF1ab/nsp14L4FCttTtt11AY.46.40.000165
ORF1ab/nsp14L4PcTtcCt11AY.46.50.000198
ORF1ab/nsp14L4ICttAtt11AY.520.000814
ORF1ab/nsp14L4LctTctA11AY.540.000095
ORF1ab/nsp14L4ICttAtt11AY.580.000907
ORF1ab/nsp14L4TCTTACG11AY.590.00053
ORF1ab/nsp14L4LctTctC11AY.590.00053
ORF1ab/nsp14L4FCttTtt11AY.60.000041
ORF1ab/nsp14L4delCTT---11AY.60.000041
ORF1ab/nsp14L4LctTctA11AY.60.000041
ORF1ab/nsp14L4PcTTcCC11AY.620.000436
ORF1ab/nsp14L4LctTctA11AY.650.000533
ORF1ab/nsp14L4delCTT---11AY.680.000274
ORF1ab/nsp14L4FCttTtt11AY.690.000187
ORF1ab/nsp14L4FCttTtt11AY.720.001361
ORF1ab/nsp14L4LctTctC11AY.740.000116
ORF1ab/nsp14L4delCTT---11AY.75.10.00018
ORF1ab/nsp14L4del1cTtc-t11AY.790.001211
ORF1ab/nsp14L4ICttAtt11AY.870.000833
ORF1ab/nsp14L4FCttTtt11AY.90.000068
ORF1ab/nsp14L4delCTT---11AY.9.10.000084
ORF1ab/nsp14L4LctTctA11AY.9.20.000037
ORF1ab/nsp14L4delCTT---11AY.940.000443
ORF1ab/nsp14L4delCTT---11AY.950.000761
ORF1ab/nsp14L4FCttTtt11AY.980.000079
ORF1ab/nsp14L4LctTctC11AY.980.000079
ORF1ab/nsp14L4delCTT---11AY.98.10.000048
ORF1ab/nsp14L4FCttTtt11AY.99.20.000092
ORF1ab/nsp14L4ICttAtt11AY.99.20.000092
ORF1ab/nsp14L4FCttTtt11B0.000128
ORF1ab/nsp14L4ICttAtt11B0.000128
ORF1ab/nsp14L4PcTtcCt11B0.000128
ORF1ab/nsp14L4LctTctC11B0.000128
ORF1ab/nsp14L4delCTT---11B.1.10.000018
ORF1ab/nsp14L4NCTtAAt11B.1.10.000018
ORF1ab/nsp14L4LctTctC11B.1.1.1580.012195
ORF1ab/nsp14L4LctTctC11B.1.1.2220.000204
ORF1ab/nsp14L4delCTT---11B.1.1.2320.001815
ORF1ab/nsp14L4FCttTtt11B.1.1.2650.003155
ORF1ab/nsp14L4LctTctC11B.1.1.2690.001353
ORF1ab/nsp14L4FCttTtt11B.1.1.280.000311
ORF1ab/nsp14L4LctTctA11B.1.1.3020.002075
ORF1ab/nsp14L4PcTtcCt11B.1.1.3060.000438
ORF1ab/nsp14L4FCttTtt11B.1.1.3110.000358
ORF1ab/nsp14L4delCTT---11B.1.1.3110.000358
ORF1ab/nsp14L4delCTT---11B.1.1.3120.001912
ORF1ab/nsp14L4FCttTtt11B.1.1.3120.001912
ORF1ab/nsp14L4delCTT---11B.1.1.3220.008772
ORF1ab/nsp14L4PcTtcCt11B.1.1.3680.003086
ORF1ab/nsp14L4delCTT---11B.1.1.370.000193
ORF1ab/nsp14L4LctTctA11B.1.1.3720.000689
ORF1ab/nsp14L4delCTT---11B.1.1.390.00051
ORF1ab/nsp14L4delCTT---11B.1.1.4090.002833
ORF1ab/nsp14L4VCttGtt11B.1.1.4200.001006
ORF1ab/nsp14L4LctTctC11B.1.1.700.000341
ORF1ab/nsp14L4RcTtcGt11B.1.1600.000031
ORF1ab/nsp14L4FCttTtt11B.1.1600.000031
ORF1ab/nsp14L4delCTT---11B.1.1600.000031
ORF1ab/nsp14L4PcTtcCt11B.1.1700.00431
ORF1ab/nsp14L4PcTtcCt11B.1.1770.000013
ORF1ab/nsp14L4HcTtcAt11B.1.1770.000013
ORF1ab/nsp14L4FCttTtt11B.1.177.100.000878
ORF1ab/nsp14L4delCTT---11B.1.177.170.000821
ORF1ab/nsp14L4delCTT---11B.1.177.180.00116
ORF1ab/nsp14L4PcTTcCC11B.1.177.430.001477
ORF1ab/nsp14L4delCTT---11B.1.177.560.000668
ORF1ab/nsp14L4delCTT---11B.1.177.630.002703
ORF1ab/nsp14L4LctTctG11B.1.177.70.000165
ORF1ab/nsp14L4LctTctA11B.1.177.730.000566
ORF1ab/nsp14L4delCTT---11B.1.177.870.000728
ORF1ab/nsp14L4delCTT---11B.1.177.90.001332
ORF1ab/nsp14L4FCttTtt11B.1.20.000009
ORF1ab/nsp14L4ICttAtt11B.1.20.000009
ORF1ab/nsp14L4delCTT---11B.1.20.000009
ORF1ab/nsp14L4LctTctC11B.1.221.10.002907
ORF1ab/nsp14L4FCttTtt11B.1.2390.001221
ORF1ab/nsp14L4LctTctA11B.1.2580.000067
ORF1ab/nsp14L4delCTT---11B.1.2580.000067
ORF1ab/nsp14L4delCTT---11B.1.258.30.001675
ORF1ab/nsp14L4ICttAtt11B.1.258.40.003448
ORF1ab/nsp14L4ICttAtt11B.1.3010.005917
ORF1ab/nsp14L4VCttGtt11B.1.3200.001245
ORF1ab/nsp14L4LctTctC11B.1.3200.001245
ORF1ab/nsp14L4LctTctG11B.1.3290.000608
ORF1ab/nsp14L4RcTtcGt11B.1.3320.003497
ORF1ab/nsp14L4FCttTtt11B.1.351.20.000303
ORF1ab/nsp14L4FCttTtt11B.1.351.30.000876
ORF1ab/nsp14L4FCttTtt11B.1.36.180.00042
ORF1ab/nsp14L4delCTT---11B.1.36.180.00042
ORF1ab/nsp14L4FCttTtt11B.1.36.80.001
ORF1ab/nsp14L4FCttTtt11B.1.3670.000792
ORF1ab/nsp14L4LctTctG11B.1.3980.002976
ORF1ab/nsp14L4delCTT---11B.1.4160.001269
ORF1ab/nsp14L4FCttTtt11B.1.4270.00005
ORF1ab/nsp14L4PcTtcCt11B.1.4290.000024
ORF1ab/nsp14L4delCTT---11B.1.4290.000024
ORF1ab/nsp14L4FCttTtt11B.1.4290.000024
ORF1ab/nsp14L4LctTctC11B.1.466.20.000391
ORF1ab/nsp14L4FCttTtt11B.1.466.20.000391
ORF1ab/nsp14L4LctTctA11B.1.4740.001901
ORF1ab/nsp14L4LctTctC11B.1.4990.00105
ORF1ab/nsp14L4PcTtcCt11B.1.5250.000113
ORF1ab/nsp14L4PcTtcCt11B.1.5260.000024
ORF1ab/nsp14L4FCttTtt11B.1.5610.000397
ORF1ab/nsp14L4LctTctA11B.1.5650.00081
ORF1ab/nsp14L4LctTctA11B.1.5770.000687
ORF1ab/nsp14L4LctTctC11B.1.5800.004065
ORF1ab/nsp14L4PcTtcCt11B.1.5960.000087
ORF1ab/nsp14L4ICttAtt11B.1.617.10.000129
ORF1ab/nsp14L4delCTT---11B.1.617.20.000004
ORF1ab/nsp14L4FCttTtt11B.1.6210.000089
ORF1ab/nsp14L4FCttTtt11B.1.6230.000536
ORF1ab/nsp14L4delCTT---11C.350.000774
ORF1ab/nsp14L4PcTtcCt11N.40.004255
ORF1ab/nsp14L4PcTtcCt11P.10.000016
ORF1ab/nsp14L4FCttTtt11P.1.10.000318
ORF1ab/nsp14L4FCttTtt11P.1.170.000162
ORF1ab/nsp14L4PcTtcCt11P.1.70.000319
ORF1ab/nsp14L4PcTTcCA11P.20.000187
ORF1ab/nsp14L4ICttAtt11P.20.000187

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.