CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 27 & Codon = ctT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp127L27LL27LsynctCctT17503173990.994058344-346

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp127L27LctCctT1739917503All0.003328
ORF1ab/nsp127L27LctCctT61146114P.1.170.989
ORF1ab/nsp127L27LctCctT14811487B.1.1.70.001326
ORF1ab/nsp127L27LctCctT13731373AY.640.817262
ORF1ab/nsp127L27LctCctT11391139P.1.17.10.9965
ORF1ab/nsp127L27LctCctT10161018B.1.1600.031687
ORF1ab/nsp127L27LctCctT564564AY.430.002499
ORF1ab/nsp127L27LctCctT545552AY.1030.003384
ORF1ab/nsp127L27LctCctT505509AY.40.000786
ORF1ab/nsp127L27LctCctT415419B.10.003801
ORF1ab/nsp127L27LctCctT413418B.1.617.20.001555
ORF1ab/nsp127L27LctCctT265265B.1.2430.01844
ORF1ab/nsp127L27LctCctT260260AY.440.001583
ORF1ab/nsp127L27LctCctT215217B.1.20.001893
ORF1ab/nsp127L27LctCctT194197P.10.003056
ORF1ab/nsp127L27LctCctT158158B.1.9.40.969325
ORF1ab/nsp127L27LctCctT143143AY.620.062309
ORF1ab/nsp127L27LctCctT132133AY.390.003262
ORF1ab/nsp127L27LctCctT103103B.1.4270.005201
ORF1ab/nsp127L27LctCctT9396B.1.10.001687
ORF1ab/nsp127L27LctCctT9494AY.30.000935
ORF1ab/nsp127L27LctCctT7880AY.250.000469
ORF1ab/nsp127L27LctCctT7474B.1.1.4340.025793
ORF1ab/nsp127L27LctCctT7272AY.1190.002542
ORF1ab/nsp127L27LctCctT6969AE.80.033741
ORF1ab/nsp127L27LctCctT6262AY.260.001755
ORF1ab/nsp127L27LctCctT5757B.1.2340.007521
ORF1ab/nsp127L27LctCctT4651B.1.1770.000606
ORF1ab/nsp127L27LctCctT4747AY.1020.001246
ORF1ab/nsp127L27LctCctT4646AY.9.10.003851
ORF1ab/nsp127L27LctCctT4343AY.750.002409
ORF1ab/nsp127L27LctCctT4141AY.46.60.002961
ORF1ab/nsp127L27LctCctT4141B.1.3110.011258
ORF1ab/nsp127L27LctCctT3939B.1.4290.000918
ORF1ab/nsp127L27LctCctT3838AY.1000.001748
ORF1ab/nsp127L27LctCctT3838AY.9.20.001396
ORF1ab/nsp127L27LctCctT3535AY.1180.002193
ORF1ab/nsp127L27LctCctT3435AY.290.000536
ORF1ab/nsp127L27LctCctT3434AY.4.20.000737
ORF1ab/nsp127L27LctCctT129AY.340.000097
ORF1ab/nsp127L27LctCctT2929P.40.110266
ORF1ab/nsp127L27LctCctT2427AY.60.000987
ORF1ab/nsp127L27LctCctT2525AY.1210.003383
ORF1ab/nsp127L27LctCctT2325AY.50.000475
ORF1ab/nsp127L27LctCctT2525AY.980.001975
ORF1ab/nsp127L27LctCctT2525B.1.177.480.078125
ORF1ab/nsp127L27LctCctT2325B.1.3510.000684
ORF1ab/nsp127L27LctCctT2525C.160.026511
ORF1ab/nsp127L27LctCctT2424C.36.30.013613
ORF1ab/nsp127L27LctCctT2323B.1.1.5190.000913
ORF1ab/nsp127L27LctCctT2222P.1.160.00823
ORF1ab/nsp127L27LctCctT1919AZ.20.015599
ORF1ab/nsp127L27LctCctT1919B.1.1.670.086758
ORF1ab/nsp127L27LctCctT1818AY.1170.001521
ORF1ab/nsp127L27LctCctT1717B.1.5260.0004
ORF1ab/nsp127L27LctCctT1616AY.420.000644
ORF1ab/nsp127L27LctCctT1616AY.650.008529
ORF1ab/nsp127L27LctCctT1116B.1.1.280.003424
ORF1ab/nsp127L27LctCctT1515B.1.177.810.00284
ORF1ab/nsp127L27LctCctT1515B.1.360.002189
ORF1ab/nsp127L27LctCctT1414AY.1130.001993
ORF1ab/nsp127L27LctCctT1414AY.200.000544
ORF1ab/nsp127L27LctCctT1313A.2.50.006487
ORF1ab/nsp127L27LctCctT1213AY.330.000801
ORF1ab/nsp127L27LctCctT1313AY.99.20.001198
ORF1ab/nsp127L27LctCctT1313B.1.1.2140.000721
ORF1ab/nsp127L27LctCctT1313B.1.177.70.002143
ORF1ab/nsp127L27LctCctT1313B.1.6210.001151
ORF1ab/nsp127L27LctCctT1313C.370.001509
ORF1ab/nsp127L27LctCctT1212A.2.40.040404
ORF1ab/nsp127L27LctCctT1112AY.230.000767
ORF1ab/nsp127L27LctCctT1212AY.610.001257
ORF1ab/nsp127L27LctCctT1212B.1.5250.001358
ORF1ab/nsp127L27LctCctT1212P.1.10.003812
ORF1ab/nsp127L27LctCctT1111AY.1160.003155
ORF1ab/nsp127L27LctCctT1111AY.140.000968
ORF1ab/nsp127L27LctCctT1111AY.7.20.006152
ORF1ab/nsp127L27LctCctT1111B.1.1.2220.002244
ORF1ab/nsp127L27LctCctT1111B.1.177.860.002018
ORF1ab/nsp127L27LctCctT1111B.1.36.290.005691
ORF1ab/nsp127L27LctCctT1010B.1.466.20.003912
ORF1ab/nsp127L27LctCctT1010Q.10.001263
ORF1ab/nsp127L27LctCctT99AY.350.002097
ORF1ab/nsp127L27LctCctT99AY.470.00028
ORF1ab/nsp127L27LctCctT99AY.98.10.000436
ORF1ab/nsp127L27LctCctT99B.1.1110.010576
ORF1ab/nsp127L27LctCctT99B.1.4740.01711
ORF1ab/nsp127L27LctCctT99B.1.6370.000658
ORF1ab/nsp127L27LctCctT99D.20.000675
ORF1ab/nsp127L27LctCctT99P.1.150.002091
ORF1ab/nsp127L27LctCctT88AY.130.001288
ORF1ab/nsp127L27LctCctT88B.1.2210.000568
ORF1ab/nsp127L27LctCctT88B.1.90.049383
ORF1ab/nsp127L27LctCctT88P.1.140.000382
ORF1ab/nsp127L27LctCctT88P.1.60.015564
ORF1ab/nsp127L27LctCctT67B0.000767
ORF1ab/nsp127L27LctCctT77B.1.1390.005132
ORF1ab/nsp127L27LctCctT77B.1.177.540.004245
ORF1ab/nsp127L27LctCctT77B.1.2410.005682
ORF1ab/nsp127L27LctCctT77B.1.2580.000466
ORF1ab/nsp127L27LctCctT77B.1.3490.005004
ORF1ab/nsp127L27LctCctT77B.1.5950.001827
ORF1ab/nsp127L27LctCctT77B.1.5960.00061
ORF1ab/nsp127L27LctCctT77N.50.012367
ORF1ab/nsp127L27LctCctT66AY.120.001896
ORF1ab/nsp127L27LctCctT66AY.120.10.001926
ORF1ab/nsp127L27LctCctT66AY.39.10.000238
ORF1ab/nsp127L27LctCctT66AY.5.30.002024
ORF1ab/nsp127L27LctCctT66AY.540.000572
ORF1ab/nsp127L27LctCctT66B.1.1.3170.00247
ORF1ab/nsp127L27LctCctT66B.1.1.3970.013514
ORF1ab/nsp127L27LctCctT66B.1.5170.002562
ORF1ab/nsp127L27LctCctT66P.20.00112
ORF1ab/nsp127L27LctCctT55AD.20.001095
ORF1ab/nsp127L27LctCctT55AY.240.002155
ORF1ab/nsp127L27LctCctT55AY.850.002136
ORF1ab/nsp127L27LctCctT55B.1.1.2940.006329
ORF1ab/nsp127L27LctCctT55B.1.1.3040.014045
ORF1ab/nsp127L27LctCctT55B.1.177.570.001405
ORF1ab/nsp127L27LctCctT25B.1.177.730.001133
ORF1ab/nsp127L27LctCctT44A.210.01108
ORF1ab/nsp127L27LctCctT44A.290.021277
ORF1ab/nsp127L27LctCctT44AY.1200.000149
ORF1ab/nsp127L27LctCctT44AY.220.008368
ORF1ab/nsp127L27LctCctT44AY.3.10.000341
ORF1ab/nsp127L27LctCctT44AY.34.10.00204
ORF1ab/nsp127L27LctCctT44AY.590.002119
ORF1ab/nsp127L27LctCctT44AY.75.10.000721
ORF1ab/nsp127L27LctCctT44B.1.1.1530.004381
ORF1ab/nsp127L27LctCctT44B.1.1.2010.097561
ORF1ab/nsp127L27LctCctT44B.1.1.2840.00043
ORF1ab/nsp127L27LctCctT44B.1.1.2850.026144
ORF1ab/nsp127L27LctCctT44B.1.1.3180.001207
ORF1ab/nsp127L27LctCctT44B.1.1.4640.005891
ORF1ab/nsp127L27LctCctT44B.1.1.5260.014184
ORF1ab/nsp127L27LctCctT44B.1.177.450.001525
ORF1ab/nsp127L27LctCctT44B.1.177.790.009368
ORF1ab/nsp127L27LctCctT44B.1.2400.000862
ORF1ab/nsp127L27LctCctT44B.1.36.170.001976
ORF1ab/nsp127L27LctCctT44B.1.36.360.002408
ORF1ab/nsp127L27LctCctT44B.1.3670.00317
ORF1ab/nsp127L27LctCctT44B.1.4250.011976
ORF1ab/nsp127L27LctCctT44B.1.5750.001214
ORF1ab/nsp127L27LctCctT34P.1.130.002695
ORF1ab/nsp127L27LctCctT44Q.80.00066
ORF1ab/nsp127L27LctCctT44R.10.00036
ORF1ab/nsp127L27LctCctT33AY.1050.001929
ORF1ab/nsp127L27LctCctT33AY.160.001139
ORF1ab/nsp127L27LctCctT33AY.450.000365
ORF1ab/nsp127L27LctCctT33AY.460.000312
ORF1ab/nsp127L27LctCctT33AY.46.40.000494
ORF1ab/nsp127L27LctCctT33AY.670.001393
ORF1ab/nsp127L27LctCctT33AY.7.10.000338
ORF1ab/nsp127L27LctCctT33AY.740.000347
ORF1ab/nsp127L27LctCctT33AY.760.014493
ORF1ab/nsp127L27LctCctT33B.1.1.2070.003546
ORF1ab/nsp127L27LctCctT33B.1.1.4160.002715
ORF1ab/nsp127L27LctCctT33B.1.1.4530.025424
ORF1ab/nsp127L27LctCctT33B.1.177.40.000633
ORF1ab/nsp127L27LctCctT33B.1.177.600.000655
ORF1ab/nsp127L27LctCctT33B.1.3240.004815
ORF1ab/nsp127L27LctCctT33B.1.4090.002344
ORF1ab/nsp127L27LctCctT23B.1.5380.016129
ORF1ab/nsp127L27LctCctT23B.1.5640.000852
ORF1ab/nsp127L27LctCctT33B.1.9.50.017045
ORF1ab/nsp127L27LctCctT33P.1.100.000808
ORF1ab/nsp127L27LctCctT12A0.000387
ORF1ab/nsp127L27LctCctT22AY.1010.000981
ORF1ab/nsp127L27LctCctT22AY.1070.000932
ORF1ab/nsp127L27LctCctT12AY.116.10.000311
ORF1ab/nsp127L27LctCctT22AY.370.000632
ORF1ab/nsp127L27LctCctT22AY.4.2.10.000298
ORF1ab/nsp127L27LctCctT22AY.550.001835
ORF1ab/nsp127L27LctCctT22AY.600.001876
ORF1ab/nsp127L27LctCctT22AY.710.00095
ORF1ab/nsp127L27LctCctT22AY.840.000875
ORF1ab/nsp127L27LctCctT22AY.90.000135
ORF1ab/nsp127L27LctCctT22AY.900.001369
ORF1ab/nsp127L27LctCctT22AY.930.000546
ORF1ab/nsp127L27LctCctT22AY.990.002099
ORF1ab/nsp127L27LctCctT22B.1.1.10.000653
ORF1ab/nsp127L27LctCctT22B.1.1.2050.007435
ORF1ab/nsp127L27LctCctT22B.1.1.250.001137
ORF1ab/nsp127L27LctCctT22B.1.1.3060.000877
ORF1ab/nsp127L27LctCctT22B.1.1.3680.006173
ORF1ab/nsp127L27LctCctT12B.1.1.370.000193
ORF1ab/nsp127L27LctCctT22B.1.1.3720.001377
ORF1ab/nsp127L27LctCctT22B.1.1.500.001358
ORF1ab/nsp127L27LctCctT22B.1.1.630.000772
ORF1ab/nsp127L27LctCctT22B.1.1470.001512
ORF1ab/nsp127L27LctCctT12B.1.177.210.000076
ORF1ab/nsp127L27LctCctT22B.1.36.310.003503
ORF1ab/nsp127L27LctCctT22B.1.36.80.002
ORF1ab/nsp127L27LctCctT22B.1.3620.003082
ORF1ab/nsp127L27LctCctT22B.1.3690.00057
ORF1ab/nsp127L27LctCctT22B.1.4200.020833
ORF1ab/nsp127L27LctCctT22B.1.438.10.000215
ORF1ab/nsp127L27LctCctT22B.1.5820.000981
ORF1ab/nsp127L27LctCctT22B.1.617.10.000258
ORF1ab/nsp127L27LctCctT22B.1.6380.105263
ORF1ab/nsp127L27LctCctT22B.30.001661
ORF1ab/nsp127L27LctCctT22C.1.20.008511
ORF1ab/nsp127L27LctCctT22C.260.014706
ORF1ab/nsp127L27LctCctT22C.40.02
ORF1ab/nsp127L27LctCctT12P.1.70.000319
ORF1ab/nsp127L27LctCctT11A.10.000282
ORF1ab/nsp127L27LctCctT11A.2.5.20.001572
ORF1ab/nsp127L27LctCctT11AU.30.00211
ORF1ab/nsp127L27LctCctT11AY.100.00053
ORF1ab/nsp127L27LctCctT11AY.1060.000335
ORF1ab/nsp127L27LctCctT11AY.1080.001103
ORF1ab/nsp127L27LctCctT11AY.1090.00074
ORF1ab/nsp127L27LctCctT11AY.1100.000113
ORF1ab/nsp127L27LctCctT11AY.1110.000183
ORF1ab/nsp127L27LctCctT11AY.1140.000231
ORF1ab/nsp127L27LctCctT11AY.16.10.00047
ORF1ab/nsp127L27LctCctT11AY.270.000065
ORF1ab/nsp127L27LctCctT11AY.29.10.000221
ORF1ab/nsp127L27LctCctT11AY.300.000396
ORF1ab/nsp127L27LctCctT11AY.320.000532
ORF1ab/nsp127L27LctCctT11AY.360.000148
ORF1ab/nsp127L27LctCctT11AY.4.50.000107
ORF1ab/nsp127L27LctCctT11AY.400.000964
ORF1ab/nsp127L27LctCctT11AY.480.000465
ORF1ab/nsp127L27LctCctT11AY.5.40.000277
ORF1ab/nsp127L27LctCctT11AY.530.000288
ORF1ab/nsp127L27LctCctT11AY.560.001605
ORF1ab/nsp127L27LctCctT11AY.580.000907
ORF1ab/nsp127L27LctCctT11AY.70.000196
ORF1ab/nsp127L27LctCctT11AY.700.000209
ORF1ab/nsp127L27LctCctT11AY.720.001361
ORF1ab/nsp127L27LctCctT11AY.730.000665
ORF1ab/nsp127L27LctCctT11AY.790.001211
ORF1ab/nsp127L27LctCctT11AY.830.001724
ORF1ab/nsp127L27LctCctT11AY.870.000833
ORF1ab/nsp127L27LctCctT11AY.910.00073
ORF1ab/nsp127L27LctCctT11AY.920.000287
ORF1ab/nsp127L27LctCctT11AY.950.000761
ORF1ab/nsp127L27LctCctT11AY.960.002075
ORF1ab/nsp127L27LctCctT11B.1.1.1610.003534
ORF1ab/nsp127L27LctCctT11B.1.1.1700.001247
ORF1ab/nsp127L27LctCctT11B.1.1.1760.000439
ORF1ab/nsp127L27LctCctT11B.1.1.1980.001468
ORF1ab/nsp127L27LctCctT11B.1.1.2290.005747
ORF1ab/nsp127L27LctCctT11B.1.1.2420.043478
ORF1ab/nsp127L27LctCctT11B.1.1.2740.005051
ORF1ab/nsp127L27LctCctT11B.1.1.2770.000759
ORF1ab/nsp127L27LctCctT11B.1.1.3260.001761
ORF1ab/nsp127L27LctCctT11B.1.1.3280.016949
ORF1ab/nsp127L27LctCctT11B.1.1.3290.003846
ORF1ab/nsp127L27LctCctT11B.1.1.3440.010753
ORF1ab/nsp127L27LctCctT11B.1.1.3700.012658
ORF1ab/nsp127L27LctCctT11B.1.1.3730.02381
ORF1ab/nsp127L27LctCctT11B.1.1.3890.006061
ORF1ab/nsp127L27LctCctT11B.1.1.390.00051
ORF1ab/nsp127L27LctCctT11B.1.1.4040.015873
ORF1ab/nsp127L27LctCctT11B.1.1.4110.014706
ORF1ab/nsp127L27LctCctT11B.1.1.4200.001006
ORF1ab/nsp127L27LctCctT11B.1.1.4660.008696
ORF1ab/nsp127L27LctCctT11B.1.1.4860.001577
ORF1ab/nsp127L27LctCctT11B.1.1.510.001718
ORF1ab/nsp127L27LctCctT11B.1.1100.004525
ORF1ab/nsp127L27LctCctT11B.1.1420.002899
ORF1ab/nsp127L27LctCctT11B.1.160.120.00641
ORF1ab/nsp127L27LctCctT11B.1.160.150.00495
ORF1ab/nsp127L27LctCctT11B.1.160.210.020408
ORF1ab/nsp127L27LctCctT11B.1.160.280.002924
ORF1ab/nsp127L27LctCctT11B.1.177.180.00116
ORF1ab/nsp127L27LctCctT11B.1.177.560.000668
ORF1ab/nsp127L27LctCctT11B.1.177.60.000977
ORF1ab/nsp127L27LctCctT11B.1.177.630.002703
ORF1ab/nsp127L27LctCctT11B.1.177.700.005917
ORF1ab/nsp127L27LctCctT11B.1.177.750.001041
ORF1ab/nsp127L27LctCctT11B.1.177.870.000728
ORF1ab/nsp127L27LctCctT11B.1.1790.003759
ORF1ab/nsp127L27LctCctT11B.1.1810.019608
ORF1ab/nsp127L27LctCctT11B.1.1900.01
ORF1ab/nsp127L27LctCctT11B.1.2060.000816
ORF1ab/nsp127L27LctCctT11B.1.2360.002053
ORF1ab/nsp127L27LctCctT11B.1.2450.03125
ORF1ab/nsp127L27LctCctT11B.1.2650.001271
ORF1ab/nsp127L27LctCctT11B.1.3440.008197
ORF1ab/nsp127L27LctCctT11B.1.351.20.000303
ORF1ab/nsp127L27LctCctT11B.1.3560.001727
ORF1ab/nsp127L27LctCctT11B.1.36.10.00114
ORF1ab/nsp127L27LctCctT11B.1.36.220.001208
ORF1ab/nsp127L27LctCctT11B.1.3900.010638
ORF1ab/nsp127L27LctCctT11B.1.3960.000706
ORF1ab/nsp127L27LctCctT11B.1.3980.002976
ORF1ab/nsp127L27LctCctT11B.1.3990.001934
ORF1ab/nsp127L27LctCctT11B.1.4000.000429
ORF1ab/nsp127L27LctCctT11B.1.4530.003236
ORF1ab/nsp127L27LctCctT11B.1.4660.023256
ORF1ab/nsp127L27LctCctT11B.1.4970.000315
ORF1ab/nsp127L27LctCctT11B.1.4990.00105
ORF1ab/nsp127L27LctCctT11B.1.5090.000866
ORF1ab/nsp127L27LctCctT11B.1.5210.004975
ORF1ab/nsp127L27LctCctT11B.1.5230.002451
ORF1ab/nsp127L27LctCctT11B.1.5370.02
ORF1ab/nsp127L27LctCctT11B.1.5510.00129
ORF1ab/nsp127L27LctCctT11B.1.5610.000397
ORF1ab/nsp127L27LctCctT11B.1.5760.000907
ORF1ab/nsp127L27LctCctT11B.1.5800.004065
ORF1ab/nsp127L27LctCctT11B.1.5870.001898
ORF1ab/nsp127L27LctCctT11B.1.6020.006536
ORF1ab/nsp127L27LctCctT11B.1.6090.000479
ORF1ab/nsp127L27LctCctT11B.1.6250.002353
ORF1ab/nsp127L27LctCctT11B.1.6280.000352
ORF1ab/nsp127L27LctCctT11B.380.02381
ORF1ab/nsp127L27LctCctT11B.4.80.071429
ORF1ab/nsp127L27LctCctT11B.400.000364
ORF1ab/nsp127L27LctCctT11C.350.000774
ORF1ab/nsp127L27LctCctT11C.360.000911
ORF1ab/nsp127L27LctCctT11C.37.10.002618
ORF1ab/nsp127L27LctCctT11P.1.80.004785
ORF1ab/nsp127L27LctCctT11Q.70.001111