CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp1 : CodonNum = 175 & Codon = cgC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1175R175RR175RsyncgTcgC12378850.715441788-790

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1175R175RcgTcgC8851237All0.000169
ORF1ab/nsp1175R175RcgTcgC86218AY.40.000134
ORF1ab/nsp1175R175RcgTcgC163163B.1.4690.588448
ORF1ab/nsp1175R175RcgTcgC71125B.1.1.70.000064
ORF1ab/nsp1175R175RcgTcgC111111AY.440.000676
ORF1ab/nsp1175R175RcgTcgC106106AY.1000.004877
ORF1ab/nsp1175R175RcgTcgC594B.1.1.2140.000277
ORF1ab/nsp1175R175RcgTcgC6666AY.1020.00175
ORF1ab/nsp1175R175RcgTcgC5458B.1.617.20.000203
ORF1ab/nsp1175R175RcgTcgC5455AY.850.023067
ORF1ab/nsp1175R175RcgTcgC3638B.1.20.000317
ORF1ab/nsp1175R175RcgTcgC215AY.4.20.000043
ORF1ab/nsp1175R175RcgTcgC1313B.1.4290.000306
ORF1ab/nsp1175R175RcgTcgC811AY.1030.00005
ORF1ab/nsp1175R175RcgTcgC610AY.430.000027
ORF1ab/nsp1175R175RcgTcgC110AY.50.000021
ORF1ab/nsp1175R175RcgTcgC710B.1.1770.000092
ORF1ab/nsp1175R175RcgTcgC88C.36.10.033195
ORF1ab/nsp1175R175RcgTcgC88P.10.000126
ORF1ab/nsp1175R175RcgTcgC67AY.30.00006
ORF1ab/nsp1175R175RcgTcgC26AY.90.000135
ORF1ab/nsp1175R175RcgTcgC55B.1.5430.05
ORF1ab/nsp1175R175RcgTcgC24AY.1200.000074
ORF1ab/nsp1175R175RcgTcgC44AY.250.000024
ORF1ab/nsp1175R175RcgTcgC24AY.60.000082
ORF1ab/nsp1175R175RcgTcgC44B.1.160.100.032258
ORF1ab/nsp1175R175RcgTcgC44B.1.617.10.000516
ORF1ab/nsp1175R175RcgTcgC33AY.390.000074
ORF1ab/nsp1175R175RcgTcgC13AY.98.10.000048
ORF1ab/nsp1175R175RcgTcgC33B.10.000027
ORF1ab/nsp1175R175RcgTcgC33B.1.36.270.00229
ORF1ab/nsp1175R175RcgTcgC33B.1.4620.021739
ORF1ab/nsp1175R175RcgTcgC22AY.1190.000071
ORF1ab/nsp1175R175RcgTcgC22AY.290.000032
ORF1ab/nsp1175R175RcgTcgC22AY.460.000208
ORF1ab/nsp1175R175RcgTcgC22AY.470.000062
ORF1ab/nsp1175R175RcgTcgC22AY.530.000575
ORF1ab/nsp1175R175RcgTcgC22AY.840.000875
ORF1ab/nsp1175R175RcgTcgC12B.1.10.000018
ORF1ab/nsp1175R175RcgTcgC22B.1.160.260.004843
ORF1ab/nsp1175R175RcgTcgC12B.1.2580.000067
ORF1ab/nsp1175R175RcgTcgC11AY.1070.000466
ORF1ab/nsp1175R175RcgTcgC11AY.1080.001103
ORF1ab/nsp1175R175RcgTcgC11AY.1210.000135
ORF1ab/nsp1175R175RcgTcgC11AY.140.000088
ORF1ab/nsp1175R175RcgTcgC11AY.260.000028
ORF1ab/nsp1175R175RcgTcgC11AY.340.000097
ORF1ab/nsp1175R175RcgTcgC11AY.4.50.000107
ORF1ab/nsp1175R175RcgTcgC11AY.46.40.000165
ORF1ab/nsp1175R175RcgTcgC11AY.550.000917
ORF1ab/nsp1175R175RcgTcgC11AY.710.000475
ORF1ab/nsp1175R175RcgTcgC11AY.9.10.000084
ORF1ab/nsp1175R175RcgTcgC11AY.920.000287
ORF1ab/nsp1175R175RcgTcgC11B.1.1.5190.00004
ORF1ab/nsp1175R175RcgTcgC11B.1.1.700.000341
ORF1ab/nsp1175R175RcgTcgC11B.1.177.540.000606
ORF1ab/nsp1175R175RcgTcgC11B.1.2400.000216
ORF1ab/nsp1175R175RcgTcgC11B.1.3510.00003
ORF1ab/nsp1175R175RcgTcgC11B.1.4270.00005
ORF1ab/nsp1175R175RcgTcgC11B.1.5250.000113
ORF1ab/nsp1175R175RcgTcgC11C.370.000116
ORF1ab/nsp1175R175RcgTcgC11P.1.130.000898
ORF1ab/nsp1175R175RcgTcgC11R.10.00009